RNA–Protein interactions for RNA: ENST00000536337.5

PTPN21-202, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 3,943 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-202ENST00000536337 TMEM170BQ5T4T1 132 aa10.13□□□□□ -0.79
PTPN21-202ENST00000536337 OR1N2Q8NGR9 330 aa10.13□□□□□ -0.79
PTPN21-202ENST00000536337 MLST8Q9BVC4 326 aa10.13□□□□□ -0.79
PTPN21-202ENST00000536337 ATMQ13315 3056 aa10.13□□□□□ -0.79
PTPN21-202ENST00000536337 DMDP11532 3685 aa10.13□□□□□ -0.79
PTPN21-202ENST00000536337 C19orf71A6NCJ1 209 aa10.13□□□□□ -0.79
PTPN21-202ENST00000536337 MRPL52Q86TS9 123 aaKnown RBP10.13□□□□□ -0.79
PTPN21-202ENST00000536337 RNASE8Q8TDE3 154 aaKnown RBP10.13□□□□□ -0.79
PTPN21-202ENST00000536337 ATP5LO75964 103 aa10.13□□□□□ -0.79
PTPN21-202ENST00000536337 DPM2O94777 84 aa10.13□□□□□ -0.79
PTPN21-202ENST00000536337 APOMO95445 188 aa10.13□□□□□ -0.79
PTPN21-202ENST00000536337 PPBPP02775 128 aa10.13□□□□□ -0.79
PTPN21-202ENST00000536337 C8orf31Q8N9H6 132 aa10.13□□□□□ -0.79
PTPN21-202ENST00000536337 ZNF56Q15929 161 aa10.12□□□□□ -0.79
PTPN21-202ENST00000536337 H3BUX3 64 aa10.12□□□□□ -0.79
PTPN21-202ENST00000536337 CTSGP08311 255 aa10.12□□□□□ -0.79
PTPN21-202ENST00000536337 MTURNQ8N3F0 131 aa10.12□□□□□ -0.79
PTPN21-202ENST00000536337 A0A1B0GXF2 115 aa10.12□□□□□ -0.79
PTPN21-202ENST00000536337 GAGE1Q13065 139 aa10.12□□□□□ -0.79
PTPN21-202ENST00000536337 TTC9CQ8N5M4 171 aa10.12□□□□□ -0.79
PTPN21-202ENST00000536337 TACC2O95359 2948 aa10.11□□□□□ -0.79
PTPN21-202ENST00000536337 NPFFO15130 113 aa10.11□□□□□ -0.79
PTPN21-202ENST00000536337 FCN3O75636 299 aa10.11□□□□□ -0.79
PTPN21-202ENST00000536337 CD7P09564 240 aa10.11□□□□□ -0.79
PTPN21-202ENST00000536337 PSMB2P49721 201 aa10.11□□□□□ -0.79
PTPN21-202ENST00000536337 EFNA4P52798 201 aa10.11□□□□□ -0.79
PTPN21-202ENST00000536337 CD300EQ496F6 205 aaPredicted RBP10.11□□□□□ -0.79
PTPN21-202ENST00000536337 PRSS22Q9GZN4 317 aa10.11□□□□□ -0.79
PTPN21-202ENST00000536337 CD5LO43866 347 aa10.11□□□□□ -0.79
PTPN21-202ENST00000536337 ZNF292O60281 2723 aa10.11□□□□□ -0.79
PTPN21-202ENST00000536337 ABCA12Q86UK0 2595 aa10.11□□□□□ -0.79
PTPN21-202ENST00000536337 INS-IGF2F8WCM5 200 aa10.11□□□□□ -0.79
PTPN21-202ENST00000536337 PRSS2P07478 247 aa10.11□□□□□ -0.79
PTPN21-202ENST00000536337 SRSF1Q07955 248 aaKnown RBP eCLIP10.11□□□□□ -0.79
PTPN21-202ENST00000536337 MINOS1Q5TGZ0 78 aa10.11□□□□□ -0.79
PTPN21-202ENST00000536337 FANCD2OSQ96PS1 177 aa10.11□□□□□ -0.79
PTPN21-202ENST00000536337 MINOS1-NBL1R4GNA1 71 aa10.11□□□□□ -0.79
PTPN21-202ENST00000536337 IGHV3OR16-12A0A075B7B8 117 aa10.1□□□□□ -0.79
PTPN21-202ENST00000536337 F6UB75 175 aa10.1□□□□□ -0.79
PTPN21-202ENST00000536337 COX8AP10176 69 aa10.1□□□□□ -0.79
PTPN21-202ENST00000536337 ZFP36P26651 326 aaKnown RBP10.1□□□□□ -0.79
PTPN21-202ENST00000536337 SEC11AP67812 179 aa10.1□□□□□ -0.79
PTPN21-202ENST00000536337 DTX2Q86UW9 622 aa10.1□□□□□ -0.79
PTPN21-202ENST00000536337 DUX5Q96PT3 197 aa10.1□□□□□ -0.79
PTPN21-202ENST00000536337 CCL19Q99731 98 aa10.1□□□□□ -0.79
PTPN21-202ENST00000536337 AKAP13Q12802 2813 aa10.1□□□□□ -0.79
PTPN21-202ENST00000536337 TMEM8BA6NDV4 472 aa10.1□□□□□ -0.79
PTPN21-202ENST00000536337 SMAD7O15105 426 aaKnown RBP10.1□□□□□ -0.79
PTPN21-202ENST00000536337 ID1P41134 155 aa10.1□□□□□ -0.79
PTPN21-202ENST00000536337 HSD52Q0P140 79 aa10.1□□□□□ -0.79
PTPN21-202ENST00000536337 NEGR1Q7Z3B1 354 aa10.1□□□□□ -0.79
PTPN21-202ENST00000536337 SPATA12Q7Z6I5 190 aa10.1□□□□□ -0.79
PTPN21-202ENST00000536337 PIMREGQ9BSJ6 248 aa10.1□□□□□ -0.79
PTPN21-202ENST00000536337 AGPAT4-IT1Q9H0P7 198 aa10.1□□□□□ -0.79
PTPN21-202ENST00000536337 IGHV7-81A0A0B4J1V7 117 aa10.1□□□□□ -0.79
PTPN21-202ENST00000536337 GNLYP22749 145 aa10.1□□□□□ -0.79
PTPN21-202ENST00000536337 CTRLP40313 264 aa10.1□□□□□ -0.79
PTPN21-202ENST00000536337 FOXE3Q13461 319 aa10.1□□□□□ -0.79
PTPN21-202ENST00000536337 SAMD5Q5TGI4 173 aa10.1□□□□□ -0.79
PTPN21-202ENST00000536337 MAPK1IP1LQ8NDC0 245 aa10.1□□□□□ -0.79
PTPN21-202ENST00000536337 DPF1Q92782 380 aa10.1□□□□□ -0.79
PTPN21-202ENST00000536337 SRSF8Q9BRL6 282 aaKnown RBP10.1□□□□□ -0.79
PTPN21-202ENST00000536337 CST9LQ9H4G1 147 aa10.1□□□□□ -0.79
PTPN21-202ENST00000536337 CYSLTR1Q9Y271 337 aa10.1□□□□□ -0.79
PTPN21-202ENST00000536337 LAGE3Q14657 143 aa10.09□□□□□ -0.79
PTPN21-202ENST00000536337 IGLV11-55A0A075B6I3 123 aa10.09□□□□□ -0.79
PTPN21-202ENST00000536337 LINC01548A6NM66 108 aa10.09□□□□□ -0.79
PTPN21-202ENST00000536337 ZNF688P0C7X2 276 aa10.09□□□□□ -0.79
PTPN21-202ENST00000536337 ZNF80P51504 273 aaPredicted RBP10.09□□□□□ -0.79
PTPN21-202ENST00000536337 C8orf86Q6ZUL3 223 aa10.09□□□□□ -0.79
PTPN21-202ENST00000536337 OR4X2Q8NGF9 303 aa10.09□□□□□ -0.79
PTPN21-202ENST00000536337 CRIP1P50238 77 aa10.09□□□□□ -0.79
PTPN21-202ENST00000536337 HERVK_113P61574 105 aa10.09□□□□□ -0.79
PTPN21-202ENST00000536337 KIR2DL4Q99706 377 aa10.09□□□□□ -0.79
PTPN21-202ENST00000536337 NPFFR1Q9GZQ6 430 aa10.09□□□□□ -0.79
PTPN21-202ENST00000536337 IGHV3-64A0A075B6Q5 118 aa10.08□□□□□ -0.8
PTPN21-202ENST00000536337 A0A087WWL8 130 aa10.08□□□□□ -0.8
PTPN21-202ENST00000536337 CFHR4Q92496 578 aa10.08□□□□□ -0.8
PTPN21-202ENST00000536337 HIVEP2P31629 2446 aa10.08□□□□□ -0.8
PTPN21-202ENST00000536337 OVOL3O00110 214 aa10.08□□□□□ -0.8
PTPN21-202ENST00000536337 ZNF418Q8TF45 676 aaPredicted RBP10.08□□□□□ -0.8
PTPN21-202ENST00000536337 TRAV12-3A0A0B4J271 114 aa10.08□□□□□ -0.8
PTPN21-202ENST00000536337 K7ERJ3 54 aa10.08□□□□□ -0.8
PTPN21-202ENST00000536337 MYCNOSP40205 109 aa10.08□□□□□ -0.8
PTPN21-202ENST00000536337 Q8N976 141 aa10.08□□□□□ -0.8
PTPN21-202ENST00000536337 OR11H6Q8NGC7 330 aa10.08□□□□□ -0.8
PTPN21-202ENST00000536337 MRPL16Q9NX20 251 aaKnown RBP10.08□□□□□ -0.8
PTPN21-202ENST00000536337 TRAV21A0A0B4J279 112 aa10.07□□□□□ -0.8
PTPN21-202ENST00000536337 DGAT2L7PQ6IED9 249 aa10.07□□□□□ -0.8
PTPN21-202ENST00000536337 MRPL35Q9NZE8 188 aaKnown RBP10.07□□□□□ -0.8
PTPN21-202ENST00000536337 MTORP42345 2549 aa10.07□□□□□ -0.8
PTPN21-202ENST00000536337 OR9G4Q8NGQ1 327 aa10.07□□□□□ -0.8
PTPN21-202ENST00000536337 BEX4Q9NWD9 120 aaPredicted RBP10.07□□□□□ -0.8
PTPN21-202ENST00000536337 OOSP1A8MZH6 123 aa10.06□□□□□ -0.8
PTPN21-202ENST00000536337 UBE2E1P51965 193 aa10.06□□□□□ -0.8
PTPN21-202ENST00000536337 OCIAD2Q56VL3 154 aa10.06□□□□□ -0.8
PTPN21-202ENST00000536337 CDSNQ15517 529 aa10.06□□□□□ -0.8
PTPN21-202ENST00000536337 FAM110DQ8TAY7 271 aaPredicted RBP10.06□□□□□ -0.8
PTPN21-202ENST00000536337 RHPN1-AS1Q9BWJ2 59 aa10.06□□□□□ -0.8
PTPN21-202ENST00000536337 MOB4Q9Y3A3 225 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms