RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 CCL16O15467 120 aa1.23□□□□□ -2.21
VBP1-203ENST00000535916 GNG7O60262 68 aa1.23□□□□□ -2.21
VBP1-203ENST00000535916 MRPS14O60783 128 aaKnown RBP1.23□□□□□ -2.21
VBP1-203ENST00000535916 IGF2P01344 180 aa1.23□□□□□ -2.21
VBP1-203ENST00000535916 CLLU1Q5K131 121 aa1.23□□□□□ -2.21
VBP1-203ENST00000535916 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.23□□□□□ -2.21
VBP1-203ENST00000535916 IZUMO2Q6UXV1 221 aa1.23□□□□□ -2.21
VBP1-203ENST00000535916 CASC2Q6XLA1 102 aa1.23□□□□□ -2.21
VBP1-203ENST00000535916 C4orf3Q8WVX3 66 aa1.23□□□□□ -2.21
VBP1-203ENST00000535916 ZNF625Q96I27 306 aaPredicted RBP1.23□□□□□ -2.21
VBP1-203ENST00000535916 CIB3Q96Q77 187 aaPredicted RBP1.23□□□□□ -2.21
VBP1-203ENST00000535916 NAA38Q9BRA0 125 aaKnown RBP1.23□□□□□ -2.21
VBP1-203ENST00000535916 REG4Q9BYZ8 158 aa1.23□□□□□ -2.21
VBP1-203ENST00000535916 MICAL3Q7RTP6 2002 aa1.23□□□□□ -2.21
VBP1-203ENST00000535916 AHNAK2Q8IVF2 5795 aa1.23□□□□□ -2.21
VBP1-203ENST00000535916 SMG6Q86US8 1419 aaKnown RBP1.23□□□□□ -2.21
VBP1-203ENST00000535916 IBTKQ9P2D0 1353 aaPredicted RBP1.22□□□□□ -2.21
VBP1-203ENST00000535916 FAM135AQ9P2D6 1515 aa1.22□□□□□ -2.21
VBP1-203ENST00000535916 PRRC2BQ5JSZ5 2229 aaKnown RBP1.22□□□□□ -2.21
VBP1-203ENST00000535916 TRBV6-4A0A1B0GX49 114 aa1.22□□□□□ -2.21
VBP1-203ENST00000535916 IFITM5A6NNB3 132 aa1.22□□□□□ -2.21
VBP1-203ENST00000535916 M0R2P5 195 aa1.22□□□□□ -2.21
VBP1-203ENST00000535916 HCRTO43612 131 aa1.22□□□□□ -2.21
VBP1-203ENST00000535916 EDF1O60869 148 aaKnown RBP1.22□□□□□ -2.21
VBP1-203ENST00000535916 PITX3O75364 302 aa1.22□□□□□ -2.21
VBP1-203ENST00000535916 RBP4P02753 201 aa1.22□□□□□ -2.21
VBP1-203ENST00000535916 COX7CP15954 63 aa1.22□□□□□ -2.21
VBP1-203ENST00000535916 CKS2P33552 79 aa1.22□□□□□ -2.21
VBP1-203ENST00000535916 NEDD8Q15843 81 aa1.22□□□□□ -2.21
VBP1-203ENST00000535916 CCSMST1Q4G0I0 132 aa1.22□□□□□ -2.21
VBP1-203ENST00000535916 TEX261Q6UWH6 196 aa1.22□□□□□ -2.21
VBP1-203ENST00000535916 C10orf111Q8N326 155 aa1.22□□□□□ -2.21
VBP1-203ENST00000535916 C15orf53Q8NAA6 179 aa1.22□□□□□ -2.21
VBP1-203ENST00000535916 OR10AG1Q8NH19 301 aa1.22□□□□□ -2.21
VBP1-203ENST00000535916 TMEM191AQ9H0A3 160 aa1.22□□□□□ -2.21
VBP1-203ENST00000535916 ORMDL1Q9P0S3 153 aa1.22□□□□□ -2.21
VBP1-203ENST00000535916 ZNF518AQ6AHZ1 1483 aa1.22□□□□□ -2.21
VBP1-203ENST00000535916 KIDINS220Q9ULH0 1771 aa1.21□□□□□ -2.22
VBP1-203ENST00000535916 TRGV2A0A075B6R0 118 aa1.21□□□□□ -2.22
VBP1-203ENST00000535916 IGHV1-24A0A0C4DH33 117 aa1.21□□□□□ -2.22
VBP1-203ENST00000535916 M0R129 80 aa1.21□□□□□ -2.22
VBP1-203ENST00000535916 YPEL1O60688 119 aa1.21□□□□□ -2.22
VBP1-203ENST00000535916 GKN2Q86XP6 184 aa1.21□□□□□ -2.22
VBP1-203ENST00000535916 CDK5RAP2Q96SN8 1893 aa1.2□□□□□ -2.22
VBP1-203ENST00000535916 LRP5O75197 1615 aa1.2□□□□□ -2.22
VBP1-203ENST00000535916 LOC107984156A0A0G2JMH3 177 aa1.2□□□□□ -2.22
VBP1-203ENST00000535916 M0R2N4 97 aa1.2□□□□□ -2.22
VBP1-203ENST00000535916 IGHV3-33P01772 117 aa1.2□□□□□ -2.22
VBP1-203ENST00000535916 PRB1P04280 392 aa1.2□□□□□ -2.22
VBP1-203ENST00000535916 APODP05090 189 aa1.2□□□□□ -2.22
VBP1-203ENST00000535916 ADCYAP1P18509 176 aa1.2□□□□□ -2.22
VBP1-203ENST00000535916 NUMA1Q14980 2115 aa1.2□□□□□ -2.22
VBP1-203ENST00000535916 Q6ZUT4 128 aa1.2□□□□□ -2.22
VBP1-203ENST00000535916 ARL17AQ8IVW1 177 aa1.2□□□□□ -2.22
VBP1-203ENST00000535916 ATOH7Q8N100 152 aa1.2□□□□□ -2.22
VBP1-203ENST00000535916 ATP6V0E2Q8NHE4 81 aa1.2□□□□□ -2.22
VBP1-203ENST00000535916 ZNF431Q8TF32 576 aaPredicted RBP1.2□□□□□ -2.22
VBP1-203ENST00000535916 SMIM7Q9BQ49 75 aa1.2□□□□□ -2.22
VBP1-203ENST00000535916 KLK9Q9UKQ9 250 aa1.2□□□□□ -2.22
VBP1-203ENST00000535916 COL4A1P02462 1669 aa1.2□□□□□ -2.22
VBP1-203ENST00000535916 QRICH2Q9H0J4 1663 aa1.2□□□□□ -2.22
VBP1-203ENST00000535916 CUL9Q8IWT3 2517 aa1.19□□□□□ -2.22
VBP1-203ENST00000535916 LOC110117498A0A087WWA1 95 aa1.19□□□□□ -2.22
VBP1-203ENST00000535916 FAM92AA1XBS5 289 aa1.19□□□□□ -2.22
VBP1-203ENST00000535916 MIF4GDA9UHW6 222 aaKnown RBP1.19□□□□□ -2.22
VBP1-203ENST00000535916 F8W1H4 67 aa1.19□□□□□ -2.22
VBP1-203ENST00000535916 CDC42EP2O14613 210 aa1.19□□□□□ -2.22
VBP1-203ENST00000535916 INE1O15225 51 aa1.19□□□□□ -2.22
VBP1-203ENST00000535916 NUPR1O60356 82 aa1.19□□□□□ -2.22
VBP1-203ENST00000535916 APOC1P02654 83 aa1.19□□□□□ -2.22
VBP1-203ENST00000535916 FAM74A1Q5RGS3 127 aa1.19□□□□□ -2.22
VBP1-203ENST00000535916 ATP11AUNQ6ZP68 121 aa1.19□□□□□ -2.22
VBP1-203ENST00000535916 ZNF563Q8TA94 476 aa1.19□□□□□ -2.22
VBP1-203ENST00000535916 GBF1Q92538 1859 aa1.19□□□□□ -2.22
VBP1-203ENST00000535916 CDC42SE1Q9NRR8 79 aa1.19□□□□□ -2.22
VBP1-203ENST00000535916 MED9Q9NWA0 146 aa1.19□□□□□ -2.22
VBP1-203ENST00000535916 CCDC167Q9P0B6 97 aa1.19□□□□□ -2.22
VBP1-203ENST00000535916 PTPRMP28827 1452 aa1.18□□□□□ -2.22
VBP1-203ENST00000535916 ZFHX2Q9C0A1 2572 aaPredicted RBP1.18□□□□□ -2.22
VBP1-203ENST00000535916 BCORL1Q5H9F3 1711 aa1.18□□□□□ -2.22
VBP1-203ENST00000535916 A0A0G2JMM0 328 aa1.18□□□□□ -2.22
VBP1-203ENST00000535916 LOC100130705A0A1B0GUX0 176 aa1.18□□□□□ -2.22
VBP1-203ENST00000535916 A0A1W2PPB8 328 aa1.18□□□□□ -2.22
VBP1-203ENST00000535916 KIR3DP1A8MWS1 328 aa1.18□□□□□ -2.22
VBP1-203ENST00000535916 PYYP10082 97 aa1.18□□□□□ -2.22
VBP1-203ENST00000535916 GUCA1AP43080 201 aaPredicted RBP1.18□□□□□ -2.22
VBP1-203ENST00000535916 MPV17LQ2QL34 196 aa1.18□□□□□ -2.22
VBP1-203ENST00000535916 SPRNQ5BIV9 151 aa1.18□□□□□ -2.22
VBP1-203ENST00000535916 MIC13Q5XKP0 118 aa1.18□□□□□ -2.22
VBP1-203ENST00000535916 SCIMPQ6UWF3 145 aa1.18□□□□□ -2.22
VBP1-203ENST00000535916 UNQ6190/PRO20217Q6UXQ8 127 aa1.18□□□□□ -2.22
VBP1-203ENST00000535916 SNX29P2Q8IUI4 249 aa1.18□□□□□ -2.22
VBP1-203ENST00000535916 TCTEX1D1Q8N7M0 179 aa1.18□□□□□ -2.22
VBP1-203ENST00000535916 C5orf17Q8NAS9 161 aa1.18□□□□□ -2.22
VBP1-203ENST00000535916 TMEM203Q969S6 136 aa1.18□□□□□ -2.22
VBP1-203ENST00000535916 DPH3Q96FX2 82 aa1.18□□□□□ -2.22
VBP1-203ENST00000535916 CYSTM1Q9H1C7 97 aa1.18□□□□□ -2.22
VBP1-203ENST00000535916 SAR1AQ9NR31 198 aa1.18□□□□□ -2.22
VBP1-203ENST00000535916 ZFP30Q9Y2G7 519 aa1.18□□□□□ -2.22
VBP1-203ENST00000535916 NOP16Q9Y3C1 178 aaKnown RBP1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms