RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 C20orf144Q9BQM9 153 aa12.44□□□□□ -0.42
SMG1-203ENST00000532700 TMEM167BQ9NRX6 74 aa12.44□□□□□ -0.42
SMG1-203ENST00000532700 KLLNB2CW77 178 aa12.43□□□□□ -0.42
SMG1-203ENST00000532700 TPT1P13693 172 aaKnown RBP12.43□□□□□ -0.42
SMG1-203ENST00000532700 RNF212Q495C1 297 aa12.43□□□□□ -0.42
SMG1-203ENST00000532700 ZNF493Q6ZR52 646 aa12.43□□□□□ -0.42
SMG1-203ENST00000532700 CMTM2Q8TAZ6 248 aa12.43□□□□□ -0.42
SMG1-203ENST00000532700 KRTAP17-1Q9BYP8 105 aa12.43□□□□□ -0.42
SMG1-203ENST00000532700 PKHD1P08F94 4074 aa12.43□□□□□ -0.42
SMG1-203ENST00000532700 GAGE12BA1L429 117 aa12.42□□□□□ -0.42
SMG1-203ENST00000532700 PGPA6NDG6 321 aa12.42□□□□□ -0.42
SMG1-203ENST00000532700 PRSS29PA6NIE9 313 aa12.42□□□□□ -0.42
SMG1-203ENST00000532700 UMAD1C9J7I0 102 aa12.42□□□□□ -0.42
SMG1-203ENST00000532700 ZNF324O75467 553 aaPredicted RBP12.42□□□□□ -0.42
SMG1-203ENST00000532700 GAGE7O76087 117 aa12.42□□□□□ -0.42
SMG1-203ENST00000532700 NUDT3O95989 172 aa12.42□□□□□ -0.42
SMG1-203ENST00000532700 GAGE12FP0CL80 117 aa12.42□□□□□ -0.42
SMG1-203ENST00000532700 GAGE12GP0CL81 117 aa12.42□□□□□ -0.42
SMG1-203ENST00000532700 GAGE12IP0CL82 117 aa12.42□□□□□ -0.42
SMG1-203ENST00000532700 LGALSLQ3ZCW2 172 aaPredicted RBP12.42□□□□□ -0.42
SMG1-203ENST00000532700 TMEM78Q5T7P6 136 aa12.42□□□□□ -0.42
SMG1-203ENST00000532700 C9orf47Q6ZRZ4 202 aa12.42□□□□□ -0.42
SMG1-203ENST00000532700 Q6ZTI0 123 aa12.42□□□□□ -0.42
SMG1-203ENST00000532700 ZFAND2AQ8N6M9 145 aa12.42□□□□□ -0.42
SMG1-203ENST00000532700 ARL6IP6Q8N6S5 226 aa12.42□□□□□ -0.42
SMG1-203ENST00000532700 C11orf72Q8NBR9 251 aa12.42□□□□□ -0.42
SMG1-203ENST00000532700 SUN5Q8TC36 379 aa12.42□□□□□ -0.42
SMG1-203ENST00000532700 C7orf71A4D174 169 aa12.41□□□□□ -0.42
SMG1-203ENST00000532700 RBAKDNA6NC62 111 aa12.41□□□□□ -0.42
SMG1-203ENST00000532700 SLC25A5P05141 298 aaKnown RBP12.41□□□□□ -0.42
SMG1-203ENST00000532700 IQCF2Q8IXL9 164 aa12.41□□□□□ -0.42
SMG1-203ENST00000532700 C15orf53Q8NAA6 179 aa12.41□□□□□ -0.42
SMG1-203ENST00000532700 Q8TAT8 98 aa12.41□□□□□ -0.42
SMG1-203ENST00000532700 STOML3Q8TAV4 291 aa12.41□□□□□ -0.42
SMG1-203ENST00000532700 TP53TG3Q9ULZ0 132 aa12.41□□□□□ -0.42
SMG1-203ENST00000532700 LINC00588Q9Y4M8 146 aa12.41□□□□□ -0.42
SMG1-203ENST00000532700 DIRC3C9JPN6 131 aa12.4□□□□□ -0.42
SMG1-203ENST00000532700 RNASE4P34096 147 aaKnown RBP12.4□□□□□ -0.42
SMG1-203ENST00000532700 ZNF726P1Q15940 193 aa12.4□□□□□ -0.42
SMG1-203ENST00000532700 ZFP69Q49AA0 526 aa12.4□□□□□ -0.42
SMG1-203ENST00000532700 EIF5AL1Q6IS14 154 aaKnown RBP12.4□□□□□ -0.42
SMG1-203ENST00000532700 LINC00336Q6ZUF6 198 aa12.4□□□□□ -0.42
SMG1-203ENST00000532700 SSX7Q7RTT5 188 aa12.4□□□□□ -0.42
SMG1-203ENST00000532700 ZNRF2Q8NHG8 242 aa12.4□□□□□ -0.42
SMG1-203ENST00000532700 TMPRSS5Q9H3S3 457 aa12.4□□□□□ -0.42
SMG1-203ENST00000532700 GSN-AS1Q9NRJ2 163 aa12.4□□□□□ -0.42
SMG1-203ENST00000532700 A0A0J9YY99 117 aa12.39□□□□□ -0.43
SMG1-203ENST00000532700 A0A1B0GVG6 124 aa12.39□□□□□ -0.43
SMG1-203ENST00000532700 DPPA3Q6W0C5 159 aa12.39□□□□□ -0.43
SMG1-203ENST00000532700 KLF12Q9Y4X4 402 aa12.39□□□□□ -0.43
SMG1-203ENST00000532700 TRAV26-1A0A087WT03 109 aa12.38□□□□□ -0.43
SMG1-203ENST00000532700 MAP1LC3B2A6NCE7 125 aa12.38□□□□□ -0.43
SMG1-203ENST00000532700 NMBP08949 121 aa12.38□□□□□ -0.43
SMG1-203ENST00000532700 CRISP2P16562 243 aa12.38□□□□□ -0.43
SMG1-203ENST00000532700 ZNF138P52744 262 aa12.38□□□□□ -0.43
SMG1-203ENST00000532700 PYGO2Q9BRQ0 406 aa12.38□□□□□ -0.43
SMG1-203ENST00000532700 MAP1LC3BQ9GZQ8 125 aa12.38□□□□□ -0.43
SMG1-203ENST00000532700 ZNF492Q9P255 531 aa12.38□□□□□ -0.43
SMG1-203ENST00000532700 DYNC1H1Q14204 4646 aaKnown RBP12.38□□□□□ -0.43
SMG1-203ENST00000532700 TRBV7-9A0A0J9YWB2 115 aa12.37□□□□□ -0.43
SMG1-203ENST00000532700 A0A1W2PRE2 83 aa12.37□□□□□ -0.43
SMG1-203ENST00000532700 OR5I1Q13606 314 aa12.37□□□□□ -0.43
SMG1-203ENST00000532700 SLC51BQ86UW2 128 aa12.37□□□□□ -0.43
SMG1-203ENST00000532700 CCDC28AQ8IWP9 274 aa12.37□□□□□ -0.43
SMG1-203ENST00000532700 C5orf17Q8NAS9 161 aa12.37□□□□□ -0.43
SMG1-203ENST00000532700 TMED6Q8WW62 240 aa12.37□□□□□ -0.43
SMG1-203ENST00000532700 KRTAP1-5Q9BYS1 174 aa12.37□□□□□ -0.43
SMG1-203ENST00000532700 RPH3ALQ9UNE2 315 aa12.37□□□□□ -0.43
SMG1-203ENST00000532700 SERTM2A0A1B0GWG4 89 aa12.36□□□□□ -0.43
SMG1-203ENST00000532700 SNURFLB1AK76 121 aa12.36□□□□□ -0.43
SMG1-203ENST00000532700 K7EQM0 130 aa12.36□□□□□ -0.43
SMG1-203ENST00000532700 GPX1P07203 203 aa12.36□□□□□ -0.43
SMG1-203ENST00000532700 FHITP49789 147 aa12.36□□□□□ -0.43
SMG1-203ENST00000532700 FGF8P55075 233 aaPredicted RBP12.36□□□□□ -0.43
SMG1-203ENST00000532700 DAZ2Q13117 558 aaKnown RBP12.36□□□□□ -0.43
SMG1-203ENST00000532700 FAM213BQ8TBF2 198 aa12.36□□□□□ -0.43
SMG1-203ENST00000532700 ATG101Q9BSB4 218 aa12.36□□□□□ -0.43
SMG1-203ENST00000532700 NKX6-2Q9C056 277 aaPredicted RBP12.36□□□□□ -0.43
SMG1-203ENST00000532700 RAB5CP51148 216 aa12.35□□□□□ -0.43
SMG1-203ENST00000532700 SUMO1P63165 101 aaKnown RBP12.35□□□□□ -0.43
SMG1-203ENST00000532700 GOLT1AQ6ZVE7 132 aa12.35□□□□□ -0.43
SMG1-203ENST00000532700 C9orf62Q8N4C0 152 aa12.35□□□□□ -0.43
SMG1-203ENST00000532700 SFT2D1Q8WV19 159 aa12.35□□□□□ -0.43
SMG1-203ENST00000532700 MBD3L1Q8WWY6 194 aa12.35□□□□□ -0.43
SMG1-203ENST00000532700 VSIG2Q96IQ7 327 aa12.35□□□□□ -0.43
SMG1-203ENST00000532700 LINC00467Q9BRT7 94 aa12.35□□□□□ -0.43
SMG1-203ENST00000532700 LENEPQ9Y5L5 61 aa12.35□□□□□ -0.43
SMG1-203ENST00000532700 DNAH11Q96DT5 4516 aa12.34□□□□□ -0.43
SMG1-203ENST00000532700 EIF4E3Q8N5X7 224 aaKnown RBP12.34□□□□□ -0.43
SMG1-203ENST00000532700 NBDYA0A0U1RRE5 68 aa12.33□□□□□ -0.44
SMG1-203ENST00000532700 TCRAP04437 139 aa12.33□□□□□ -0.44
SMG1-203ENST00000532700 H2AFB1P0C5Y9 115 aa12.33□□□□□ -0.44
SMG1-203ENST00000532700 UBE2G2P60604 165 aa12.33□□□□□ -0.44
SMG1-203ENST00000532700 GNG5P63218 68 aa12.33□□□□□ -0.44
SMG1-203ENST00000532700 ANXA2RQ3ZCQ2 193 aa12.33□□□□□ -0.44
SMG1-203ENST00000532700 ZNF575Q86XF7 245 aa12.33□□□□□ -0.44
SMG1-203ENST00000532700 MRPL16Q9NX20 251 aaKnown RBP12.33□□□□□ -0.44
SMG1-203ENST00000532700 EPDR1Q9UM22 224 aa12.33□□□□□ -0.44
SMG1-203ENST00000532700 TRGV1A0A0A0MS02 117 aa12.32□□□□□ -0.44
SMG1-203ENST00000532700 GGTLC3B5MD39 225 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms