RNA–Protein interactions for RNA: ENST00000538367.5

TRA2A-211, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-211ENST00000538367 MSRB1Q9NZV6 116 aa13.82□□□□□ -0.2
TRA2A-211ENST00000538367 MSRB2Q9Y3D2 182 aa13.82□□□□□ -0.2
TRA2A-211ENST00000538367 NDUFA3O95167 84 aa13.82□□□□□ -0.2
TRA2A-211ENST00000538367 GAS8-AS1O95177 125 aa13.81□□□□□ -0.2
TRA2A-211ENST00000538367 CD7P09564 240 aa13.81□□□□□ -0.2
TRA2A-211ENST00000538367 ORMDL2Q53FV1 153 aa13.81□□□□□ -0.2
TRA2A-211ENST00000538367 ORM1P02763 201 aa13.81□□□□□ -0.2
TRA2A-211ENST00000538367 TMEM155Q4W5P6 130 aa13.81□□□□□ -0.2
TRA2A-211ENST00000538367 UFC1Q9Y3C8 167 aa13.81□□□□□ -0.2
TRA2A-211ENST00000538367 DCHS1Q96JQ0 3298 aa13.81□□□□□ -0.2
TRA2A-211ENST00000538367 AKAP13Q12802 2813 aa13.8□□□□□ -0.2
TRA2A-211ENST00000538367 LOC107984156A0A0G2JMH3 177 aa13.8□□□□□ -0.2
TRA2A-211ENST00000538367 TRBV7-9A0A0J9YWB2 115 aa13.8□□□□□ -0.2
TRA2A-211ENST00000538367 NDUFB3O43676 98 aa13.8□□□□□ -0.2
TRA2A-211ENST00000538367 ARL17AQ8IVW1 177 aa13.8□□□□□ -0.2
TRA2A-211ENST00000538367 IGHV4-4A0A075B6R2 117 aa13.79□□□□□ -0.2
TRA2A-211ENST00000538367 RBAKDNA6NC62 111 aa13.79□□□□□ -0.2
TRA2A-211ENST00000538367 NHLRC4P0CG21 123 aaPredicted RBP13.79□□□□□ -0.2
TRA2A-211ENST00000538367 IGHV1-8P0DP01 117 aa13.79□□□□□ -0.2
TRA2A-211ENST00000538367 IGFL2Q6UWQ7 119 aa13.79□□□□□ -0.2
TRA2A-211ENST00000538367 NEXN-AS1Q8NBZ9 246 aa13.79□□□□□ -0.2
TRA2A-211ENST00000538367 LINC01600Q96MT4 127 aa13.79□□□□□ -0.2
TRA2A-211ENST00000538367 FBXL15Q9H469 300 aa13.79□□□□□ -0.2
TRA2A-211ENST00000538367 CELSR3Q9NYQ7 3312 aa13.79□□□□□ -0.2
TRA2A-211ENST00000538367 GAGE12JA6NER3 117 aa13.79□□□□□ -0.2
TRA2A-211ENST00000538367 GAGE7O76087 117 aa13.79□□□□□ -0.2
TRA2A-211ENST00000538367 GAGE12FP0CL80 117 aa13.79□□□□□ -0.2
TRA2A-211ENST00000538367 GAGE12GP0CL81 117 aa13.79□□□□□ -0.2
TRA2A-211ENST00000538367 GAGE12IP0CL82 117 aa13.79□□□□□ -0.2
TRA2A-211ENST00000538367 GAGE4Q13068 117 aa13.79□□□□□ -0.2
TRA2A-211ENST00000538367 TOMM6Q96B49 74 aa13.79□□□□□ -0.2
TRA2A-211ENST00000538367 APELAP0DMC3 54 aa13.78□□□□□ -0.2
TRA2A-211ENST00000538367 COX6B1P14854 86 aa13.78□□□□□ -0.2
TRA2A-211ENST00000538367 NDUFA11Q86Y39 141 aa13.78□□□□□ -0.2
TRA2A-211ENST00000538367 NUP37Q8NFH4 326 aa13.78□□□□□ -0.2
TRA2A-211ENST00000538367 ASPMQ8IZT6 3477 aa13.78□□□□□ -0.2
TRA2A-211ENST00000538367 SPTBN2O15020 2390 aa13.78□□□□□ -0.2
TRA2A-211ENST00000538367 ZNF815PA8K554 130 aa13.78□□□□□ -0.2
TRA2A-211ENST00000538367 B5MCH6 92 aa13.78□□□□□ -0.2
TRA2A-211ENST00000538367 FCN3O75636 299 aa13.78□□□□□ -0.2
TRA2A-211ENST00000538367 GATA1P15976 413 aaPredicted RBP13.78□□□□□ -0.2
TRA2A-211ENST00000538367 NDUFV3P56181 108 aaKnown RBP13.78□□□□□ -0.2
TRA2A-211ENST00000538367 GAGE2BQ13066 116 aa13.78□□□□□ -0.2
TRA2A-211ENST00000538367 GAGE2EQ4V326 116 aa13.78□□□□□ -0.2
TRA2A-211ENST00000538367 ANKRD29Q8N6D5 301 aa13.78□□□□□ -0.2
TRA2A-211ENST00000538367 PRADC1Q9BSG0 188 aa13.78□□□□□ -0.2
TRA2A-211ENST00000538367 SMIM2Q9BVW6 85 aa13.78□□□□□ -0.2
TRA2A-211ENST00000538367 GAGE2DQ9UEU5 116 aa13.78□□□□□ -0.2
TRA2A-211ENST00000538367 TCL1BO95988 128 aa13.77□□□□□ -0.21
TRA2A-211ENST00000538367 CNTFRP26992 372 aa13.77□□□□□ -0.21
TRA2A-211ENST00000538367 IGFBPL1Q8WX77 278 aa13.77□□□□□ -0.21
TRA2A-211ENST00000538367 IGHV3-72A0A0B4J1Y9 119 aa13.76□□□□□ -0.21
TRA2A-211ENST00000538367 CENPVL3A0A0U1RRI6 287 aa13.76□□□□□ -0.21
TRA2A-211ENST00000538367 MBD3L4A6NDZ8 208 aaPredicted RBP13.76□□□□□ -0.21
TRA2A-211ENST00000538367 MBD3L3A6NE82 208 aaPredicted RBP13.76□□□□□ -0.21
TRA2A-211ENST00000538367 MBD3L5A6NJ08 208 aaPredicted RBP13.76□□□□□ -0.21
TRA2A-211ENST00000538367 ZFP2Q6ZN57 461 aa13.76□□□□□ -0.21
TRA2A-211ENST00000538367 MBD3L2Q8NHZ7 208 aaPredicted RBP13.76□□□□□ -0.21
TRA2A-211ENST00000538367 SLC50A1Q9BRV3 221 aa13.76□□□□□ -0.21
TRA2A-211ENST00000538367 IGHV1-3A0A0C4DH29 117 aa13.76□□□□□ -0.21
TRA2A-211ENST00000538367 SCGB2A1O75556 95 aa13.76□□□□□ -0.21
TRA2A-211ENST00000538367 SNCGO76070 127 aa13.76□□□□□ -0.21
TRA2A-211ENST00000538367 LOXP28300 417 aaPredicted RBP13.76□□□□□ -0.21
TRA2A-211ENST00000538367 SRSF9Q13242 221 aaKnown RBP eCLIP13.76□□□□□ -0.21
TRA2A-211ENST00000538367 Q8TAT8 98 aa13.76□□□□□ -0.21
TRA2A-211ENST00000538367 PTH2Q96A98 100 aa13.76□□□□□ -0.21
TRA2A-211ENST00000538367 KAAG1Q9UBP8 84 aa13.76□□□□□ -0.21
TRA2A-211ENST00000538367 SCGB1C2P0DMR2 95 aa13.75□□□□□ -0.21
TRA2A-211ENST00000538367 ERCC8Q13216 396 aa13.75□□□□□ -0.21
TRA2A-211ENST00000538367 PAPPA-AS1Q5QFB9 102 aa13.75□□□□□ -0.21
TRA2A-211ENST00000538367 SCGB1D4Q6XE38 83 aa13.75□□□□□ -0.21
TRA2A-211ENST00000538367 ZFHX4Q86UP3 3567 aa13.75□□□□□ -0.21
TRA2A-211ENST00000538367 MFAP4P55083 255 aa13.75□□□□□ -0.21
TRA2A-211ENST00000538367 C10orf126Q8N4M7 172 aa13.75□□□□□ -0.21
TRA2A-211ENST00000538367 SCGB3A1Q96QR1 104 aa13.75□□□□□ -0.21
TRA2A-211ENST00000538367 TRAV17A0A0B4J275 112 aa13.74□□□□□ -0.21
TRA2A-211ENST00000538367 TMEM178BH3BS89 294 aa13.74□□□□□ -0.21
TRA2A-211ENST00000538367 IGLV1-47P01700 117 aa13.74□□□□□ -0.21
TRA2A-211ENST00000538367 EFNA4P52798 201 aa13.74□□□□□ -0.21
TRA2A-211ENST00000538367 IFITM1P13164 125 aa13.73□□□□□ -0.21
TRA2A-211ENST00000538367 PRR30Q53SZ7 412 aaPredicted RBP13.73□□□□□ -0.21
TRA2A-211ENST00000538367 HLA-DMBP28068 263 aa13.73□□□□□ -0.21
TRA2A-211ENST00000538367 HERVK_113P61574 105 aa13.73□□□□□ -0.21
TRA2A-211ENST00000538367 GFRALQ6UXV0 394 aa13.73□□□□□ -0.21
TRA2A-211ENST00000538367 AJUBAQ96IF1 538 aa13.73□□□□□ -0.21
TRA2A-211ENST00000538367 C17orf100A8MU93 164 aa13.72□□□□□ -0.21
TRA2A-211ENST00000538367 PLXNB1O43157 2135 aa13.72□□□□□ -0.21
TRA2A-211ENST00000538367 FAM90A27PA6NNH2 459 aa13.72□□□□□ -0.21
TRA2A-211ENST00000538367 TRGV3P03979 118 aa13.72□□□□□ -0.21
TRA2A-211ENST00000538367 RPL32P62910 135 aaKnown RBP13.72□□□□□ -0.21
TRA2A-211ENST00000538367 MRPL23Q16540 153 aaKnown RBP13.72□□□□□ -0.21
TRA2A-211ENST00000538367 IGFL3Q6UXB1 125 aa13.72□□□□□ -0.21
TRA2A-211ENST00000538367 SLC25A20O43772 301 aa13.71□□□□□ -0.21
TRA2A-211ENST00000538367 TTC32Q5I0X7 151 aa13.71□□□□□ -0.21
TRA2A-211ENST00000538367 APC2O95996 2303 aa13.7□□□□□ -0.22
TRA2A-211ENST00000538367 A0A0J9YY99 117 aa13.7□□□□□ -0.22
TRA2A-211ENST00000538367 BUB1B-PAK6H3BSN5 160 aa13.7□□□□□ -0.22
TRA2A-211ENST00000538367 BAALCQ8WXS3 180 aa13.7□□□□□ -0.22
TRA2A-211ENST00000538367 LOC400499M0QZD8 3231 aa13.7□□□□□ -0.22
TRA2A-211ENST00000538367 ARFGEF3Q5TH69 2177 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms