RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 NBEAL2Q6ZNJ1 2754 aa11.34□□□□□ -0.59
CNN1-202ENST00000535659 C7orf71A4D174 169 aa11.34□□□□□ -0.59
CNN1-202ENST00000535659 C9JQL5 133 aa11.34□□□□□ -0.59
CNN1-202ENST00000535659 SPRY2O43597 315 aa11.34□□□□□ -0.59
CNN1-202ENST00000535659 INSP01308 110 aa11.34□□□□□ -0.59
CNN1-202ENST00000535659 BAGE2Q86Y30 109 aa11.34□□□□□ -0.59
CNN1-202ENST00000535659 C1orf158Q8N1D5 194 aa11.34□□□□□ -0.59
CNN1-202ENST00000535659 C8orf49Q96NF6 230 aa11.34□□□□□ -0.59
CNN1-202ENST00000535659 TM2D3Q9BRN9 247 aa11.34□□□□□ -0.59
CNN1-202ENST00000535659 TRAV12-3A0A0B4J271 114 aa11.33□□□□□ -0.6
CNN1-202ENST00000535659 CEBPGP53567 150 aa11.33□□□□□ -0.6
CNN1-202ENST00000535659 SMUG1Q53HV7 270 aa11.33□□□□□ -0.6
CNN1-202ENST00000535659 PRR9Q5T870 116 aa11.33□□□□□ -0.6
CNN1-202ENST00000535659 C20orf144Q9BQM9 153 aa11.33□□□□□ -0.6
CNN1-202ENST00000535659 SPATA25Q9BR10 227 aa11.33□□□□□ -0.6
CNN1-202ENST00000535659 OVOL2Q9BRP0 275 aa11.33□□□□□ -0.6
CNN1-202ENST00000535659 TP53TG1Q9Y2A0 90 aa11.33□□□□□ -0.6
CNN1-202ENST00000535659 ZNF324O75467 553 aaPredicted RBP11.32□□□□□ -0.6
CNN1-202ENST00000535659 BTN1A1Q13410 526 aa11.32□□□□□ -0.6
CNN1-202ENST00000535659 COX8CQ7Z4L0 72 aa11.32□□□□□ -0.6
CNN1-202ENST00000535659 TMEM183AQ8IXX5 376 aa11.32□□□□□ -0.6
CNN1-202ENST00000535659 PARLQ9H300 379 aa11.32□□□□□ -0.6
CNN1-202ENST00000535659 GOLT1BQ9Y3E0 138 aa11.32□□□□□ -0.6
CNN1-202ENST00000535659 LINC00862A6NCI5 91 aa11.31□□□□□ -0.6
CNN1-202ENST00000535659 NHLRC4P0CG21 123 aaPredicted RBP11.31□□□□□ -0.6
CNN1-202ENST00000535659 RBMY1A1P0DJD3 496 aaKnown RBP11.31□□□□□ -0.6
CNN1-202ENST00000535659 RBMY1CP0DJD4 496 aa11.31□□□□□ -0.6
CNN1-202ENST00000535659 GNG4P50150 75 aa11.31□□□□□ -0.6
CNN1-202ENST00000535659 RBMY1FQ15415 496 aaKnown RBP11.31□□□□□ -0.6
CNN1-202ENST00000535659 ZNF674Q2M3X9 581 aa11.31□□□□□ -0.6
CNN1-202ENST00000535659 Q6AWC8 147 aa11.31□□□□□ -0.6
CNN1-202ENST00000535659 ZNF705AQ6ZN79 300 aaPredicted RBP11.31□□□□□ -0.6
CNN1-202ENST00000535659 TMEM256Q8N2U0 113 aa11.31□□□□□ -0.6
CNN1-202ENST00000535659 LINC01587Q99440 93 aa11.31□□□□□ -0.6
CNN1-202ENST00000535659 NIPSNAP3BQ9BS92 247 aa11.31□□□□□ -0.6
CNN1-202ENST00000535659 TMEM208Q9BTX3 173 aa11.31□□□□□ -0.6
CNN1-202ENST00000535659 MLST8Q9BVC4 326 aa11.31□□□□□ -0.6
CNN1-202ENST00000535659 ZMAT4Q9H898 229 aa11.31□□□□□ -0.6
CNN1-202ENST00000535659 IGHV3OR16-12A0A075B7B8 117 aa11.3□□□□□ -0.6
CNN1-202ENST00000535659 GCGP01275 180 aa11.3□□□□□ -0.6
CNN1-202ENST00000535659 CENPWQ5EE01 88 aa11.3□□□□□ -0.6
CNN1-202ENST00000535659 OR11H2Q8NH07 326 aa11.3□□□□□ -0.6
CNN1-202ENST00000535659 RETNQ9HD89 108 aa11.3□□□□□ -0.6
CNN1-202ENST00000535659 TRBV20OR9-2A0A075B6H5 130 aa11.3□□□□□ -0.6
CNN1-202ENST00000535659 TRAV21A0A0B4J279 112 aa11.3□□□□□ -0.6
CNN1-202ENST00000535659 C9JCJ5 164 aa11.3□□□□□ -0.6
CNN1-202ENST00000535659 H7BYZ3 331 aa11.3□□□□□ -0.6
CNN1-202ENST00000535659 ZNF80P51504 273 aaPredicted RBP11.3□□□□□ -0.6
CNN1-202ENST00000535659 Q6ZQT7 251 aa11.3□□□□□ -0.6
CNN1-202ENST00000535659 NHLRC2Q8NBF2 726 aa11.3□□□□□ -0.6
CNN1-202ENST00000535659 ZC2HC1AQ96GY0 325 aa11.3□□□□□ -0.6
CNN1-202ENST00000535659 FABP5P3A8MUU1 101 aa11.29□□□□□ -0.6
CNN1-202ENST00000535659 ZNF727A8MUV8 499 aa11.29□□□□□ -0.6
CNN1-202ENST00000535659 IGLV2-8P01709 118 aa11.29□□□□□ -0.6
CNN1-202ENST00000535659 CRIP1P50238 77 aa11.29□□□□□ -0.6
CNN1-202ENST00000535659 UQCC3Q6UW78 93 aa11.29□□□□□ -0.6
CNN1-202ENST00000535659 COMMD7Q86VX2 200 aa11.29□□□□□ -0.6
CNN1-202ENST00000535659 SMIM12Q96EX1 92 aa11.29□□□□□ -0.6
CNN1-202ENST00000535659 SMIM9A6NGZ8 99 aa11.28□□□□□ -0.6
CNN1-202ENST00000535659 PFN1P07737 140 aaKnown RBP11.28□□□□□ -0.6
CNN1-202ENST00000535659 FAM74A3Q4VXF1 159 aa11.28□□□□□ -0.6
CNN1-202ENST00000535659 EIF4E3Q8N5X7 224 aaKnown RBP11.28□□□□□ -0.6
CNN1-202ENST00000535659 OCC1Q8TAD7 63 aa11.28□□□□□ -0.6
CNN1-202ENST00000535659 NEU1Q99519 415 aa11.28□□□□□ -0.6
CNN1-202ENST00000535659 SMIM7Q9BQ49 75 aa11.28□□□□□ -0.6
CNN1-202ENST00000535659 PYGO2Q9BRQ0 406 aa11.28□□□□□ -0.6
CNN1-202ENST00000535659 X6R8D5 127 aa11.28□□□□□ -0.6
CNN1-202ENST00000535659 PGPEP1LA6NFU8 196 aa11.27□□□□□ -0.61
CNN1-202ENST00000535659 HTN1P15515 57 aa11.27□□□□□ -0.61
CNN1-202ENST00000535659 SOHLH1Q5JUK2 328 aa11.27□□□□□ -0.61
CNN1-202ENST00000535659 ZNF705GA8MUZ8 300 aaPredicted RBP11.26□□□□□ -0.61
CNN1-202ENST00000535659 MGST1P10620 155 aaKnown RBP11.26□□□□□ -0.61
CNN1-202ENST00000535659 FAM162BQ5T6X4 162 aa11.26□□□□□ -0.61
CNN1-202ENST00000535659 LINC00467Q9BRT7 94 aa11.26□□□□□ -0.61
CNN1-202ENST00000535659 IGHV1OR15-1A0A075B7D0 117 aa11.25□□□□□ -0.61
CNN1-202ENST00000535659 PRM2P04554 102 aa11.25□□□□□ -0.61
CNN1-202ENST00000535659 SFTA3P0C7M3 94 aa11.25□□□□□ -0.61
CNN1-202ENST00000535659 MIFP14174 115 aa11.25□□□□□ -0.61
CNN1-202ENST00000535659 TMEM241Q24JQ0 296 aa11.25□□□□□ -0.61
CNN1-202ENST00000535659 RRN3P1Q2M238 152 aa11.25□□□□□ -0.61
CNN1-202ENST00000535659 MUC21Q5SSG8 566 aa11.25□□□□□ -0.61
CNN1-202ENST00000535659 FAM159AQ6UWV7 190 aa11.25□□□□□ -0.61
CNN1-202ENST00000535659 BIN3Q9NQY0 253 aa11.25□□□□□ -0.61
CNN1-202ENST00000535659 LY96Q9Y6Y9 160 aa11.25□□□□□ -0.61
CNN1-202ENST00000535659 SH2D1AO60880 128 aa11.25□□□□□ -0.61
CNN1-202ENST00000535659 AZU1P20160 251 aa11.25□□□□□ -0.61
CNN1-202ENST00000535659 TDRG1Q3Y452 100 aa11.25□□□□□ -0.61
CNN1-202ENST00000535659 PRR27Q6MZM9 219 aa11.25□□□□□ -0.61
CNN1-202ENST00000535659 C11orf21Q9P2W6 132 aa11.25□□□□□ -0.61
CNN1-202ENST00000535659 COL7A1Q02388 2944 aa11.24□□□□□ -0.61
CNN1-202ENST00000535659 ANXA2RQ3ZCQ2 193 aa11.24□□□□□ -0.61
CNN1-202ENST00000535659 KCNS1Q96KK3 526 aa11.24□□□□□ -0.61
CNN1-202ENST00000535659 NAGKQ9UJ70 344 aa11.24□□□□□ -0.61
CNN1-202ENST00000535659 TMEM218A2RU14 115 aa11.23□□□□□ -0.61
CNN1-202ENST00000535659 CBY3A6NI87 242 aa11.23□□□□□ -0.61
CNN1-202ENST00000535659 K7EN84 100 aa11.23□□□□□ -0.61
CNN1-202ENST00000535659 ORM1P02763 201 aa11.23□□□□□ -0.61
CNN1-202ENST00000535659 OR5I1Q13606 314 aa11.23□□□□□ -0.61
CNN1-202ENST00000535659 ZNF493Q6ZR52 646 aa11.23□□□□□ -0.61
CNN1-202ENST00000535659 DAZAP1Q96EP5 407 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms