RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 ZNF726P1Q15940 193 aa6.65□□□□□ -1.34
SSBP3-215ENST00000533946 RNF212Q495C1 297 aa6.65□□□□□ -1.34
SSBP3-215ENST00000533946 CCDC28AQ8IWP9 274 aa6.65□□□□□ -1.34
SSBP3-215ENST00000533946 EIF4E3Q8N5X7 224 aaKnown RBP6.65□□□□□ -1.34
SSBP3-215ENST00000533946 SCGB1C1Q8TD33 95 aa6.65□□□□□ -1.34
SSBP3-215ENST00000533946 C8orf49Q96NF6 230 aa6.65□□□□□ -1.34
SSBP3-215ENST00000533946 C20orf144Q9BQM9 153 aa6.65□□□□□ -1.34
SSBP3-215ENST00000533946 PYGO2Q9BRQ0 406 aa6.65□□□□□ -1.34
SSBP3-215ENST00000533946 PRELID1Q9Y255 219 aa6.65□□□□□ -1.34
SSBP3-215ENST00000533946 FAT1Q14517 4588 aa6.65□□□□□ -1.35
SSBP3-215ENST00000533946 IGHV1OR15-1A0A075B7D0 117 aa6.64□□□□□ -1.35
SSBP3-215ENST00000533946 NBDYA0A0U1RRE5 68 aa6.64□□□□□ -1.35
SSBP3-215ENST00000533946 SNURFLB1AK76 121 aa6.64□□□□□ -1.35
SSBP3-215ENST00000533946 IFNA5P01569 189 aa6.64□□□□□ -1.35
SSBP3-215ENST00000533946 ARL14EPLP0DKL9 152 aa6.64□□□□□ -1.35
SSBP3-215ENST00000533946 TCL1AP56279 114 aa6.64□□□□□ -1.35
SSBP3-215ENST00000533946 TMEM78Q5T7P6 136 aa6.64□□□□□ -1.35
SSBP3-215ENST00000533946 RPL7L1Q6DKI1 246 aaKnown RBP6.64□□□□□ -1.35
SSBP3-215ENST00000533946 GOLT1AQ6ZVE7 132 aa6.64□□□□□ -1.35
SSBP3-215ENST00000533946 OR10G4Q8NGN3 311 aa6.64□□□□□ -1.35
SSBP3-215ENST00000533946 OR10G9Q8NGN4 311 aa6.64□□□□□ -1.35
SSBP3-215ENST00000533946 OR10G7Q8NGN6 311 aa6.64□□□□□ -1.35
SSBP3-215ENST00000533946 GNPNAT1Q96EK6 184 aaPredicted RBP6.64□□□□□ -1.35
SSBP3-215ENST00000533946 LINC00479Q96M42 142 aa6.64□□□□□ -1.35
SSBP3-215ENST00000533946 MED28Q9H204 178 aa6.64□□□□□ -1.35
SSBP3-215ENST00000533946 AAMDCQ9H7C9 122 aa6.64□□□□□ -1.35
SSBP3-215ENST00000533946 RNF24Q9Y225 148 aa6.64□□□□□ -1.35
SSBP3-215ENST00000533946 LOC100131303A0A0U1RQF7 123 aa6.63□□□□□ -1.35
SSBP3-215ENST00000533946 C17orf112F2Z3M2 114 aa6.63□□□□□ -1.35
SSBP3-215ENST00000533946 PTTG1O95997 202 aa6.63□□□□□ -1.35
SSBP3-215ENST00000533946 M6PRP20645 277 aa6.63□□□□□ -1.35
SSBP3-215ENST00000533946 FHL2Q14192 279 aa6.63□□□□□ -1.35
SSBP3-215ENST00000533946 ZNF266Q14584 549 aa6.63□□□□□ -1.35
SSBP3-215ENST00000533946 TMEM183BQ1AE95 376 aa6.63□□□□□ -1.35
SSBP3-215ENST00000533946 ANXA2RQ3ZCQ2 193 aa6.63□□□□□ -1.35
SSBP3-215ENST00000533946 TMEM183AQ8IXX5 376 aa6.63□□□□□ -1.35
SSBP3-215ENST00000533946 TMEM75Q8N9X5 138 aa6.63□□□□□ -1.35
SSBP3-215ENST00000533946 C15orf53Q8NAA6 179 aa6.63□□□□□ -1.35
SSBP3-215ENST00000533946 RXFP4Q8TDU9 374 aa6.63□□□□□ -1.35
SSBP3-215ENST00000533946 RAB24Q969Q5 203 aa6.63□□□□□ -1.35
SSBP3-215ENST00000533946 ZNF479Q96JC4 524 aa6.63□□□□□ -1.35
SSBP3-215ENST00000533946 AQP10Q96PS8 301 aa6.63□□□□□ -1.35
SSBP3-215ENST00000533946 LINC00467Q9BRT7 94 aa6.63□□□□□ -1.35
SSBP3-215ENST00000533946 ATG101Q9BSB4 218 aa6.63□□□□□ -1.35
SSBP3-215ENST00000533946 TRGV2A0A075B6R0 118 aa6.62□□□□□ -1.35
SSBP3-215ENST00000533946 GGTLC3B5MD39 225 aa6.62□□□□□ -1.35
SSBP3-215ENST00000533946 RGS13O14921 159 aa6.62□□□□□ -1.35
SSBP3-215ENST00000533946 IGLV2-11P01706 119 aa6.62□□□□□ -1.35
SSBP3-215ENST00000533946 KHDC3LQ587J8 217 aa6.62□□□□□ -1.35
SSBP3-215ENST00000533946 C1orf134Q5TEV5 83 aa6.62□□□□□ -1.35
SSBP3-215ENST00000533946 Q9H8V8 135 aa6.62□□□□□ -1.35
SSBP3-215ENST00000533946 OTORQ9NRC9 128 aa6.62□□□□□ -1.35
SSBP3-215ENST00000533946 CYTL1Q9NRR1 136 aa6.62□□□□□ -1.35
SSBP3-215ENST00000533946 NAGKQ9UJ70 344 aa6.62□□□□□ -1.35
SSBP3-215ENST00000533946 FXYD6-FXYD2A0A087WZ82 144 aa6.61□□□□□ -1.35
SSBP3-215ENST00000533946 TRAV34A0A0B4J273 112 aa6.61□□□□□ -1.35
SSBP3-215ENST00000533946 STAG3L2P0CL84 134 aa6.61□□□□□ -1.35
SSBP3-215ENST00000533946 STAG3L3P0CL85 134 aa6.61□□□□□ -1.35
SSBP3-215ENST00000533946 GCHFRP30047 84 aa6.61□□□□□ -1.35
SSBP3-215ENST00000533946 FGF8P55075 233 aaPredicted RBP6.61□□□□□ -1.35
SSBP3-215ENST00000533946 ACOT6Q3I5F7 207 aaPredicted RBP6.61□□□□□ -1.35
SSBP3-215ENST00000533946 Q6AWC8 147 aa6.61□□□□□ -1.35
SSBP3-215ENST00000533946 DPPA3Q6W0C5 159 aa6.61□□□□□ -1.35
SSBP3-215ENST00000533946 LINC00336Q6ZUF6 198 aa6.61□□□□□ -1.35
SSBP3-215ENST00000533946 OR11H4Q8NGC9 324 aa6.61□□□□□ -1.35
SSBP3-215ENST00000533946 TNFSF18Q9UNG2 199 aa6.61□□□□□ -1.35
SSBP3-215ENST00000533946 IGHV3-16A0A0C4DH30 117 aa6.6□□□□□ -1.35
SSBP3-215ENST00000533946 TYMSP04818 313 aa6.6□□□□□ -1.35
SSBP3-215ENST00000533946 NMBP08949 121 aa6.6□□□□□ -1.35
SSBP3-215ENST00000533946 GIPP09681 153 aaPredicted RBP6.6□□□□□ -1.35
SSBP3-215ENST00000533946 PET100P0DJ07 73 aa6.6□□□□□ -1.35
SSBP3-215ENST00000533946 CDC34P49427 236 aaPredicted RBP6.6□□□□□ -1.35
SSBP3-215ENST00000533946 FHITP49789 147 aa6.6□□□□□ -1.35
SSBP3-215ENST00000533946 KRTAP10-2P60368 255 aa6.6□□□□□ -1.35
SSBP3-215ENST00000533946 LYPD1Q8N2G4 141 aa6.6□□□□□ -1.35
SSBP3-215ENST00000533946 OR2T35Q8NGX2 323 aa6.6□□□□□ -1.35
SSBP3-215ENST00000533946 OR2G3Q8NGZ4 309 aa6.6□□□□□ -1.35
SSBP3-215ENST00000533946 SUN5Q8TC36 379 aa6.6□□□□□ -1.35
SSBP3-215ENST00000533946 ST6GAL2Q96JF0 529 aa6.6□□□□□ -1.35
SSBP3-215ENST00000533946 KCNIP2Q9NS61 270 aa6.6□□□□□ -1.35
SSBP3-215ENST00000533946 Q9UF83 564 aa6.6□□□□□ -1.35
SSBP3-215ENST00000533946 DNAH8Q96JB1 4490 aa6.6□□□□□ -1.35
SSBP3-215ENST00000533946 A0A1W2PPV4 95 aa6.59□□□□□ -1.35
SSBP3-215ENST00000533946 RBAKDNA6NC62 111 aa6.59□□□□□ -1.35
SSBP3-215ENST00000533946 CSN1S1P47710 185 aa6.59□□□□□ -1.35
SSBP3-215ENST00000533946 CRYBA4P53673 196 aa6.59□□□□□ -1.35
SSBP3-215ENST00000533946 CCL18P55774 89 aa6.59□□□□□ -1.35
SSBP3-215ENST00000533946 UBE2G2P60604 165 aa6.59□□□□□ -1.35
SSBP3-215ENST00000533946 SUMO1P63165 101 aaKnown RBP6.59□□□□□ -1.35
SSBP3-215ENST00000533946 ZNF680Q8NEM1 530 aa6.59□□□□□ -1.35
SSBP3-215ENST00000533946 PAX4O43316 350 aa6.58□□□□□ -1.36
SSBP3-215ENST00000533946 TCRAP04437 139 aa6.58□□□□□ -1.36
SSBP3-215ENST00000533946 TAS2R45P59539 299 aa6.58□□□□□ -1.36
SSBP3-215ENST00000533946 IBA57Q5T440 356 aaKnown RBP6.58□□□□□ -1.36
SSBP3-215ENST00000533946 PQLC2Q6ZP29 291 aa6.58□□□□□ -1.36
SSBP3-215ENST00000533946 Q6ZSN1 163 aa6.58□□□□□ -1.36
SSBP3-215ENST00000533946 C6orf223Q8N319 242 aa6.58□□□□□ -1.36
SSBP3-215ENST00000533946 C18orf15Q96N68 181 aa6.58□□□□□ -1.36
SSBP3-215ENST00000533946 ARPC5LQ9BPX5 153 aa6.58□□□□□ -1.36
SSBP3-215ENST00000533946 TREM1Q9NP99 234 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 154.8 ms