RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 RNF212Q495C1 297 aa8.2□□□□□ -1.1
CCDC90B-218ENST00000533761 IGFL4Q6B9Z1 124 aa8.2□□□□□ -1.1
CCDC90B-218ENST00000533761 CDPF1Q6NVV7 123 aa8.2□□□□□ -1.1
CCDC90B-218ENST00000533761 FAM231DQ6ZW35 169 aa8.2□□□□□ -1.1
CCDC90B-218ENST00000533761 TMEM61Q8N0U2 210 aa8.2□□□□□ -1.1
CCDC90B-218ENST00000533761 OR10G8Q8NGN5 311 aa8.2□□□□□ -1.1
CCDC90B-218ENST00000533761 IMMP2LQ96T52 175 aa8.2□□□□□ -1.1
CCDC90B-218ENST00000533761 GPR61Q9BZJ8 451 aa8.2□□□□□ -1.1
CCDC90B-218ENST00000533761 OSTCQ9NRP0 149 aa8.2□□□□□ -1.1
CCDC90B-218ENST00000533761 NOTCH3Q9UM47 2321 aa8.2□□□□□ -1.1
CCDC90B-218ENST00000533761 PGPEP1LA6NFU8 196 aa8.19□□□□□ -1.1
CCDC90B-218ENST00000533761 ZNF705FA8MVS1 300 aaPredicted RBP8.19□□□□□ -1.1
CCDC90B-218ENST00000533761 DUSP14O95147 198 aaKnown RBP8.19□□□□□ -1.1
CCDC90B-218ENST00000533761 IGLV2-11P01706 119 aa8.19□□□□□ -1.1
CCDC90B-218ENST00000533761 BTN1A1Q13410 526 aa8.19□□□□□ -1.1
CCDC90B-218ENST00000533761 CD300EQ496F6 205 aaPredicted RBP8.19□□□□□ -1.1
CCDC90B-218ENST00000533761 PSMG4Q5JS54 123 aa8.19□□□□□ -1.1
CCDC90B-218ENST00000533761 C9orf66Q5T8R8 295 aa8.19□□□□□ -1.1
CCDC90B-218ENST00000533761 PRR27Q6MZM9 219 aa8.19□□□□□ -1.1
CCDC90B-218ENST00000533761 OR8A1Q8NGG7 326 aa8.19□□□□□ -1.1
CCDC90B-218ENST00000533761 MLST8Q9BVC4 326 aa8.19□□□□□ -1.1
CCDC90B-218ENST00000533761 ZNF492Q9P255 531 aa8.19□□□□□ -1.1
CCDC90B-218ENST00000533761 TRRAPQ9Y4A5 3859 aa8.19□□□□□ -1.1
CCDC90B-218ENST00000533761 ANK2Q01484 3957 aa8.18□□□□□ -1.1
CCDC90B-218ENST00000533761 XKRY2A2RUG3 117 aa8.18□□□□□ -1.1
CCDC90B-218ENST00000533761 P01737 135 aa8.18□□□□□ -1.1
CCDC90B-218ENST00000533761 ZNF688P0C7X2 276 aa8.18□□□□□ -1.1
CCDC90B-218ENST00000533761 EDN2P20800 178 aa8.18□□□□□ -1.1
CCDC90B-218ENST00000533761 HLA-DMBP28068 263 aa8.18□□□□□ -1.1
CCDC90B-218ENST00000533761 HIST1H1AQ02539 215 aaPredicted RBP8.18□□□□□ -1.1
CCDC90B-218ENST00000533761 FAM162BQ5T6X4 162 aa8.18□□□□□ -1.1
CCDC90B-218ENST00000533761 ATRAIDQ6UW56 229 aa8.18□□□□□ -1.1
CCDC90B-218ENST00000533761 ADAMTSL5Q6ZMM2 481 aa8.18□□□□□ -1.1
CCDC90B-218ENST00000533761 FOXI2Q6ZQN5 318 aa8.18□□□□□ -1.1
CCDC90B-218ENST00000533761 COX8CQ7Z4L0 72 aa8.18□□□□□ -1.1
CCDC90B-218ENST00000533761 NHLRC2Q8NBF2 726 aa8.18□□□□□ -1.1
CCDC90B-218ENST00000533761 SGK494Q96LW2 274 aa8.18□□□□□ -1.1
CCDC90B-218ENST00000533761 PRR25Q96S07 402 aa8.18□□□□□ -1.1
CCDC90B-218ENST00000533761 AURKAIP1Q9NWT8 199 aaPredicted RBP8.18□□□□□ -1.1
CCDC90B-218ENST00000533761 ZNF705GA8MUZ8 300 aaPredicted RBP8.18□□□□□ -1.1
CCDC90B-218ENST00000533761 NPIPB6E9PJ23 425 aa8.18□□□□□ -1.1
CCDC90B-218ENST00000533761 K7EN84 100 aa8.18□□□□□ -1.1
CCDC90B-218ENST00000533761 IGLL1P15814 213 aa8.18□□□□□ -1.1
CCDC90B-218ENST00000533761 TMEM88Q6PEY1 159 aa8.18□□□□□ -1.1
CCDC90B-218ENST00000533761 OR4B1Q8NGF8 309 aa8.18□□□□□ -1.1
CCDC90B-218ENST00000533761 ODF3Q96PU9 254 aa8.18□□□□□ -1.1
CCDC90B-218ENST00000533761 ASCL2Q99929 193 aa8.18□□□□□ -1.1
CCDC90B-218ENST00000533761 VGLL1Q99990 258 aa8.18□□□□□ -1.1
CCDC90B-218ENST00000533761 GATCO43716 136 aaKnown RBP8.17□□□□□ -1.1
CCDC90B-218ENST00000533761 IGLV1-51P01701 117 aa8.17□□□□□ -1.1
CCDC90B-218ENST00000533761 IGLV2-8P01709 118 aa8.17□□□□□ -1.1
CCDC90B-218ENST00000533761 TSPOP30536 169 aa8.17□□□□□ -1.1
CCDC90B-218ENST00000533761 CT83Q5H943 113 aa8.17□□□□□ -1.1
CCDC90B-218ENST00000533761 C20orf173Q96LM9 149 aa8.17□□□□□ -1.1
CCDC90B-218ENST00000533761 FAM110AQ9BQ89 295 aa8.17□□□□□ -1.1
CCDC90B-218ENST00000533761 AGPAT4-IT1Q9H0P7 198 aa8.17□□□□□ -1.1
CCDC90B-218ENST00000533761 TRAV9-1A0A075B6T8 112 aa8.16□□□□□ -1.1
CCDC90B-218ENST00000533761 A8MWL6 223 aa8.16□□□□□ -1.1
CCDC90B-218ENST00000533761 PRAC2D3DTV9 90 aa8.16□□□□□ -1.1
CCDC90B-218ENST00000533761 SCO1O75880 301 aa8.16□□□□□ -1.1
CCDC90B-218ENST00000533761 LEPP41159 167 aa8.16□□□□□ -1.1
CCDC90B-218ENST00000533761 PCP4P48539 62 aa8.16□□□□□ -1.1
CCDC90B-218ENST00000533761 OR5I1Q13606 314 aa8.16□□□□□ -1.1
CCDC90B-218ENST00000533761 CBLN2Q8IUK8 224 aa8.16□□□□□ -1.1
CCDC90B-218ENST00000533761 Q8TAT8 98 aa8.16□□□□□ -1.1
CCDC90B-218ENST00000533761 SAV1Q9H4B6 383 aaPredicted RBP8.16□□□□□ -1.1
CCDC90B-218ENST00000533761 RPP21Q9H633 154 aaKnown RBP8.16□□□□□ -1.1
CCDC90B-218ENST00000533761 MGAM2Q2M2H8 2515 aa8.16□□□□□ -1.1
CCDC90B-218ENST00000533761 A0A0J9YX75 114 aa8.15□□□□□ -1.1
CCDC90B-218ENST00000533761 FABP5P3A8MUU1 101 aa8.15□□□□□ -1.1
CCDC90B-218ENST00000533761 OR11H12B2RN74 326 aa8.15□□□□□ -1.1
CCDC90B-218ENST00000533761 PFN1P07737 140 aaKnown RBP8.15□□□□□ -1.1
CCDC90B-218ENST00000533761 RPS20P60866 119 aaKnown RBP8.15□□□□□ -1.1
CCDC90B-218ENST00000533761 ERCC8Q13216 396 aa8.15□□□□□ -1.1
CCDC90B-218ENST00000533761 Q6AWC8 147 aa8.15□□□□□ -1.1
CCDC90B-218ENST00000533761 ZC2HC1AQ96GY0 325 aa8.15□□□□□ -1.1
CCDC90B-218ENST00000533761 RNASE7Q9H1E1 156 aaKnown RBP8.15□□□□□ -1.1
CCDC90B-218ENST00000533761 FAM231BA6NCW3 169 aa8.14□□□□□ -1.11
CCDC90B-218ENST00000533761 GPX1P07203 203 aa8.14□□□□□ -1.11
CCDC90B-218ENST00000533761 DEFB131AP59861 70 aa8.14□□□□□ -1.11
CCDC90B-218ENST00000533761 GTSCR1Q86UQ5 136 aa8.14□□□□□ -1.11
CCDC90B-218ENST00000533761 NUDT10Q8NFP7 164 aa8.14□□□□□ -1.11
CCDC90B-218ENST00000533761 NUDT11Q96G61 164 aa8.14□□□□□ -1.11
CCDC90B-218ENST00000533761 GFRA4Q9GZZ7 299 aa8.14□□□□□ -1.11
CCDC90B-218ENST00000533761 IL36BQ9NZH7 164 aa8.14□□□□□ -1.11
CCDC90B-218ENST00000533761 SELENOKQ9Y6D0 94 aa8.14□□□□□ -1.11
CCDC90B-218ENST00000533761 TRAV21A0A0B4J279 112 aa8.14□□□□□ -1.11
CCDC90B-218ENST00000533761 C19orf71A6NCJ1 209 aa8.14□□□□□ -1.11
CCDC90B-218ENST00000533761 CIDEAO60543 219 aa8.14□□□□□ -1.11
CCDC90B-218ENST00000533761 HLA-DRB4P13762 266 aa8.14□□□□□ -1.11
CCDC90B-218ENST00000533761 CRISP2P16562 243 aa8.14□□□□□ -1.11
CCDC90B-218ENST00000533761 NUTF2P61970 127 aaKnown RBP8.14□□□□□ -1.11
CCDC90B-218ENST00000533761 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.14□□□□□ -1.11
CCDC90B-218ENST00000533761 TSKUQ8WUA8 353 aa8.14□□□□□ -1.11
CCDC90B-218ENST00000533761 MAP6D1Q9H9H5 199 aa8.14□□□□□ -1.11
CCDC90B-218ENST00000533761 NAT8BQ9UHF3 227 aa8.14□□□□□ -1.11
CCDC90B-218ENST00000533761 ZNF256Q9Y2P7 627 aaPredicted RBP8.14□□□□□ -1.11
CCDC90B-218ENST00000533761 URGCP-MRPS24S4R325 110 aa8.14□□□□□ -1.11
CCDC90B-218ENST00000533761 V9GYV3 84 aa8.14□□□□□ -1.11
CCDC90B-218ENST00000533761 HLA-DRB4X5D2U9 266 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms