RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 OR11H12B2RN74 326 aa12.44□□□□□ -0.42
MCF2L-232ENST00000535094 IGLV1-47P01700 117 aa12.44□□□□□ -0.42
MCF2L-232ENST00000535094 DLX6P56179 175 aa12.44□□□□□ -0.42
MCF2L-232ENST00000535094 DYNAPQ8N1N2 210 aa12.44□□□□□ -0.42
MCF2L-232ENST00000535094 OR11H1Q8NG94 326 aa12.44□□□□□ -0.42
MCF2L-232ENST00000535094 OR11H2Q8NH07 326 aa12.44□□□□□ -0.42
MCF2L-232ENST00000535094 WFDC12Q8WWY7 111 aa12.44□□□□□ -0.42
MCF2L-232ENST00000535094 A0A096LNJ9 63 aa12.44□□□□□ -0.42
MCF2L-232ENST00000535094 NXT2Q9NPJ8 142 aaKnown RBP12.44□□□□□ -0.42
MCF2L-232ENST00000535094 TSSC4Q9Y5U2 329 aaPredicted RBP12.44□□□□□ -0.42
MCF2L-232ENST00000535094 CCL21O00585 134 aa12.43□□□□□ -0.42
MCF2L-232ENST00000535094 DTX2Q86UW9 622 aa12.43□□□□□ -0.42
MCF2L-232ENST00000535094 H7C2G1 150 aa12.43□□□□□ -0.42
MCF2L-232ENST00000535094 SCGB1C2P0DMR2 95 aa12.43□□□□□ -0.42
MCF2L-232ENST00000535094 WFDC2Q14508 124 aa12.43□□□□□ -0.42
MCF2L-232ENST00000535094 TNFRSF14Q92956 283 aa12.43□□□□□ -0.42
MCF2L-232ENST00000535094 NPFFR1Q9GZQ6 430 aa12.43□□□□□ -0.42
MCF2L-232ENST00000535094 TRBV25-1A0A075B6N4 114 aa12.43□□□□□ -0.42
MCF2L-232ENST00000535094 GRNP28799 593 aaKnown RBP12.43□□□□□ -0.42
MCF2L-232ENST00000535094 SCGB3A1Q96QR1 104 aa12.43□□□□□ -0.42
MCF2L-232ENST00000535094 MRGPRG-AS1Q2M3A8 158 aa12.42□□□□□ -0.42
MCF2L-232ENST00000535094 SETD2Q9BYW2 2564 aaPredicted RBP12.42□□□□□ -0.42
MCF2L-232ENST00000535094 AKAP13Q12802 2813 aa12.42□□□□□ -0.42
MCF2L-232ENST00000535094 TRGV3P03979 118 aa12.42□□□□□ -0.42
MCF2L-232ENST00000535094 MRPL16Q9NX20 251 aaKnown RBP12.42□□□□□ -0.42
MCF2L-232ENST00000535094 MYO9AB2RTY4 2548 aa12.41□□□□□ -0.42
MCF2L-232ENST00000535094 NACAE9PAV3 2078 aa12.41□□□□□ -0.42
MCF2L-232ENST00000535094 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.41□□□□□ -0.42
MCF2L-232ENST00000535094 SIGMAR1Q99720 223 aa12.41□□□□□ -0.42
MCF2L-232ENST00000535094 ATP5LO75964 103 aa12.41□□□□□ -0.42
MCF2L-232ENST00000535094 FGF6P10767 208 aa12.4□□□□□ -0.42
MCF2L-232ENST00000535094 AZU1P20160 251 aa12.4□□□□□ -0.42
MCF2L-232ENST00000535094 SHISA9B4DS77 424 aa12.4□□□□□ -0.42
MCF2L-232ENST00000535094 G3V4G9 280 aa12.4□□□□□ -0.42
MCF2L-232ENST00000535094 CFHR4Q92496 578 aa12.4□□□□□ -0.42
MCF2L-232ENST00000535094 UBTD1Q9HAC8 227 aa12.4□□□□□ -0.42
MCF2L-232ENST00000535094 G3V318 75 aa12.4□□□□□ -0.43
MCF2L-232ENST00000535094 PHLDA3Q9Y5J5 127 aa12.4□□□□□ -0.43
MCF2L-232ENST00000535094 ZZEF1O43149 2961 aa12.39□□□□□ -0.43
MCF2L-232ENST00000535094 USP9YO00507 2555 aaPredicted RBP12.39□□□□□ -0.43
MCF2L-232ENST00000535094 PDE6HQ13956 83 aa12.39□□□□□ -0.43
MCF2L-232ENST00000535094 PRO3102Q9H379 93 aa12.39□□□□□ -0.43
MCF2L-232ENST00000535094 CD300EQ496F6 205 aaPredicted RBP12.39□□□□□ -0.43
MCF2L-232ENST00000535094 DEFB1P60022 68 aa12.39□□□□□ -0.43
MCF2L-232ENST00000535094 LAGE3Q14657 143 aa12.39□□□□□ -0.43
MCF2L-232ENST00000535094 NEGR1Q7Z3B1 354 aa12.39□□□□□ -0.43
MCF2L-232ENST00000535094 KAAG1Q9UBP8 84 aa12.39□□□□□ -0.43
MCF2L-232ENST00000535094 CCDC144NLQ6NUI1 221 aa12.38□□□□□ -0.43
MCF2L-232ENST00000535094 METTL26Q96S19 204 aa12.38□□□□□ -0.43
MCF2L-232ENST00000535094 RAXQ9Y2V3 346 aa12.38□□□□□ -0.43
MCF2L-232ENST00000535094 PSMB2P49721 201 aa12.38□□□□□ -0.43
MCF2L-232ENST00000535094 ODF1Q14990 250 aa12.38□□□□□ -0.43
MCF2L-232ENST00000535094 C3orf36Q3SXR2 165 aa12.38□□□□□ -0.43
MCF2L-232ENST00000535094 C14orf178Q8N769 122 aaPredicted RBP12.38□□□□□ -0.43
MCF2L-232ENST00000535094 TLN2Q9Y4G6 2542 aa12.38□□□□□ -0.43
MCF2L-232ENST00000535094 SRD5A1P18405 259 aa12.38□□□□□ -0.43
MCF2L-232ENST00000535094 GAGE13Q4V321 117 aa12.38□□□□□ -0.43
MCF2L-232ENST00000535094 TMEM219Q86XT9 240 aa12.38□□□□□ -0.43
MCF2L-232ENST00000535094 FANCD2OSQ96PS1 177 aa12.38□□□□□ -0.43
MCF2L-232ENST00000535094 TNRC18O15417 2968 aaPredicted RBP12.37□□□□□ -0.43
MCF2L-232ENST00000535094 CRYGBP07316 175 aa12.37□□□□□ -0.43
MCF2L-232ENST00000535094 Q6ZQT7 251 aa12.37□□□□□ -0.43
MCF2L-232ENST00000535094 WNK1Q9H4A3 2382 aa12.37□□□□□ -0.43
MCF2L-232ENST00000535094 IGHV3-11P01762 117 aa12.37□□□□□ -0.43
MCF2L-232ENST00000535094 ZNF562Q6V9R5 426 aa12.37□□□□□ -0.43
MCF2L-232ENST00000535094 VMO1Q7Z5L0 202 aa12.37□□□□□ -0.43
MCF2L-232ENST00000535094 IGKV3-20P01619 116 aa12.36□□□□□ -0.43
MCF2L-232ENST00000535094 ZNF493Q6ZR52 646 aa12.36□□□□□ -0.43
MCF2L-232ENST00000535094 PIP4P2Q8N4L2 257 aa12.36□□□□□ -0.43
MCF2L-232ENST00000535094 FAM74A4Q5TZK3 123 aa12.36□□□□□ -0.43
MCF2L-232ENST00000535094 CEND1Q8N111 149 aa12.36□□□□□ -0.43
MCF2L-232ENST00000535094 C8orf31Q8N9H6 132 aa12.36□□□□□ -0.43
MCF2L-232ENST00000535094 CSMD1Q96PZ7 3565 aa12.36□□□□□ -0.43
MCF2L-232ENST00000535094 CTSGP08311 255 aa12.35□□□□□ -0.43
MCF2L-232ENST00000535094 HTN1P15515 57 aa12.35□□□□□ -0.43
MCF2L-232ENST00000535094 SRSF1Q07955 248 aaKnown RBP eCLIP12.35□□□□□ -0.43
MCF2L-232ENST00000535094 AGPAT4-IT1Q9H0P7 198 aa12.35□□□□□ -0.43
MCF2L-232ENST00000535094 ZNF815PA8K554 130 aa12.35□□□□□ -0.43
MCF2L-232ENST00000535094 PGPEP1Q9NXJ5 209 aa12.35□□□□□ -0.43
MCF2L-232ENST00000535094 CHTOPQ9Y3Y2 248 aaKnown RBP12.35□□□□□ -0.43
MCF2L-232ENST00000535094 Q1RN00 199 aa12.34□□□□□ -0.43
MCF2L-232ENST00000535094 MAPKAPK5-AS1Q8N8E1 139 aa12.34□□□□□ -0.43
MCF2L-232ENST00000535094 TMEM170BQ5T4T1 132 aa12.34□□□□□ -0.43
MCF2L-232ENST00000535094 ASH1LQ9NR48 2969 aaKnown RBP12.34□□□□□ -0.43
MCF2L-232ENST00000535094 WI2-2373I1.2A0A1W2PRP0 233 aa12.34□□□□□ -0.43
MCF2L-232ENST00000535094 CEACAM4O75871 244 aa12.34□□□□□ -0.43
MCF2L-232ENST00000535094 RNASE4P34096 147 aaKnown RBP12.34□□□□□ -0.43
MCF2L-232ENST00000535094 IGFL3Q6UXB1 125 aa12.34□□□□□ -0.43
MCF2L-232ENST00000535094 ATP5G2Q06055 141 aa12.33□□□□□ -0.43
MCF2L-232ENST00000535094 C12orf74Q32Q52 190 aa12.33□□□□□ -0.43
MCF2L-232ENST00000535094 UFSP1Q6NVU6 142 aa12.33□□□□□ -0.43
MCF2L-232ENST00000535094 SIVA1O15304 175 aa12.33□□□□□ -0.44
MCF2L-232ENST00000535094 CLEC2AQ6UVW9 174 aa12.33□□□□□ -0.44
MCF2L-232ENST00000535094 IGLV11-55A0A075B6I3 123 aa12.33□□□□□ -0.44
MCF2L-232ENST00000535094 PIP4P1Q86T03 277 aa12.33□□□□□ -0.44
MCF2L-232ENST00000535094 Q8N8P6 123 aa12.33□□□□□ -0.44
MCF2L-232ENST00000535094 HIVEP3Q5T1R4 2406 aa12.33□□□□□ -0.44
MCF2L-232ENST00000535094 GAGE12HA6NDE8 117 aa12.32□□□□□ -0.44
MCF2L-232ENST00000535094 HOXA3O43365 443 aaPredicted RBP12.32□□□□□ -0.44
MCF2L-232ENST00000535094 CIDEAO60543 219 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms