RNA–Protein interactions for RNA: ENST00000531504.5

HIPK3-205, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 2

Gene HIPK3, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-205ENST00000531504 OR51M1Q9H341 326 aa13.72□□□□□ -0.21
HIPK3-205ENST00000531504 ZNF586Q9NXT0 402 aa13.72□□□□□ -0.21
HIPK3-205ENST00000531504 SRRM2Q9UQ35 2752 aaKnown RBP13.71□□□□□ -0.21
HIPK3-205ENST00000531504 TRAV1-1A0A0B4J248 108 aa13.71□□□□□ -0.21
HIPK3-205ENST00000531504 TEX46H3BTG2 121 aa13.71□□□□□ -0.21
HIPK3-205ENST00000531504 M0R2Z0 102 aa13.71□□□□□ -0.21
HIPK3-205ENST00000531504 MRPS12O15235 138 aaKnown RBP13.71□□□□□ -0.21
HIPK3-205ENST00000531504 ARL14EPLP0DKL9 152 aa13.71□□□□□ -0.21
HIPK3-205ENST00000531504 GALR1P47211 349 aa13.71□□□□□ -0.21
HIPK3-205ENST00000531504 J3QL48 77 aa13.7□□□□□ -0.22
HIPK3-205ENST00000531504 CRXO43186 299 aaPredicted RBP13.7□□□□□ -0.22
HIPK3-205ENST00000531504 CNN1P51911 297 aaKnown RBP13.7□□□□□ -0.22
HIPK3-205ENST00000531504 FGF8P55075 233 aaPredicted RBP13.7□□□□□ -0.22
HIPK3-205ENST00000531504 LINC00315P59091 139 aa13.7□□□□□ -0.22
HIPK3-205ENST00000531504 ERVFC1-1P60608 527 aa13.7□□□□□ -0.22
HIPK3-205ENST00000531504 RAB14P61106 215 aa13.7□□□□□ -0.22
HIPK3-205ENST00000531504 TMEM256Q8N2U0 113 aa13.7□□□□□ -0.22
HIPK3-205ENST00000531504 OR10J6PQ8NGY7 276 aa13.7□□□□□ -0.22
HIPK3-205ENST00000531504 C16orf74Q96GX8 76 aa13.7□□□□□ -0.22
HIPK3-205ENST00000531504 C20orf173Q96LM9 149 aa13.7□□□□□ -0.22
HIPK3-205ENST00000531504 MRPS16Q9Y3D3 137 aaKnown RBP13.7□□□□□ -0.22
HIPK3-205ENST00000531504 TIMM8BQ9Y5J9 83 aaPredicted RBP13.7□□□□□ -0.22
HIPK3-205ENST00000531504 TRAV26-1A0A087WT03 109 aa13.69□□□□□ -0.22
HIPK3-205ENST00000531504 NMBP08949 121 aa13.69□□□□□ -0.22
HIPK3-205ENST00000531504 PYYP10082 97 aa13.69□□□□□ -0.22
HIPK3-205ENST00000531504 HIST1H1EP10412 219 aaKnown RBP13.69□□□□□ -0.22
HIPK3-205ENST00000531504 AZU1P20160 251 aa13.69□□□□□ -0.22
HIPK3-205ENST00000531504 GCHFRP30047 84 aa13.69□□□□□ -0.22
HIPK3-205ENST00000531504 UBE2L3P68036 154 aaKnown RBP13.69□□□□□ -0.22
HIPK3-205ENST00000531504 OR5I1Q13606 314 aa13.69□□□□□ -0.22
HIPK3-205ENST00000531504 RXFP4Q8TDU9 374 aa13.69□□□□□ -0.22
HIPK3-205ENST00000531504 FXYD5Q96DB9 178 aa13.69□□□□□ -0.22
HIPK3-205ENST00000531504 FAT1Q14517 4588 aa13.68□□□□□ -0.22
HIPK3-205ENST00000531504 A0A087X0K7 114 aa13.68□□□□□ -0.22
HIPK3-205ENST00000531504 A0A1B0GV50 99 aa13.68□□□□□ -0.22
HIPK3-205ENST00000531504 OR10J4P0C629 311 aa13.68□□□□□ -0.22
HIPK3-205ENST00000531504 IGLC2P0DOY2 106 aa13.68□□□□□ -0.22
HIPK3-205ENST00000531504 IQCF2Q8IXL9 164 aa13.68□□□□□ -0.22
HIPK3-205ENST00000531504 LYPD6BQ8NI32 183 aa13.68□□□□□ -0.22
HIPK3-205ENST00000531504 PCNPQ8WW12 178 aaKnown RBP13.68□□□□□ -0.22
HIPK3-205ENST00000531504 LINC01587Q99440 93 aa13.68□□□□□ -0.22
HIPK3-205ENST00000531504 TMEM167BQ9NRX6 74 aa13.68□□□□□ -0.22
HIPK3-205ENST00000531504 FAM229AH3BQW9 127 aa13.67□□□□□ -0.22
HIPK3-205ENST00000531504 TAS2R60P59551 318 aa13.67□□□□□ -0.22
HIPK3-205ENST00000531504 GUK1Q16774 197 aa13.67□□□□□ -0.22
HIPK3-205ENST00000531504 ESRGQ1W209 222 aa13.67□□□□□ -0.22
HIPK3-205ENST00000531504 CLLU1Q5K131 121 aa13.67□□□□□ -0.22
HIPK3-205ENST00000531504 Q6ZRN7 208 aaPredicted RBP13.67□□□□□ -0.22
HIPK3-205ENST00000531504 SUN5Q8TC36 379 aa13.67□□□□□ -0.22
HIPK3-205ENST00000531504 TMPRSS5Q9H3S3 457 aa13.67□□□□□ -0.22
HIPK3-205ENST00000531504 H3BQ15 152 aa13.66□□□□□ -0.22
HIPK3-205ENST00000531504 NBEAP1P0C6P0 100 aa13.66□□□□□ -0.22
HIPK3-205ENST00000531504 ZNF493Q6ZR52 646 aa13.66□□□□□ -0.22
HIPK3-205ENST00000531504 C17orf77Q96MU5 243 aa13.66□□□□□ -0.22
HIPK3-205ENST00000531504 H3BNG1 76 aa13.65□□□□□ -0.22
HIPK3-205ENST00000531504 PPT1P50897 306 aa13.65□□□□□ -0.22
HIPK3-205ENST00000531504 CCL20P78556 96 aa13.65□□□□□ -0.22
HIPK3-205ENST00000531504 ICAM4Q14773 271 aa13.65□□□□□ -0.22
HIPK3-205ENST00000531504 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.65□□□□□ -0.22
HIPK3-205ENST00000531504 Q6ZSN1 163 aa13.65□□□□□ -0.22
HIPK3-205ENST00000531504 VPS13BQ7Z7G8 4022 aa13.65□□□□□ -0.22
HIPK3-205ENST00000531504 TRBV19A0A075B6N1 114 aa13.64□□□□□ -0.23
HIPK3-205ENST00000531504 TRAV12-2A0A075B6T6 113 aa13.64□□□□□ -0.23
HIPK3-205ENST00000531504 A0A0J9YY99 117 aa13.64□□□□□ -0.23
HIPK3-205ENST00000531504 SNRPCP09234 159 aaKnown RBP13.64□□□□□ -0.23
HIPK3-205ENST00000531504 HTN1P15515 57 aa13.64□□□□□ -0.23
HIPK3-205ENST00000531504 FUSP35637 526 aaKnown RBP eCLIP13.64□□□□□ -0.23
HIPK3-205ENST00000531504 PDE6HQ13956 83 aa13.64□□□□□ -0.23
HIPK3-205ENST00000531504 BLNKQ8WV28 456 aa13.64□□□□□ -0.23
HIPK3-205ENST00000531504 NOP10Q9NPE3 64 aaKnown RBP13.64□□□□□ -0.23
HIPK3-205ENST00000531504 MDFICQ9P1T7 246 aa13.64□□□□□ -0.23
HIPK3-205ENST00000531504 H3BTX0 84 aa13.63□□□□□ -0.23
HIPK3-205ENST00000531504 ZNF253O75346 499 aa13.63□□□□□ -0.23
HIPK3-205ENST00000531504 SMR3BP02814 79 aaPredicted RBP13.63□□□□□ -0.23
HIPK3-205ENST00000531504 TMEM263Q8WUH6 116 aaKnown RBP13.63□□□□□ -0.23
HIPK3-205ENST00000531504 PPP1R14DQ9NXH3 145 aa13.63□□□□□ -0.23
HIPK3-205ENST00000531504 IFNA1P01562 189 aa13.62□□□□□ -0.23
HIPK3-205ENST00000531504 SLC50A1Q9BRV3 221 aa13.62□□□□□ -0.23
HIPK3-205ENST00000531504 A0A1W2PRE2 83 aa13.61□□□□□ -0.23
HIPK3-205ENST00000531504 NDUFB4O95168 129 aa13.61□□□□□ -0.23
HIPK3-205ENST00000531504 KRTAP10-1P60331 282 aa13.61□□□□□ -0.23
HIPK3-205ENST00000531504 RNASE8Q8TDE3 154 aaKnown RBP13.61□□□□□ -0.23
HIPK3-205ENST00000531504 MANBALQ9NQG1 85 aa13.61□□□□□ -0.23
HIPK3-205ENST00000531504 GNG13Q9P2W3 67 aa13.61□□□□□ -0.23
HIPK3-205ENST00000531504 ARL2-SNX15V9GYD0 113 aa13.61□□□□□ -0.23
HIPK3-205ENST00000531504 SLC17A3O00476 420 aa13.6□□□□□ -0.23
HIPK3-205ENST00000531504 SIVA1O15304 175 aa13.6□□□□□ -0.23
HIPK3-205ENST00000531504 ZNF738Q8NE65 137 aa13.6□□□□□ -0.23
HIPK3-205ENST00000531504 ZNF331Q9NQX6 463 aaPredicted RBP13.6□□□□□ -0.23
HIPK3-205ENST00000531504 PAGE4O60829 102 aa13.59□□□□□ -0.23
HIPK3-205ENST00000531504 UBE2G2P60604 165 aa13.59□□□□□ -0.23
HIPK3-205ENST00000531504 RANP62826 216 aaKnown RBP13.59□□□□□ -0.23
HIPK3-205ENST00000531504 NFE4Q86UQ8 179 aa13.59□□□□□ -0.23
HIPK3-205ENST00000531504 RNF182Q8N6D2 247 aa13.59□□□□□ -0.23
HIPK3-205ENST00000531504 LINC00612Q8N6U2 182 aa13.59□□□□□ -0.23
HIPK3-205ENST00000531504 TRAV8-2A0A0B4J237 113 aa13.58□□□□□ -0.24
HIPK3-205ENST00000531504 FAM74A7A6NL05 159 aa13.58□□□□□ -0.24
HIPK3-205ENST00000531504 HOXA5P20719 270 aa13.58□□□□□ -0.24
HIPK3-205ENST00000531504 TAGLN2P37802 199 aaKnown RBP13.58□□□□□ -0.24
HIPK3-205ENST00000531504 HIST1H1AQ02539 215 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms