RNA–Protein interactions for RNA: ENST00000537983.1

NPIPB3-208, Transcript of nuclear pore complex interacting protein family member B3, human

TSL 4

Gene NPIPB3, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB3-208	ENST00000537983	SGK494	Q96LW2	274 aa		4.16	□□□□□ -1.74
NPIPB3-208	ENST00000537983	HIST1H2BN	Q99877	126 aa		4.16	□□□□□ -1.74
NPIPB3-208	ENST00000537983	HIST1H2BM	Q99879	126 aa		4.16	□□□□□ -1.74
NPIPB3-208	ENST00000537983	SAV1	Q9H4B6	383 aa	Predicted RBP	4.16	□□□□□ -1.74
NPIPB3-208	ENST00000537983	NAT8B	Q9UHF3	227 aa		4.16	□□□□□ -1.74
NPIPB3-208	ENST00000537983	CRYBG3	Q68DQ2	2970 aa		4.16	□□□□□ -1.74
NPIPB3-208	ENST00000537983	CHD6	Q8TD26	2715 aa		4.15	□□□□□ -1.74
NPIPB3-208	ENST00000537983	ZNF469	Q96JG9	3925 aa	Predicted RBP	4.15	□□□□□ -1.74
NPIPB3-208	ENST00000537983	CSPG4	Q6UVK1	2322 aa		4.15	□□□□□ -1.74
NPIPB3-208	ENST00000537983	IGHV3OR16-13	A0A075B7E8	117 aa		4.15	□□□□□ -1.75
NPIPB3-208	ENST00000537983	IGHV3-49	A0A0A0MS15	119 aa		4.15	□□□□□ -1.75
NPIPB3-208	ENST00000537983	IGHV3-74	A0A0B4J1X5	117 aa		4.15	□□□□□ -1.75
NPIPB3-208	ENST00000537983	TRAV8-2	A0A0B4J237	113 aa		4.15	□□□□□ -1.75
NPIPB3-208	ENST00000537983	IGHV3-66	A0A0C4DH42	116 aa		4.15	□□□□□ -1.75
NPIPB3-208	ENST00000537983	XKRY2	A2RUG3	117 aa		4.15	□□□□□ -1.75
NPIPB3-208	ENST00000537983	SOCS3	O14543	225 aa		4.15	□□□□□ -1.75
NPIPB3-208	ENST00000537983	HLA-DQA1	P01909	254 aa		4.15	□□□□□ -1.75
NPIPB3-208	ENST00000537983	TRGC1	P0CF51	173 aa		4.15	□□□□□ -1.75
NPIPB3-208	ENST00000537983	SRD5A1	P18405	259 aa		4.15	□□□□□ -1.75
NPIPB3-208	ENST00000537983	FAM162B	Q5T6X4	162 aa		4.15	□□□□□ -1.75
NPIPB3-208	ENST00000537983		Q6AWC8	147 aa		4.15	□□□□□ -1.75
NPIPB3-208	ENST00000537983	LCN12	Q6JVE5	192 aa		4.15	□□□□□ -1.75
NPIPB3-208	ENST00000537983		Q6ZSV7	163 aa		4.15	□□□□□ -1.75
NPIPB3-208	ENST00000537983	KLHDC1	Q8N7A1	406 aa		4.15	□□□□□ -1.75
NPIPB3-208	ENST00000537983	ZNF418	Q8TF45	676 aa	Predicted RBP	4.15	□□□□□ -1.75
NPIPB3-208	ENST00000537983	FRZB	Q92765	325 aa		4.15	□□□□□ -1.75
NPIPB3-208	ENST00000537983	DUX5	Q96PT3	197 aa		4.15	□□□□□ -1.75
NPIPB3-208	ENST00000537983	RHPN1-AS1	Q9BWJ2	59 aa		4.15	□□□□□ -1.75
NPIPB3-208	ENST00000537983	GNB1L	Q9BYB4	327 aa		4.15	□□□□□ -1.75
NPIPB3-208	ENST00000537983	C16orf95	Q9H693	158 aa		4.15	□□□□□ -1.75
NPIPB3-208	ENST00000537983	NRN1	Q9NPD7	142 aa		4.15	□□□□□ -1.75
NPIPB3-208	ENST00000537983	SMPX	Q9UHP9	88 aa		4.15	□□□□□ -1.75
NPIPB3-208	ENST00000537983	LENEP	Q9Y5L5	61 aa		4.15	□□□□□ -1.75
NPIPB3-208	ENST00000537983	TRAPPC1	Q9Y5R8	145 aa		4.15	□□□□□ -1.75
NPIPB3-208	ENST00000537983	TACC2	O95359	2948 aa		4.15	□□□□□ -1.75
NPIPB3-208	ENST00000537983	POLQ	O75417	2590 aa		4.15	□□□□□ -1.75
NPIPB3-208	ENST00000537983	ASH1L	Q9NR48	2969 aa	Known RBP	4.15	□□□□□ -1.75
NPIPB3-208	ENST00000537983	CSMD1	Q96PZ7	3565 aa		4.15	□□□□□ -1.75
NPIPB3-208	ENST00000537983	ABCA12	Q86UK0	2595 aa		4.14	□□□□□ -1.75
NPIPB3-208	ENST00000537983	UTP20	O75691	2785 aa	Known RBP	4.14	□□□□□ -1.75
NPIPB3-208	ENST00000537983	APC	P25054	2843 aa		4.14	□□□□□ -1.75
NPIPB3-208	ENST00000537983	IGHV4OR15-8	A0A075B7B6	117 aa		4.14	□□□□□ -1.75
NPIPB3-208	ENST00000537983		A0A087WW49	117 aa		4.14	□□□□□ -1.75
NPIPB3-208	ENST00000537983		A0A1B0GXF2	115 aa		4.14	□□□□□ -1.75
NPIPB3-208	ENST00000537983	TMEM213	A2RRL7	107 aa		4.14	□□□□□ -1.75
NPIPB3-208	ENST00000537983	HIGD1C	A8MV81	97 aa		4.14	□□□□□ -1.75
NPIPB3-208	ENST00000537983	SNURFL	B1AK76	121 aa		4.14	□□□□□ -1.75
NPIPB3-208	ENST00000537983	LINC01619	G3V211	115 aa		4.14	□□□□□ -1.75
NPIPB3-208	ENST00000537983		M0QZ24	198 aa		4.14	□□□□□ -1.75
NPIPB3-208	ENST00000537983	OVOL1	O14753	267 aa		4.14	□□□□□ -1.75
NPIPB3-208	ENST00000537983	NDUFA7	O95182	113 aa		4.14	□□□□□ -1.75
NPIPB3-208	ENST00000537983	CA1	P00915	261 aa	Predicted RBP	4.14	□□□□□ -1.75
NPIPB3-208	ENST00000537983	S100A8	P05109	93 aa		4.14	□□□□□ -1.75
NPIPB3-208	ENST00000537983	HLA-DMB	P28068	263 aa		4.14	□□□□□ -1.75
NPIPB3-208	ENST00000537983	HOXD3	P31249	432 aa	Predicted RBP	4.14	□□□□□ -1.75
NPIPB3-208	ENST00000537983	CDX1	P47902	265 aa	Predicted RBP	4.14	□□□□□ -1.75
NPIPB3-208	ENST00000537983	TCL1A	P56279	114 aa		4.14	□□□□□ -1.75
NPIPB3-208	ENST00000537983	HILS1	P60008	231 aa		4.14	□□□□□ -1.75
NPIPB3-208	ENST00000537983	RPS20	P60866	119 aa	Known RBP	4.14	□□□□□ -1.75
NPIPB3-208	ENST00000537983	SNRPE	P62304	92 aa	Known RBP	4.14	□□□□□ -1.75
NPIPB3-208	ENST00000537983	FABP9	Q0Z7S8	132 aa		4.14	□□□□□ -1.75
NPIPB3-208	ENST00000537983	SMUG1	Q53HV7	270 aa		4.14	□□□□□ -1.75
NPIPB3-208	ENST00000537983	COA6	Q5JTJ3	125 aa	Known RBP	4.14	□□□□□ -1.75
NPIPB3-208	ENST00000537983	TMEM78	Q5T7P6	136 aa		4.14	□□□□□ -1.75
NPIPB3-208	ENST00000537983	LINC00322	Q6ZN03	302 aa	Predicted RBP	4.14	□□□□□ -1.75
NPIPB3-208	ENST00000537983	RBPMS2	Q6ZRY4	209 aa	Known RBP	4.14	□□□□□ -1.75
NPIPB3-208	ENST00000537983	C9orf47	Q6ZRZ4	202 aa		4.14	□□□□□ -1.75
NPIPB3-208	ENST00000537983	RNF182	Q8N6D2	247 aa		4.14	□□□□□ -1.75
NPIPB3-208	ENST00000537983	ZNF738	Q8NE65	137 aa		4.14	□□□□□ -1.75
NPIPB3-208	ENST00000537983	NUP35	Q8NFH5	326 aa		4.14	□□□□□ -1.75
NPIPB3-208	ENST00000537983	OR2D3	Q8NGH3	330 aa		4.14	□□□□□ -1.75
NPIPB3-208	ENST00000537983	RNF183	Q96D59	192 aa		4.14	□□□□□ -1.75
NPIPB3-208	ENST00000537983	URB1-AS1	Q96HZ7	61 aa		4.14	□□□□□ -1.75
NPIPB3-208	ENST00000537983	VGLL1	Q99990	258 aa		4.14	□□□□□ -1.75
NPIPB3-208	ENST00000537983	ESM1	Q9NQ30	184 aa		4.14	□□□□□ -1.75
NPIPB3-208	ENST00000537983	TENM4	Q6N022	2769 aa		4.14	□□□□□ -1.75
NPIPB3-208	ENST00000537983	CELSR2	Q9HCU4	2923 aa		4.13	□□□□□ -1.75
NPIPB3-208	ENST00000537983	TRBV7-9	A0A0J9YWB2	115 aa		4.13	□□□□□ -1.75
NPIPB3-208	ENST00000537983		A0A1B0GW15	77 aa		4.13	□□□□□ -1.75
NPIPB3-208	ENST00000537983	C2orf70	A6NJV1	201 aa		4.13	□□□□□ -1.75
NPIPB3-208	ENST00000537983	ZNF705F	A8MVS1	300 aa	Predicted RBP	4.13	□□□□□ -1.75
NPIPB3-208	ENST00000537983	PRAC2	D3DTV9	90 aa		4.13	□□□□□ -1.75
NPIPB3-208	ENST00000537983	SH2D1A	O60880	128 aa		4.13	□□□□□ -1.75
NPIPB3-208	ENST00000537983	CBLN1	P23435	193 aa		4.13	□□□□□ -1.75
NPIPB3-208	ENST00000537983	ID1	P41134	155 aa		4.13	□□□□□ -1.75
NPIPB3-208	ENST00000537983	ZNF138	P52744	262 aa		4.13	□□□□□ -1.75
NPIPB3-208	ENST00000537983	FOXA3	P55318	350 aa	Predicted RBP	4.13	□□□□□ -1.75
NPIPB3-208	ENST00000537983	NDUFA6	P56556	154 aa		4.13	□□□□□ -1.75
NPIPB3-208	ENST00000537983	HBB	P68871	147 aa		4.13	□□□□□ -1.75
NPIPB3-208	ENST00000537983	KLF5	Q13887	457 aa	Predicted RBP	4.13	□□□□□ -1.75
NPIPB3-208	ENST00000537983	MRPL54	Q6P161	138 aa	Known RBP	4.13	□□□□□ -1.75
NPIPB3-208	ENST00000537983	TMEM136	Q6ZRR5	245 aa		4.13	□□□□□ -1.75
NPIPB3-208	ENST00000537983	TCF24	Q7RTU0	167 aa		4.13	□□□□□ -1.75
NPIPB3-208	ENST00000537983	OR10J6P	Q8NGY7	276 aa		4.13	□□□□□ -1.75
NPIPB3-208	ENST00000537983		Q8TAT8	98 aa		4.13	□□□□□ -1.75
NPIPB3-208	ENST00000537983	TMEM18	Q96B42	140 aa		4.13	□□□□□ -1.75
NPIPB3-208	ENST00000537983	LINC00477	Q96M19	166 aa		4.13	□□□□□ -1.75
NPIPB3-208	ENST00000537983	ASCL2	Q99929	193 aa		4.13	□□□□□ -1.75
NPIPB3-208	ENST00000537983	GPR61	Q9BZJ8	451 aa		4.13	□□□□□ -1.75
NPIPB3-208	ENST00000537983	TRAV2	A0A0B4J234	112 aa		4.12	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms