RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 PSMG3Q9BT73 122 aaPredicted RBP3.52□□□□□ -1.85
USH1C-210ENST00000534556 NDUFAF3Q9BU61 184 aa3.52□□□□□ -1.85
USH1C-210ENST00000534556 KRTAP1-5Q9BYS1 174 aa3.52□□□□□ -1.85
USH1C-210ENST00000534556 MDFICQ9P1T7 246 aa3.52□□□□□ -1.85
USH1C-210ENST00000534556 RNF24Q9Y225 148 aa3.52□□□□□ -1.85
USH1C-210ENST00000534556 TIMM8BQ9Y5J9 83 aaPredicted RBP3.52□□□□□ -1.85
USH1C-210ENST00000534556 IGHV1OR15-1A0A075B7D0 117 aa3.51□□□□□ -1.85
USH1C-210ENST00000534556 RBAKDNA6NC62 111 aa3.51□□□□□ -1.85
USH1C-210ENST00000534556 F5H768 121 aa3.51□□□□□ -1.85
USH1C-210ENST00000534556 F6UZH7 168 aa3.51□□□□□ -1.85
USH1C-210ENST00000534556 ARPC5O15511 151 aa3.51□□□□□ -1.85
USH1C-210ENST00000534556 GNRH2O43555 120 aa3.51□□□□□ -1.85
USH1C-210ENST00000534556 SPINK4O60575 86 aa3.51□□□□□ -1.85
USH1C-210ENST00000534556 GPX1P07203 203 aa3.51□□□□□ -1.85
USH1C-210ENST00000534556 NMBP08949 121 aa3.51□□□□□ -1.85
USH1C-210ENST00000534556 CDC34P49427 236 aaPredicted RBP3.51□□□□□ -1.85
USH1C-210ENST00000534556 FHITP49789 147 aa3.51□□□□□ -1.85
USH1C-210ENST00000534556 FGF8P55075 233 aaPredicted RBP3.51□□□□□ -1.85
USH1C-210ENST00000534556 TCL1AP56279 114 aa3.51□□□□□ -1.85
USH1C-210ENST00000534556 DAZ2Q13117 558 aaKnown RBP3.51□□□□□ -1.85
USH1C-210ENST00000534556 ZNF266Q14584 549 aa3.51□□□□□ -1.85
USH1C-210ENST00000534556 ANXA2RQ3ZCQ2 193 aa3.51□□□□□ -1.85
USH1C-210ENST00000534556 TMEM78Q5T7P6 136 aa3.51□□□□□ -1.85
USH1C-210ENST00000534556 Q6AWC8 147 aa3.51□□□□□ -1.85
USH1C-210ENST00000534556 PQLC2Q6ZP29 291 aa3.51□□□□□ -1.85
USH1C-210ENST00000534556 GOLT1AQ6ZVE7 132 aa3.51□□□□□ -1.85
USH1C-210ENST00000534556 LYPD1Q8N2G4 141 aa3.51□□□□□ -1.85
USH1C-210ENST00000534556 EIF4E3Q8N5X7 224 aaKnown RBP3.51□□□□□ -1.85
USH1C-210ENST00000534556 TMEM75Q8N9X5 138 aa3.51□□□□□ -1.85
USH1C-210ENST00000534556 ST6GAL2Q96JF0 529 aa3.51□□□□□ -1.85
USH1C-210ENST00000534556 AAMDCQ9H7C9 122 aa3.51□□□□□ -1.85
USH1C-210ENST00000534556 OTORQ9NRC9 128 aa3.51□□□□□ -1.85
USH1C-210ENST00000534556 KCNIP2Q9NS61 270 aa3.51□□□□□ -1.85
USH1C-210ENST00000534556 MRPL16Q9NX20 251 aaKnown RBP3.51□□□□□ -1.85
USH1C-210ENST00000534556 RPH3ALQ9UNE2 315 aa3.51□□□□□ -1.85
USH1C-210ENST00000534556 LINC00588Q9Y4M8 146 aa3.51□□□□□ -1.85
USH1C-210ENST00000534556 DNAH8Q96JB1 4490 aa3.5□□□□□ -1.85
USH1C-210ENST00000534556 TRAV26-1A0A087WT03 109 aa3.5□□□□□ -1.85
USH1C-210ENST00000534556 A0A096LPF7 62 aa3.5□□□□□ -1.85
USH1C-210ENST00000534556 TRAV34A0A0B4J273 112 aa3.5□□□□□ -1.85
USH1C-210ENST00000534556 A0A0J9YY99 117 aa3.5□□□□□ -1.85
USH1C-210ENST00000534556 TEX48A0A1B0GUV7 120 aa3.5□□□□□ -1.85
USH1C-210ENST00000534556 A0A1W2PPV4 95 aa3.5□□□□□ -1.85
USH1C-210ENST00000534556 NUDT3O95989 172 aa3.5□□□□□ -1.85
USH1C-210ENST00000534556 IGHV3-53P01767 116 aa3.5□□□□□ -1.85
USH1C-210ENST00000534556 ATP5G1P05496 136 aa3.5□□□□□ -1.85
USH1C-210ENST00000534556 SFTA3P0C7M3 94 aa3.5□□□□□ -1.85
USH1C-210ENST00000534556 P0DMU3 169 aa3.5□□□□□ -1.85
USH1C-210ENST00000534556 FAM231AP0DMU4 169 aa3.5□□□□□ -1.85
USH1C-210ENST00000534556 FAM231CP0DMU5 169 aa3.5□□□□□ -1.85
USH1C-210ENST00000534556 ATP5G3P48201 142 aa3.5□□□□□ -1.85
USH1C-210ENST00000534556 SUMO1P63165 101 aaKnown RBP3.5□□□□□ -1.85
USH1C-210ENST00000534556 SERF2P84101 59 aa3.5□□□□□ -1.85
USH1C-210ENST00000534556 FHL2Q14192 279 aa3.5□□□□□ -1.85
USH1C-210ENST00000534556 ESRGQ1W209 222 aa3.5□□□□□ -1.85
USH1C-210ENST00000534556 DPPA3Q6W0C5 159 aa3.5□□□□□ -1.85
USH1C-210ENST00000534556 KCNRGQ8N5I3 272 aa3.5□□□□□ -1.85
USH1C-210ENST00000534556 ZNRF2Q8NHG8 242 aa3.5□□□□□ -1.85
USH1C-210ENST00000534556 FAM210BQ96KR6 192 aa3.5□□□□□ -1.85
USH1C-210ENST00000534556 VPS13BQ7Z7G8 4022 aa3.5□□□□□ -1.85
USH1C-210ENST00000534556 HERC1Q15751 4861 aa3.5□□□□□ -1.85
USH1C-210ENST00000534556 TRGV1A0A0A0MS02 117 aa3.49□□□□□ -1.85
USH1C-210ENST00000534556 IGHV3-16A0A0C4DH30 117 aa3.49□□□□□ -1.85
USH1C-210ENST00000534556 TRBV7-9A0A0J9YWB2 115 aa3.49□□□□□ -1.85
USH1C-210ENST00000534556 LOC100131303A0A0U1RQF7 123 aa3.49□□□□□ -1.85
USH1C-210ENST00000534556 FAM74A7A6NL05 159 aa3.49□□□□□ -1.85
USH1C-210ENST00000534556 SNURFLB1AK76 121 aa3.49□□□□□ -1.85
USH1C-210ENST00000534556 TCRAP04437 139 aa3.49□□□□□ -1.85
USH1C-210ENST00000534556 TYMSP04818 313 aa3.49□□□□□ -1.85
USH1C-210ENST00000534556 CRIP1P50238 77 aa3.49□□□□□ -1.85
USH1C-210ENST00000534556 TAS2R45P59539 299 aa3.49□□□□□ -1.85
USH1C-210ENST00000534556 UBE2G2P60604 165 aa3.49□□□□□ -1.85
USH1C-210ENST00000534556 OR5I1Q13606 314 aa3.49□□□□□ -1.85
USH1C-210ENST00000534556 TMEM183BQ1AE95 376 aa3.49□□□□□ -1.85
USH1C-210ENST00000534556 LGALS9BQ3B8N2 356 aa3.49□□□□□ -1.85
USH1C-210ENST00000534556 TDRG1Q3Y452 100 aa3.49□□□□□ -1.85
USH1C-210ENST00000534556 LGALSLQ3ZCW2 172 aaPredicted RBP3.49□□□□□ -1.85
USH1C-210ENST00000534556 RNF212Q495C1 297 aa3.49□□□□□ -1.85
USH1C-210ENST00000534556 IBA57Q5T440 356 aaKnown RBP3.49□□□□□ -1.85
USH1C-210ENST00000534556 Q6ZNX1 250 aa3.49□□□□□ -1.85
USH1C-210ENST00000534556 CCDC28AQ8IWP9 274 aa3.49□□□□□ -1.85
USH1C-210ENST00000534556 TMEM183AQ8IXX5 376 aa3.49□□□□□ -1.85
USH1C-210ENST00000534556 ARL6IP6Q8N6S5 226 aa3.49□□□□□ -1.85
USH1C-210ENST00000534556 INO80EQ8NBZ0 244 aaPredicted RBP3.49□□□□□ -1.85
USH1C-210ENST00000534556 RXFP4Q8TDU9 374 aa3.49□□□□□ -1.85
USH1C-210ENST00000534556 TMED6Q8WW62 240 aa3.49□□□□□ -1.85
USH1C-210ENST00000534556 ASB13Q8WXK3 278 aa3.49□□□□□ -1.85
USH1C-210ENST00000534556 ZNF479Q96JC4 524 aa3.49□□□□□ -1.85
USH1C-210ENST00000534556 C18orf15Q96N68 181 aa3.49□□□□□ -1.85
USH1C-210ENST00000534556 Q9UF83 564 aa3.49□□□□□ -1.85
USH1C-210ENST00000534556 EPDR1Q9UM22 224 aa3.49□□□□□ -1.85
USH1C-210ENST00000534556 LENEPQ9Y5L5 61 aa3.49□□□□□ -1.85
USH1C-210ENST00000534556 CTXND1A0A1B0GTU2 59 aa3.48□□□□□ -1.85
USH1C-210ENST00000534556 A0A1B0GVG6 124 aa3.48□□□□□ -1.85
USH1C-210ENST00000534556 HMSDA8MTL9 139 aa3.48□□□□□ -1.85
USH1C-210ENST00000534556 RGS13O14921 159 aa3.48□□□□□ -1.85
USH1C-210ENST00000534556 CXorf1O96002 111 aa3.48□□□□□ -1.85
USH1C-210ENST00000534556 RNASE3P12724 160 aaKnown RBP3.48□□□□□ -1.85
USH1C-210ENST00000534556 CSN1S1P47710 185 aa3.48□□□□□ -1.85
USH1C-210ENST00000534556 CCL20P78556 96 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms