RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 CCL20P78556 96 aa13.33□□□□□ -0.28
SSH3-209ENST00000532600 ALKAL2Q6UX46 152 aa13.33□□□□□ -0.28
SSH3-209ENST00000532600 TMEM256Q8N2U0 113 aa13.33□□□□□ -0.28
SSH3-209ENST00000532600 PKD1P98161 4303 aa13.32□□□□□ -0.28
SSH3-209ENST00000532600 DIRC3C9JPN6 131 aa13.32□□□□□ -0.28
SSH3-209ENST00000532600 H2AFB1P0C5Y9 115 aa13.32□□□□□ -0.28
SSH3-209ENST00000532600 RAB5CP51148 216 aa13.32□□□□□ -0.28
SSH3-209ENST00000532600 Q6ZR54 194 aa13.32□□□□□ -0.28
SSH3-209ENST00000532600 RNASE8Q8TDE3 154 aaKnown RBP13.32□□□□□ -0.28
SSH3-209ENST00000532600 FAM19A4Q96LR4 140 aa13.32□□□□□ -0.28
SSH3-209ENST00000532600 PPP1R14DQ9NXH3 145 aa13.32□□□□□ -0.28
SSH3-209ENST00000532600 A0A1W2PRE2 83 aa13.31□□□□□ -0.28
SSH3-209ENST00000532600 FAM74A7A6NL05 159 aa13.31□□□□□ -0.28
SSH3-209ENST00000532600 GFI1BQ5VTD9 330 aa13.31□□□□□ -0.28
SSH3-209ENST00000532600 C9orf47Q6ZRZ4 202 aa13.31□□□□□ -0.28
SSH3-209ENST00000532600 RPH3ALQ9UNE2 315 aa13.31□□□□□ -0.28
SSH3-209ENST00000532600 IGLV2-18A0A075B6J9 118 aa13.3□□□□□ -0.28
SSH3-209ENST00000532600 HTN1P15515 57 aa13.3□□□□□ -0.28
SSH3-209ENST00000532600 CSN1S1P47710 185 aa13.3□□□□□ -0.28
SSH3-209ENST00000532600 SUMO1P63165 101 aaKnown RBP13.3□□□□□ -0.28
SSH3-209ENST00000532600 LGALS9BQ3B8N2 356 aa13.3□□□□□ -0.28
SSH3-209ENST00000532600 Q8TAT8 98 aa13.3□□□□□ -0.28
SSH3-209ENST00000532600 PKHD1P08F94 4074 aa13.29□□□□□ -0.28
SSH3-209ENST00000532600 TRAV1-1A0A0B4J248 108 aa13.29□□□□□ -0.28
SSH3-209ENST00000532600 SLC25A5P05141 298 aaKnown RBP13.29□□□□□ -0.28
SSH3-209ENST00000532600 RNF212Q495C1 297 aa13.29□□□□□ -0.28
SSH3-209ENST00000532600 LINC00336Q6ZUF6 198 aa13.29□□□□□ -0.28
SSH3-209ENST00000532600 GOLT1AQ6ZVE7 132 aa13.29□□□□□ -0.28
SSH3-209ENST00000532600 CMTM2Q8TAZ6 248 aa13.29□□□□□ -0.28
SSH3-209ENST00000532600 RXFP4Q8TDU9 374 aa13.29□□□□□ -0.28
SSH3-209ENST00000532600 C16orf74Q96GX8 76 aa13.29□□□□□ -0.28
SSH3-209ENST00000532600 ODF3Q96PU9 254 aa13.29□□□□□ -0.28
SSH3-209ENST00000532600 DYNC1H1Q14204 4646 aaKnown RBP13.28□□□□□ -0.28
SSH3-209ENST00000532600 TRAV8-1A0A0A6YYK1 113 aa13.28□□□□□ -0.28
SSH3-209ENST00000532600 RBAKDNA6NC62 111 aa13.28□□□□□ -0.28
SSH3-209ENST00000532600 UBE2DNLQ8IWF7 75 aa13.28□□□□□ -0.28
SSH3-209ENST00000532600 CCDC28AQ8IWP9 274 aa13.28□□□□□ -0.28
SSH3-209ENST00000532600 C5orf17Q8NAS9 161 aa13.28□□□□□ -0.28
SSH3-209ENST00000532600 LINC00477Q96M19 166 aa13.28□□□□□ -0.28
SSH3-209ENST00000532600 NOP10Q9NPE3 64 aaKnown RBP13.28□□□□□ -0.28
SSH3-209ENST00000532600 EPDR1Q9UM22 224 aa13.28□□□□□ -0.28
SSH3-209ENST00000532600 DNAH11Q96DT5 4516 aa13.27□□□□□ -0.28
SSH3-209ENST00000532600 H7BYZ3 331 aa13.27□□□□□ -0.29
SSH3-209ENST00000532600 PAGE4O60829 102 aa13.27□□□□□ -0.29
SSH3-209ENST00000532600 TCRAP04437 139 aa13.27□□□□□ -0.29
SSH3-209ENST00000532600 ATP5G3P48201 142 aa13.27□□□□□ -0.29
SSH3-209ENST00000532600 PRR9Q5T870 116 aa13.27□□□□□ -0.29
SSH3-209ENST00000532600 ARL6IP6Q8N6S5 226 aa13.27□□□□□ -0.29
SSH3-209ENST00000532600 LINC00612Q8N6U2 182 aa13.27□□□□□ -0.29
SSH3-209ENST00000532600 TMEM263Q8WUH6 116 aaKnown RBP13.27□□□□□ -0.29
SSH3-209ENST00000532600 C20orf144Q9BQM9 153 aa13.27□□□□□ -0.29
SSH3-209ENST00000532600 ZNF492Q9P255 531 aa13.27□□□□□ -0.29
SSH3-209ENST00000532600 TIMM8BQ9Y5J9 83 aaPredicted RBP13.27□□□□□ -0.29
SSH3-209ENST00000532600 CBY3A6NI87 242 aa13.26□□□□□ -0.29
SSH3-209ENST00000532600 F5H768 121 aa13.26□□□□□ -0.29
SSH3-209ENST00000532600 J3KRW8 73 aa13.26□□□□□ -0.29
SSH3-209ENST00000532600 ZNF138P52744 262 aa13.26□□□□□ -0.29
SSH3-209ENST00000532600 ZNF493Q6ZR52 646 aa13.26□□□□□ -0.29
SSH3-209ENST00000532600 ZFAND2AQ8N6M9 145 aa13.26□□□□□ -0.29
SSH3-209ENST00000532600 TVP23CQ96ET8 276 aa13.26□□□□□ -0.29
SSH3-209ENST00000532600 SGK494Q96LW2 274 aa13.26□□□□□ -0.29
SSH3-209ENST00000532600 KLLNB2CW77 178 aa13.25□□□□□ -0.29
SSH3-209ENST00000532600 IGLV2-11P01706 119 aa13.25□□□□□ -0.29
SSH3-209ENST00000532600 ATP5G1P05496 136 aa13.25□□□□□ -0.29
SSH3-209ENST00000532600 CRISP2P16562 243 aa13.25□□□□□ -0.29
SSH3-209ENST00000532600 LEPP41159 167 aa13.25□□□□□ -0.29
SSH3-209ENST00000532600 TMEM78Q5T7P6 136 aa13.25□□□□□ -0.29
SSH3-209ENST00000532600 Q6ZQT7 251 aa13.25□□□□□ -0.29
SSH3-209ENST00000532600 C15orf53Q8NAA6 179 aa13.25□□□□□ -0.29
SSH3-209ENST00000532600 LINC00479Q96M42 142 aa13.25□□□□□ -0.29
SSH3-209ENST00000532600 ARL2-SNX15V9GYD0 113 aa13.25□□□□□ -0.29
SSH3-209ENST00000532600 TRAV12-3A0A0B4J271 114 aa13.24□□□□□ -0.29
SSH3-209ENST00000532600 PRSS29PA6NIE9 313 aa13.24□□□□□ -0.29
SSH3-209ENST00000532600 BTN1A1Q13410 526 aa13.24□□□□□ -0.29
SSH3-209ENST00000532600 CST9LP1Q5W188 147 aa13.24□□□□□ -0.29
SSH3-209ENST00000532600 KRTAP17-1Q9BYP8 105 aa13.24□□□□□ -0.29
SSH3-209ENST00000532600 GNG13Q9P2W3 67 aa13.24□□□□□ -0.29
SSH3-209ENST00000532600 PEX7O00628 323 aa13.23□□□□□ -0.29
SSH3-209ENST00000532600 CYB561D1Q8N8Q1 229 aa13.23□□□□□ -0.29
SSH3-209ENST00000532600 ATG101Q9BSB4 218 aa13.23□□□□□ -0.29
SSH3-209ENST00000532600 TRAV34A0A0B4J273 112 aa13.22□□□□□ -0.29
SSH3-209ENST00000532600 IFNA7P01567 189 aa13.22□□□□□ -0.29
SSH3-209ENST00000532600 TEX261Q6UWH6 196 aa13.22□□□□□ -0.29
SSH3-209ENST00000532600 NKX6-2Q9C056 277 aaPredicted RBP13.22□□□□□ -0.29
SSH3-209ENST00000532600 SERTM2A0A1B0GWG4 89 aa13.21□□□□□ -0.29
SSH3-209ENST00000532600 NUDT3O95989 172 aa13.21□□□□□ -0.29
SSH3-209ENST00000532600 HOXA5P20719 270 aa13.21□□□□□ -0.29
SSH3-209ENST00000532600 RNASE4P34096 147 aaKnown RBP13.21□□□□□ -0.29
SSH3-209ENST00000532600 ZNRF2Q8NHG8 242 aa13.21□□□□□ -0.29
SSH3-209ENST00000532600 LYPD6BQ8NI32 183 aa13.21□□□□□ -0.29
SSH3-209ENST00000532600 PSG8Q9UQ74 426 aa13.21□□□□□ -0.29
SSH3-209ENST00000532600 TRBV7-9A0A0J9YWB2 115 aa13.2□□□□□ -0.3
SSH3-209ENST00000532600 C7orf71A4D174 169 aa13.2□□□□□ -0.3
SSH3-209ENST00000532600 ZNF324O75467 553 aaPredicted RBP13.2□□□□□ -0.3
SSH3-209ENST00000532600 NMBP08949 121 aa13.2□□□□□ -0.3
SSH3-209ENST00000532600 PPT1P50897 306 aa13.2□□□□□ -0.3
SSH3-209ENST00000532600 TMEM75Q8N9X5 138 aa13.2□□□□□ -0.3
SSH3-209ENST00000532600 C11orf72Q8NBR9 251 aa13.2□□□□□ -0.3
SSH3-209ENST00000532600 ZNF680Q8NEM1 530 aa13.2□□□□□ -0.3
SSH3-209ENST00000532600 PCNPQ8WW12 178 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms