RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 LRRC37A5PQ49AS3 106 aa9.44□□□□□ -0.9
SMARCA4-206ENST00000538456 IBA57Q5T440 356 aaKnown RBP9.44□□□□□ -0.9
SMARCA4-206ENST00000538456 MIC13Q5XKP0 118 aa9.44□□□□□ -0.9
SMARCA4-206ENST00000538456 Q6ZQT7 251 aa9.44□□□□□ -0.9
SMARCA4-206ENST00000538456 THAP6Q8TBB0 222 aa9.44□□□□□ -0.9
SMARCA4-206ENST00000538456 TMEM70Q9BUB7 260 aa9.44□□□□□ -0.9
SMARCA4-206ENST00000538456 DNAJC4Q9NNZ3 241 aa9.44□□□□□ -0.9
SMARCA4-206ENST00000538456 GSKIPQ9P0R6 139 aa9.44□□□□□ -0.9
SMARCA4-206ENST00000538456 UBR4Q5T4S7 5183 aa9.44□□□□□ -0.9
SMARCA4-206ENST00000538456 FXYD6-FXYD2A0A087WZ82 144 aa9.43□□□□□ -0.9
SMARCA4-206ENST00000538456 TRGV4A0A0C4DH28 118 aa9.43□□□□□ -0.9
SMARCA4-206ENST00000538456 K7EQD1 137 aa9.43□□□□□ -0.9
SMARCA4-206ENST00000538456 CRYGDP07320 174 aa9.43□□□□□ -0.9
SMARCA4-206ENST00000538456 SFTA3P0C7M3 94 aa9.43□□□□□ -0.9
SMARCA4-206ENST00000538456 CAMLGP49069 296 aa9.43□□□□□ -0.9
SMARCA4-206ENST00000538456 ZNF415Q09FC8 603 aa9.43□□□□□ -0.9
SMARCA4-206ENST00000538456 PRR9Q5T870 116 aa9.43□□□□□ -0.9
SMARCA4-206ENST00000538456 Q6ZRG5 221 aa9.43□□□□□ -0.9
SMARCA4-206ENST00000538456 MRPL53Q96EL3 112 aaKnown RBP9.43□□□□□ -0.9
SMARCA4-206ENST00000538456 FAM19A4Q96LR4 140 aa9.43□□□□□ -0.9
SMARCA4-206ENST00000538456 ARPC5LQ9BPX5 153 aa9.43□□□□□ -0.9
SMARCA4-206ENST00000538456 GGACTQ9BVM4 153 aa9.43□□□□□ -0.9
SMARCA4-206ENST00000538456 AGPAT4-IT1Q9H0P7 198 aa9.43□□□□□ -0.9
SMARCA4-206ENST00000538456 MBD2Q9UBB5 411 aa9.43□□□□□ -0.9
SMARCA4-206ENST00000538456 TRBV19A0A075B6N1 114 aa9.42□□□□□ -0.9
SMARCA4-206ENST00000538456 IGKV2-40A0A087WW87 121 aaPredicted RBP9.42□□□□□ -0.9
SMARCA4-206ENST00000538456 H0YIZ8 118 aa9.42□□□□□ -0.9
SMARCA4-206ENST00000538456 K7EP13 123 aa9.42□□□□□ -0.9
SMARCA4-206ENST00000538456 ZNF253O75346 499 aa9.42□□□□□ -0.9
SMARCA4-206ENST00000538456 IGKV2D-40P01614 121 aaPredicted RBP9.42□□□□□ -0.9
SMARCA4-206ENST00000538456 MBPP02686 304 aaPredicted RBP9.42□□□□□ -0.9
SMARCA4-206ENST00000538456 GYPEP15421 78 aa9.42□□□□□ -0.9
SMARCA4-206ENST00000538456 TAS2R30P59541 319 aa9.42□□□□□ -0.9
SMARCA4-206ENST00000538456 LGALSLQ3ZCW2 172 aaPredicted RBP9.42□□□□□ -0.9
SMARCA4-206ENST00000538456 PCNPQ8WW12 178 aaKnown RBP9.42□□□□□ -0.9
SMARCA4-206ENST00000538456 LINC00477Q96M19 166 aa9.42□□□□□ -0.9
SMARCA4-206ENST00000538456 TNFSF18Q9UNG2 199 aa9.42□□□□□ -0.9
SMARCA4-206ENST00000538456 HSPB11Q9Y547 144 aa9.42□□□□□ -0.9
SMARCA4-206ENST00000538456 IGHV1OR15-1A0A075B7D0 117 aa9.41□□□□□ -0.9
SMARCA4-206ENST00000538456 LRCOL1A6NCL2 159 aa9.41□□□□□ -0.9
SMARCA4-206ENST00000538456 ARPC5O15511 151 aa9.41□□□□□ -0.9
SMARCA4-206ENST00000538456 NDUFB4O95168 129 aa9.41□□□□□ -0.9
SMARCA4-206ENST00000538456 S100A10P60903 97 aa9.41□□□□□ -0.9
SMARCA4-206ENST00000538456 RAB31Q13636 194 aa9.41□□□□□ -0.9
SMARCA4-206ENST00000538456 ZNF345Q14585 488 aa9.41□□□□□ -0.9
SMARCA4-206ENST00000538456 EXOC3-AS1Q8N2X6 119 aa9.41□□□□□ -0.9
SMARCA4-206ENST00000538456 ZFAND2AQ8N6M9 145 aa9.41□□□□□ -0.9
SMARCA4-206ENST00000538456 OR1L4Q8NGR5 311 aa9.41□□□□□ -0.9
SMARCA4-206ENST00000538456 NTN5Q8WTR8 489 aaPredicted RBP9.41□□□□□ -0.9
SMARCA4-206ENST00000538456 BLNKQ8WV28 456 aa9.41□□□□□ -0.9
SMARCA4-206ENST00000538456 MRPL32Q9BYC8 188 aaKnown RBP9.41□□□□□ -0.9
SMARCA4-206ENST00000538456 OR5AC2Q9NZP5 309 aa9.41□□□□□ -0.9
SMARCA4-206ENST00000538456 FAM30AQ9NZY2 134 aa9.41□□□□□ -0.9
SMARCA4-206ENST00000538456 TIMM9Q9Y5J7 89 aa9.41□□□□□ -0.9
SMARCA4-206ENST00000538456 HMCN2Q8NDA2 5059 aa9.4□□□□□ -0.9
SMARCA4-206ENST00000538456 L7N2F9 121 aa9.4□□□□□ -0.9
SMARCA4-206ENST00000538456 PYYP10082 97 aa9.4□□□□□ -0.9
SMARCA4-206ENST00000538456 CRISP2P16562 243 aa9.4□□□□□ -0.9
SMARCA4-206ENST00000538456 C10orf126Q8N4M7 172 aa9.4□□□□□ -0.9
SMARCA4-206ENST00000538456 ZNF479Q96JC4 524 aa9.4□□□□□ -0.9
SMARCA4-206ENST00000538456 PFDN5Q99471 154 aa9.4□□□□□ -0.9
SMARCA4-206ENST00000538456 PRELID1Q9Y255 219 aa9.4□□□□□ -0.9
SMARCA4-206ENST00000538456 BOLA1Q9Y3E2 137 aa9.4□□□□□ -0.9
SMARCA4-206ENST00000538456 LSM5Q9Y4Y9 91 aaKnown RBP9.4□□□□□ -0.9
SMARCA4-206ENST00000538456 A0A0D9SG52 128 aa9.39□□□□□ -0.91
SMARCA4-206ENST00000538456 RNF222A6NCQ9 220 aa9.39□□□□□ -0.91
SMARCA4-206ENST00000538456 CST7O76096 145 aa9.39□□□□□ -0.91
SMARCA4-206ENST00000538456 PVALBP20472 110 aaPredicted RBP9.39□□□□□ -0.91
SMARCA4-206ENST00000538456 VAMP2P63027 116 aa9.39□□□□□ -0.91
SMARCA4-206ENST00000538456 MUC21Q5SSG8 566 aa9.39□□□□□ -0.91
SMARCA4-206ENST00000538456 TMEM78Q5T7P6 136 aa9.39□□□□□ -0.91
SMARCA4-206ENST00000538456 FAM122CQ6P4D5 195 aa9.39□□□□□ -0.91
SMARCA4-206ENST00000538456 C9orf47Q6ZRZ4 202 aa9.39□□□□□ -0.91
SMARCA4-206ENST00000538456 KCNRGQ8N5I3 272 aa9.39□□□□□ -0.91
SMARCA4-206ENST00000538456 INO80EQ8NBZ0 244 aaPredicted RBP9.39□□□□□ -0.91
SMARCA4-206ENST00000538456 AQP10Q96PS8 301 aa9.39□□□□□ -0.91
SMARCA4-206ENST00000538456 C11orf1Q9H5F2 150 aa9.39□□□□□ -0.91
SMARCA4-206ENST00000538456 Q9HAA7 133 aa9.39□□□□□ -0.91
SMARCA4-206ENST00000538456 SLC39A9Q9NUM3 307 aa9.39□□□□□ -0.91
SMARCA4-206ENST00000538456 UBE2L5PA0A1B0GUS4 154 aa9.38□□□□□ -0.91
SMARCA4-206ENST00000538456 ORM1P02763 201 aa9.38□□□□□ -0.91
SMARCA4-206ENST00000538456 PLA2G1BP04054 148 aaKnown RBP9.38□□□□□ -0.91
SMARCA4-206ENST00000538456 HIST1H1EP10412 219 aaKnown RBP9.38□□□□□ -0.91
SMARCA4-206ENST00000538456 S100A11P31949 105 aa9.38□□□□□ -0.91
SMARCA4-206ENST00000538456 CAV2P51636 162 aa9.38□□□□□ -0.91
SMARCA4-206ENST00000538456 TMUB2Q71RG4 321 aa9.38□□□□□ -0.91
SMARCA4-206ENST00000538456 Q8N814 137 aa9.38□□□□□ -0.91
SMARCA4-206ENST00000538456 Q8TAT8 98 aa9.38□□□□□ -0.91
SMARCA4-206ENST00000538456 TXNDC17Q9BRA2 123 aa9.38□□□□□ -0.91
SMARCA4-206ENST00000538456 AAMDCQ9H7C9 122 aa9.38□□□□□ -0.91
SMARCA4-206ENST00000538456 UQCC1Q9NVA1 299 aa9.38□□□□□ -0.91
SMARCA4-206ENST00000538456 TMEM14CQ9P0S9 112 aa9.38□□□□□ -0.91
SMARCA4-206ENST00000538456 WDR83OSQ9Y284 106 aa9.38□□□□□ -0.91
SMARCA4-206ENST00000538456 LOC100131303A0A0U1RQF7 123 aa9.37□□□□□ -0.91
SMARCA4-206ENST00000538456 KRTAP29-1A8MX34 341 aaPredicted RBP9.37□□□□□ -0.91
SMARCA4-206ENST00000538456 C9JCJ5 164 aa9.37□□□□□ -0.91
SMARCA4-206ENST00000538456 NMBP08949 121 aa9.37□□□□□ -0.91
SMARCA4-206ENST00000538456 BAXQ07812 192 aa9.37□□□□□ -0.91
SMARCA4-206ENST00000538456 PDE6HQ13956 83 aa9.37□□□□□ -0.91
SMARCA4-206ENST00000538456 LINC00528Q8N1L1 170 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms