RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 LINC01545Q5VT33 79 aa1.77□□□□□ -2.13
USP47-211ENST00000531513 ZNF833PQ6ZTB9 187 aa1.77□□□□□ -2.13
USP47-211ENST00000531513 TCTEX1D1Q8N7M0 179 aa1.77□□□□□ -2.13
USP47-211ENST00000531513 C15orf53Q8NAA6 179 aa1.77□□□□□ -2.13
USP47-211ENST00000531513 PSMF1Q92530 271 aa1.77□□□□□ -2.13
USP47-211ENST00000531513 PDCD10Q9BUL8 212 aa1.77□□□□□ -2.13
USP47-211ENST00000531513 FKBP11Q9NYL4 201 aa1.77□□□□□ -2.13
USP47-211ENST00000531513 FER1L6Q2WGJ9 1857 aa1.77□□□□□ -2.13
USP47-211ENST00000531513 UHRF1BP1LA0JNW5 1464 aa1.76□□□□□ -2.13
USP47-211ENST00000531513 ARHGAP31Q2M1Z3 1444 aa1.76□□□□□ -2.13
USP47-211ENST00000531513 COL11A1P12107 1806 aaPredicted RBP1.76□□□□□ -2.13
USP47-211ENST00000531513 IGHV1-24A0A0C4DH33 117 aa1.76□□□□□ -2.13
USP47-211ENST00000531513 A0A0G2JMM0 328 aa1.76□□□□□ -2.13
USP47-211ENST00000531513 A0A1W2PPB8 328 aa1.76□□□□□ -2.13
USP47-211ENST00000531513 KIR3DP1A8MWS1 328 aa1.76□□□□□ -2.13
USP47-211ENST00000531513 ZNF736B4DX44 427 aaPredicted RBP1.76□□□□□ -2.13
USP47-211ENST00000531513 J3QKU1 62 aa1.76□□□□□ -2.13
USP47-211ENST00000531513 CD3DP04234 171 aa1.76□□□□□ -2.13
USP47-211ENST00000531513 ZNF25P17030 456 aaPredicted RBP1.76□□□□□ -2.13
USP47-211ENST00000531513 CLLU1Q5K131 121 aa1.76□□□□□ -2.13
USP47-211ENST00000531513 OTOSQ8NHW6 89 aa1.76□□□□□ -2.13
USP47-211ENST00000531513 CIB3Q96Q77 187 aaPredicted RBP1.76□□□□□ -2.13
USP47-211ENST00000531513 SDF2Q99470 211 aa1.76□□□□□ -2.13
USP47-211ENST00000531513 SMIM7Q9BQ49 75 aa1.76□□□□□ -2.13
USP47-211ENST00000531513 SPANXDQ9BXN6 97 aa1.76□□□□□ -2.13
USP47-211ENST00000531513 PCNX2A6NKB5 2137 aa1.76□□□□□ -2.13
USP47-211ENST00000531513 FBN1P35555 2871 aaKnown RBP1.76□□□□□ -2.13
USP47-211ENST00000531513 MYH10P35580 1976 aa1.76□□□□□ -2.13
USP47-211ENST00000531513 BCL9LQ86UU0 1499 aa1.75□□□□□ -2.13
USP47-211ENST00000531513 RTTNQ86VV8 2226 aa1.75□□□□□ -2.13
USP47-211ENST00000531513 C3orf85A0A1B0GTC6 90 aa1.75□□□□□ -2.13
USP47-211ENST00000531513 F6UZH7 168 aa1.75□□□□□ -2.13
USP47-211ENST00000531513 M0R2P5 195 aa1.75□□□□□ -2.13
USP47-211ENST00000531513 CD2P06729 351 aa1.75□□□□□ -2.13
USP47-211ENST00000531513 CD14P08571 375 aa1.75□□□□□ -2.13
USP47-211ENST00000531513 CXCL8P10145 99 aa1.75□□□□□ -2.13
USP47-211ENST00000531513 CNBPP62633 177 aaKnown RBP1.75□□□□□ -2.13
USP47-211ENST00000531513 BTG2P78543 158 aa1.75□□□□□ -2.13
USP47-211ENST00000531513 OCIAD2Q56VL3 154 aa1.75□□□□□ -2.13
USP47-211ENST00000531513 CASC2Q6XLA1 102 aa1.75□□□□□ -2.13
USP47-211ENST00000531513 ATP11AUNQ6ZP68 121 aa1.75□□□□□ -2.13
USP47-211ENST00000531513 IDO2Q6ZQW0 420 aa1.75□□□□□ -2.13
USP47-211ENST00000531513 LINC00269Q8N2A0 174 aa1.75□□□□□ -2.13
USP47-211ENST00000531513 KCNRGQ8N5I3 272 aa1.75□□□□□ -2.13
USP47-211ENST00000531513 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.75□□□□□ -2.13
USP47-211ENST00000531513 OR10AG1Q8NH19 301 aa1.75□□□□□ -2.13
USP47-211ENST00000531513 Q8TAT8 98 aa1.75□□□□□ -2.13
USP47-211ENST00000531513 C12orf57Q99622 126 aa1.75□□□□□ -2.13
USP47-211ENST00000531513 PSMG3Q9BT73 122 aaPredicted RBP1.75□□□□□ -2.13
USP47-211ENST00000531513 SNRNP25Q9BV90 132 aaKnown RBP1.75□□□□□ -2.13
USP47-211ENST00000531513 KLK9Q9UKQ9 250 aa1.75□□□□□ -2.13
USP47-211ENST00000531513 DOCK10Q96BY6 2186 aa1.75□□□□□ -2.13
USP47-211ENST00000531513 MYOM3Q5VTT5 1437 aa1.74□□□□□ -2.13
USP47-211ENST00000531513 COL4A1P02462 1669 aa1.74□□□□□ -2.13
USP47-211ENST00000531513 MYLKQ15746 1914 aa1.74□□□□□ -2.13
USP47-211ENST00000531513 SYNJ1O43426 1573 aa1.74□□□□□ -2.13
USP47-211ENST00000531513 ATP6V1G2-DDX39BF2Z307 99 aa1.74□□□□□ -2.13
USP47-211ENST00000531513 HCRTO43612 131 aa1.74□□□□□ -2.13
USP47-211ENST00000531513 KRTAP26-1Q6PEX3 210 aa1.74□□□□□ -2.13
USP47-211ENST00000531513 TEX261Q6UWH6 196 aa1.74□□□□□ -2.13
USP47-211ENST00000531513 ATP6V0E2Q8NHE4 81 aa1.74□□□□□ -2.13
USP47-211ENST00000531513 PATE1Q8WXA2 126 aa1.74□□□□□ -2.13
USP47-211ENST00000531513 CYSTM1Q9H1C7 97 aa1.74□□□□□ -2.13
USP47-211ENST00000531513 TRAV12-2A0A075B6T6 113 aa1.73□□□□□ -2.13
USP47-211ENST00000531513 TRAV2A0A0B4J234 112 aa1.73□□□□□ -2.13
USP47-211ENST00000531513 C5orf67F2Z3F1 127 aa1.73□□□□□ -2.13
USP47-211ENST00000531513 CORTO00230 105 aa1.73□□□□□ -2.13
USP47-211ENST00000531513 AKAIN1P0CW23 69 aa1.73□□□□□ -2.13
USP47-211ENST00000531513 UNQ6190/PRO20217Q6UXQ8 127 aa1.73□□□□□ -2.13
USP47-211ENST00000531513 PP6455Q8WZ26 134 aa1.73□□□□□ -2.13
USP47-211ENST00000531513 DPH3Q96FX2 82 aa1.73□□□□□ -2.13
USP47-211ENST00000531513 LSM2Q9Y333 95 aaKnown RBP1.73□□□□□ -2.13
USP47-211ENST00000531513 COL24A1Q17RW2 1714 aa1.73□□□□□ -2.13
USP47-211ENST00000531513 BAZ2BQ9UIF8 2168 aaKnown RBP1.73□□□□□ -2.13
USP47-211ENST00000531513 FGD6Q6ZV73 1430 aa1.73□□□□□ -2.13
USP47-211ENST00000531513 RP1P56715 2156 aa1.72□□□□□ -2.13
USP47-211ENST00000531513 LOC107984156A0A0G2JMH3 177 aa1.72□□□□□ -2.13
USP47-211ENST00000531513 C20orf202A1L168 122 aa1.72□□□□□ -2.13
USP47-211ENST00000531513 C9orf170A2RU37 121 aa1.72□□□□□ -2.13
USP47-211ENST00000531513 EDF1O60869 148 aaKnown RBP1.72□□□□□ -2.13
USP47-211ENST00000531513 MEIG1Q5JSS6 88 aa1.72□□□□□ -2.13
USP47-211ENST00000531513 FOXI2Q6ZQN5 318 aa1.72□□□□□ -2.13
USP47-211ENST00000531513 GKN2Q86XP6 184 aa1.72□□□□□ -2.13
USP47-211ENST00000531513 ARL17AQ8IVW1 177 aa1.72□□□□□ -2.13
USP47-211ENST00000531513 LINC00052Q96N35 136 aa1.72□□□□□ -2.13
USP47-211ENST00000531513 TAS2R8Q9NYW2 309 aa1.72□□□□□ -2.13
USP47-211ENST00000531513 NOP16Q9Y3C1 178 aaKnown RBP1.72□□□□□ -2.13
USP47-211ENST00000531513 LAMB4A4D0S4 1761 aa1.72□□□□□ -2.13
USP47-211ENST00000531513 NALCNQ8IZF0 1738 aa1.71□□□□□ -2.13
USP47-211ENST00000531513 HEATR5BQ9P2D3 2071 aa1.71□□□□□ -2.13
USP47-211ENST00000531513 A6NN06 94 aa1.71□□□□□ -2.14
USP47-211ENST00000531513 J3QLW9 94 aa1.71□□□□□ -2.14
USP47-211ENST00000531513 CCL16O15467 120 aa1.71□□□□□ -2.14
USP47-211ENST00000531513 SMIM6P0DI80 62 aa1.71□□□□□ -2.14
USP47-211ENST00000531513 COX7CP15954 63 aa1.71□□□□□ -2.14
USP47-211ENST00000531513 HIST1H1DP16402 221 aaKnown RBP1.71□□□□□ -2.14
USP47-211ENST00000531513 GNG4P50150 75 aa1.71□□□□□ -2.14
USP47-211ENST00000531513 MIR22HGQ0VDD5 57 aa1.71□□□□□ -2.14
USP47-211ENST00000531513 FAM74A1Q5RGS3 127 aa1.71□□□□□ -2.14
USP47-211ENST00000531513 Q6ZUT4 128 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms