RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 FSTL3O95633 263 aa5.14□□□□□ -1.59
USP28-202ENST00000535607 NCR2O95944 276 aa5.14□□□□□ -1.59
USP28-202ENST00000535607 LHBP01229 141 aa5.14□□□□□ -1.59
USP28-202ENST00000535607 SPINK8P0C7L1 97 aa5.14□□□□□ -1.59
USP28-202ENST00000535607 GNLYP22749 145 aa5.14□□□□□ -1.59
USP28-202ENST00000535607 FCGR2BP31994 310 aaPredicted RBP5.14□□□□□ -1.59
USP28-202ENST00000535607 CRYBA4P53673 196 aa5.14□□□□□ -1.59
USP28-202ENST00000535607 RRN3P1Q2M238 152 aa5.14□□□□□ -1.59
USP28-202ENST00000535607 C5orf64Q2M2E5 130 aa5.14□□□□□ -1.59
USP28-202ENST00000535607 C12orf74Q32Q52 190 aa5.14□□□□□ -1.59
USP28-202ENST00000535607 PVRIGQ6DKI7 326 aa5.14□□□□□ -1.59
USP28-202ENST00000535607 Q6ZSV7 163 aa5.14□□□□□ -1.59
USP28-202ENST00000535607 MOB3BQ86TA1 216 aa5.14□□□□□ -1.59
USP28-202ENST00000535607 LINC00311Q8N616 119 aa5.14□□□□□ -1.59
USP28-202ENST00000535607 DLX4Q92988 240 aaPredicted RBP5.14□□□□□ -1.59
USP28-202ENST00000535607 RPEQ96AT9 228 aa5.14□□□□□ -1.59
USP28-202ENST00000535607 RASL11BQ9BPW5 248 aa5.14□□□□□ -1.59
USP28-202ENST00000535607 SPANXDQ9BXN6 97 aa5.14□□□□□ -1.59
USP28-202ENST00000535607 NGBQ9NPG2 151 aa5.14□□□□□ -1.59
USP28-202ENST00000535607 TPRP12270 2363 aaKnown RBP5.14□□□□□ -1.59
USP28-202ENST00000535607 MED12LQ86YW9 2145 aa5.14□□□□□ -1.59
USP28-202ENST00000535607 DIDO1Q9BTC0 2240 aaKnown RBP5.13□□□□□ -1.59
USP28-202ENST00000535607 TRBV25-1A0A075B6N4 114 aa5.13□□□□□ -1.59
USP28-202ENST00000535607 TRAV26-1A0A087WT03 109 aa5.13□□□□□ -1.59
USP28-202ENST00000535607 K7EMI3 77 aa5.13□□□□□ -1.59
USP28-202ENST00000535607 IGLV1-44P01699 117 aa5.13□□□□□ -1.59
USP28-202ENST00000535607 IGHV3-13P01766 116 aa5.13□□□□□ -1.59
USP28-202ENST00000535607 PRSS2P07478 247 aa5.13□□□□□ -1.59
USP28-202ENST00000535607 CECR9P0C854 216 aa5.13□□□□□ -1.59
USP28-202ENST00000535607 RPL27AP46776 148 aaKnown RBP5.13□□□□□ -1.59
USP28-202ENST00000535607 LYZP61626 148 aa5.13□□□□□ -1.59
USP28-202ENST00000535607 ADORA2A-AS1P86434 159 aa5.13□□□□□ -1.59
USP28-202ENST00000535607 LY6DQ14210 128 aa5.13□□□□□ -1.59
USP28-202ENST00000535607 CFAP161Q6P656 301 aa5.13□□□□□ -1.59
USP28-202ENST00000535607 LYZL1Q6UWQ5 148 aa5.13□□□□□ -1.59
USP28-202ENST00000535607 LINC00322Q6ZN03 302 aaPredicted RBP5.13□□□□□ -1.59
USP28-202ENST00000535607 ZNRF1Q8ND25 227 aa5.13□□□□□ -1.59
USP28-202ENST00000535607 PPDPFLQ8WWR9 84 aa5.13□□□□□ -1.59
USP28-202ENST00000535607 LEAP2Q969E1 77 aa5.13□□□□□ -1.59
USP28-202ENST00000535607 SPAG8Q99932 426 aaPredicted RBP5.13□□□□□ -1.59
USP28-202ENST00000535607 FAM110AQ9BQ89 295 aa5.13□□□□□ -1.59
USP28-202ENST00000535607 NAA38Q9BRA0 125 aaKnown RBP5.13□□□□□ -1.59
USP28-202ENST00000535607 MCRIP2Q9BUT9 160 aaKnown RBP5.13□□□□□ -1.59
USP28-202ENST00000535607 RAB1BQ9H0U4 201 aa5.13□□□□□ -1.59
USP28-202ENST00000535607 TP73-AS1Q9UF72 201 aa5.13□□□□□ -1.59
USP28-202ENST00000535607 FAM215AQ9Y5M1 114 aa5.13□□□□□ -1.59
USP28-202ENST00000535607 ZNF407Q9C0G0 2248 aa5.13□□□□□ -1.59
USP28-202ENST00000535607 DNAJC13O75165 2243 aa5.12□□□□□ -1.59
USP28-202ENST00000535607 TRBV19A0A075B6N1 114 aa5.12□□□□□ -1.59
USP28-202ENST00000535607 IGHV3OR15-7A0A075B7D8 119 aa5.12□□□□□ -1.59
USP28-202ENST00000535607 IGKV1-16P04430 117 aa5.12□□□□□ -1.59
USP28-202ENST00000535607 IGKV2-30P06310 120 aa5.12□□□□□ -1.59
USP28-202ENST00000535607 MYOD1P15172 320 aa5.12□□□□□ -1.59
USP28-202ENST00000535607 CD24P25063 80 aa5.12□□□□□ -1.59
USP28-202ENST00000535607 GLRXP35754 106 aa5.12□□□□□ -1.59
USP28-202ENST00000535607 LEPP41159 167 aa5.12□□□□□ -1.59
USP28-202ENST00000535607 FXYD2P54710 66 aa5.12□□□□□ -1.59
USP28-202ENST00000535607 TNFAIP6P98066 277 aaPredicted RBP5.12□□□□□ -1.59
USP28-202ENST00000535607 WT1-ASQ06250 92 aa5.12□□□□□ -1.59
USP28-202ENST00000535607 GAGE5Q13069 117 aa5.12□□□□□ -1.59
USP28-202ENST00000535607 GAGE6Q13070 117 aa5.12□□□□□ -1.59
USP28-202ENST00000535607 WFDC2Q14508 124 aa5.12□□□□□ -1.59
USP28-202ENST00000535607 MRPL51Q4U2R6 128 aaKnown RBP5.12□□□□□ -1.59
USP28-202ENST00000535607 PRR30Q53SZ7 412 aaPredicted RBP5.12□□□□□ -1.59
USP28-202ENST00000535607 ZFAND6Q6FIF0 208 aa5.12□□□□□ -1.59
USP28-202ENST00000535607 COX8CQ7Z4L0 72 aa5.12□□□□□ -1.59
USP28-202ENST00000535607 PCP2Q8IVA1 136 aa5.12□□□□□ -1.59
USP28-202ENST00000535607 TEX29Q8N6K0 151 aa5.12□□□□□ -1.59
USP28-202ENST00000535607 Q8N8P6 123 aa5.12□□□□□ -1.59
USP28-202ENST00000535607 CNEP1R1Q8N9A8 125 aa5.12□□□□□ -1.59
USP28-202ENST00000535607 C9orf106Q8NAJ2 232 aa5.12□□□□□ -1.59
USP28-202ENST00000535607 OR11H6Q8NGC7 330 aa5.12□□□□□ -1.59
USP28-202ENST00000535607 ZC2HC1AQ96GY0 325 aa5.12□□□□□ -1.59
USP28-202ENST00000535607 SGK494Q96LW2 274 aa5.12□□□□□ -1.59
USP28-202ENST00000535607 ANAPC13Q9BS18 74 aa5.12□□□□□ -1.59
USP28-202ENST00000535607 SHANK2-AS3Q9BTD1 123 aa5.12□□□□□ -1.59
USP28-202ENST00000535607 MRPL20Q9BYC9 149 aaKnown RBP5.12□□□□□ -1.59
USP28-202ENST00000535607 ERG28Q9UKR5 140 aa5.12□□□□□ -1.59
USP28-202ENST00000535607 EPG5Q9HCE0 2579 aa5.12□□□□□ -1.59
USP28-202ENST00000535607 IGSF10Q6WRI0 2623 aa5.12□□□□□ -1.59
USP28-202ENST00000535607 MED12Q93074 2177 aa5.12□□□□□ -1.59
USP28-202ENST00000535607 A0A096LNJ9 63 aa5.11□□□□□ -1.59
USP28-202ENST00000535607 TRAV12-1A0A0B4J245 112 aa5.11□□□□□ -1.59
USP28-202ENST00000535607 TSPAN13O95857 204 aa5.11□□□□□ -1.59
USP28-202ENST00000535607 IGLV2-11P01706 119 aa5.11□□□□□ -1.59
USP28-202ENST00000535607 ASIPP42127 132 aa5.11□□□□□ -1.59
USP28-202ENST00000535607 ADIPOQQ15848 244 aa5.11□□□□□ -1.59
USP28-202ENST00000535607 ETDBQ3ZM63 59 aa5.11□□□□□ -1.59
USP28-202ENST00000535607 PAPPA-AS1Q5QFB9 102 aa5.11□□□□□ -1.59
USP28-202ENST00000535607 ZC2HC1BQ5TFG8 222 aa5.11□□□□□ -1.59
USP28-202ENST00000535607 AMN1Q8IY45 258 aa5.11□□□□□ -1.59
USP28-202ENST00000535607 PHLDA1Q8WV24 401 aaPredicted RBP5.11□□□□□ -1.59
USP28-202ENST00000535607 TMEM158Q8WZ71 300 aa5.11□□□□□ -1.59
USP28-202ENST00000535607 RNF5Q99942 180 aa5.11□□□□□ -1.59
USP28-202ENST00000535607 FOXC2Q99958 501 aa5.11□□□□□ -1.59
USP28-202ENST00000535607 PROCRQ9UNN8 238 aa5.11□□□□□ -1.59
USP28-202ENST00000535607 KMT2BQ9UMN6 2715 aaPredicted RBP5.1□□□□□ -1.59
USP28-202ENST00000535607 A0A087WX48 190 aa5.1□□□□□ -1.59
USP28-202ENST00000535607 IGHV1-18A0A0C4DH31 117 aa5.1□□□□□ -1.59
USP28-202ENST00000535607 IGHV4-28A0A0C4DH34 117 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms