RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 OR10G7Q8NGN6 311 aa15.46■□□□□ 0.07
TRAPPC4-210ENST00000531290 FXYD5Q96DB9 178 aa15.46■□□□□ 0.07
TRAPPC4-210ENST00000531290 NACAE9PAV3 2078 aa15.45■□□□□ 0.06
TRAPPC4-210ENST00000531290 C11orf72Q8NBR9 251 aa15.45■□□□□ 0.06
TRAPPC4-210ENST00000531290 VGLL1Q99990 258 aa15.45■□□□□ 0.06
TRAPPC4-210ENST00000531290 TNFSF18Q9UNG2 199 aa15.45■□□□□ 0.06
TRAPPC4-210ENST00000531290 C16orf90A8MZG2 172 aa15.44■□□□□ 0.06
TRAPPC4-210ENST00000531290 RGS13O14921 159 aa15.44■□□□□ 0.06
TRAPPC4-210ENST00000531290 MBP02144 154 aa15.44■□□□□ 0.06
TRAPPC4-210ENST00000531290 RANP62826 216 aaKnown RBP15.44■□□□□ 0.06
TRAPPC4-210ENST00000531290 SERF2P84101 59 aa15.44■□□□□ 0.06
TRAPPC4-210ENST00000531290 LYPD1Q8N2G4 141 aa15.44■□□□□ 0.06
TRAPPC4-210ENST00000531290 C18orf15Q96N68 181 aa15.44■□□□□ 0.06
TRAPPC4-210ENST00000531290 PSMG3Q9BT73 122 aaPredicted RBP15.44■□□□□ 0.06
TRAPPC4-210ENST00000531290 RAB2AP61019 212 aa15.43■□□□□ 0.06
TRAPPC4-210ENST00000531290 PQLC2Q6ZP29 291 aa15.43■□□□□ 0.06
TRAPPC4-210ENST00000531290 OR2G3Q8NGZ4 309 aa15.43■□□□□ 0.06
TRAPPC4-210ENST00000531290 UPK3BQ9BT76 320 aa15.43■□□□□ 0.06
TRAPPC4-210ENST00000531290 ZNF492Q9P255 531 aa15.43■□□□□ 0.06
TRAPPC4-210ENST00000531290 MRPS16Q9Y3D3 137 aaKnown RBP15.43■□□□□ 0.06
TRAPPC4-210ENST00000531290 KLF12Q9Y4X4 402 aa15.43■□□□□ 0.06
TRAPPC4-210ENST00000531290 ATP6V0CP27449 155 aa15.42■□□□□ 0.06
TRAPPC4-210ENST00000531290 ZNF138P52744 262 aa15.42■□□□□ 0.06
TRAPPC4-210ENST00000531290 TCL1AP56279 114 aa15.42■□□□□ 0.06
TRAPPC4-210ENST00000531290 FAM74A1Q5RGS3 127 aa15.42■□□□□ 0.06
TRAPPC4-210ENST00000531290 ZFAND2AQ8N6M9 145 aa15.42■□□□□ 0.06
TRAPPC4-210ENST00000531290 Q9H3A6 140 aa15.42■□□□□ 0.06
TRAPPC4-210ENST00000531290 RYR1P21817 5038 aa15.42■□□□□ 0.06
TRAPPC4-210ENST00000531290 IGHV1OR15-1A0A075B7D0 117 aa15.41■□□□□ 0.06
TRAPPC4-210ENST00000531290 RNF222A6NCQ9 220 aa15.41■□□□□ 0.06
TRAPPC4-210ENST00000531290 ARPC5O15511 151 aa15.41■□□□□ 0.06
TRAPPC4-210ENST00000531290 SPINK4O60575 86 aa15.41■□□□□ 0.06
TRAPPC4-210ENST00000531290 IBA57Q5T440 356 aaKnown RBP15.41■□□□□ 0.06
TRAPPC4-210ENST00000531290 PHYHIPLQ96FC7 376 aa15.41■□□□□ 0.06
TRAPPC4-210ENST00000531290 VSIG2Q96IQ7 327 aa15.41■□□□□ 0.06
TRAPPC4-210ENST00000531290 ARPC5LQ9BPX5 153 aa15.41■□□□□ 0.06
TRAPPC4-210ENST00000531290 TAAR5O14804 337 aa15.4■□□□□ 0.06
TRAPPC4-210ENST00000531290 CDC34P49427 236 aaPredicted RBP15.4■□□□□ 0.06
TRAPPC4-210ENST00000531290 TP53TG3Q9ULZ0 132 aa15.4■□□□□ 0.06
TRAPPC4-210ENST00000531290 A0A096LPF7 62 aa15.39■□□□□ 0.05
TRAPPC4-210ENST00000531290 TRBV7-9A0A0J9YWB2 115 aa15.39■□□□□ 0.05
TRAPPC4-210ENST00000531290 A0A1W2PPQ1 181 aa15.39■□□□□ 0.05
TRAPPC4-210ENST00000531290 PRR9Q5T870 116 aa15.39■□□□□ 0.05
TRAPPC4-210ENST00000531290 RPL7L1Q6DKI1 246 aaKnown RBP15.39■□□□□ 0.05
TRAPPC4-210ENST00000531290 CMTM2Q8TAZ6 248 aa15.39■□□□□ 0.05
TRAPPC4-210ENST00000531290 PAX4O43316 350 aa15.38■□□□□ 0.05
TRAPPC4-210ENST00000531290 Q8TAT8 98 aa15.38■□□□□ 0.05
TRAPPC4-210ENST00000531290 ST6GAL2Q96JF0 529 aa15.38■□□□□ 0.05
TRAPPC4-210ENST00000531290 HYLS1Q96M11 299 aa15.38■□□□□ 0.05
TRAPPC4-210ENST00000531290 KRTAP1-5Q9BYS1 174 aa15.38■□□□□ 0.05
TRAPPC4-210ENST00000531290 ACTR3CQ9C0K3 210 aaPredicted RBP15.38■□□□□ 0.05
TRAPPC4-210ENST00000531290 HMGB3O15347 200 aaKnown RBP15.37■□□□□ 0.05
TRAPPC4-210ENST00000531290 EIF3GO75821 320 aaKnown RBP eCLIP15.37■□□□□ 0.05
TRAPPC4-210ENST00000531290 IGHV3-53P01767 116 aa15.37■□□□□ 0.05
TRAPPC4-210ENST00000531290 Q6ZQT7 251 aa15.37■□□□□ 0.05
TRAPPC4-210ENST00000531290 SH3BGRL3Q9H299 93 aa15.37■□□□□ 0.05
TRAPPC4-210ENST00000531290 OTORQ9NRC9 128 aa15.37■□□□□ 0.05
TRAPPC4-210ENST00000531290 MRPL16Q9NX20 251 aaKnown RBP15.37■□□□□ 0.05
TRAPPC4-210ENST00000531290 LRP1BQ9NZR2 4599 aa15.37■□□□□ 0.05
TRAPPC4-210ENST00000531290 RBAKDNA6NC62 111 aa15.36■□□□□ 0.05
TRAPPC4-210ENST00000531290 PGPA6NDG6 321 aa15.36■□□□□ 0.05
TRAPPC4-210ENST00000531290 BTF3P20290 206 aaKnown RBP15.36■□□□□ 0.05
TRAPPC4-210ENST00000531290 ZNF415Q09FC8 603 aa15.36■□□□□ 0.05
TRAPPC4-210ENST00000531290 SLAQ13239 276 aa15.36■□□□□ 0.05
TRAPPC4-210ENST00000531290 RAB24Q969Q5 203 aa15.36■□□□□ 0.05
TRAPPC4-210ENST00000531290 ICOSQ9Y6W8 199 aa15.36■□□□□ 0.05
TRAPPC4-210ENST00000531290 SMLR1H3BR10 107 aa15.35■□□□□ 0.05
TRAPPC4-210ENST00000531290 ARL14EPLP0DKL9 152 aa15.35■□□□□ 0.05
TRAPPC4-210ENST00000531290 PRO0255Q9UI72 69 aa15.35■□□□□ 0.05
TRAPPC4-210ENST00000531290 HSPG2P98160 4391 aa15.34■□□□□ 0.05
TRAPPC4-210ENST00000531290 G3V3Q6 166 aa15.34■□□□□ 0.05
TRAPPC4-210ENST00000531290 CXorf1O96002 111 aa15.34■□□□□ 0.05
TRAPPC4-210ENST00000531290 STAG3L2P0CL84 134 aa15.34■□□□□ 0.05
TRAPPC4-210ENST00000531290 STAG3L3P0CL85 134 aa15.34■□□□□ 0.05
TRAPPC4-210ENST00000531290 MUC21Q5SSG8 566 aa15.34■□□□□ 0.05
TRAPPC4-210ENST00000531290 SPATA12Q7Z6I5 190 aa15.34■□□□□ 0.05
TRAPPC4-210ENST00000531290 HHLA3Q9XRX5 114 aa15.34■□□□□ 0.05
TRAPPC4-210ENST00000531290 CDK2AP2O75956 126 aa15.33■□□□□ 0.04
TRAPPC4-210ENST00000531290 AKR1C8PQ5T2L2 129 aa15.33■□□□□ 0.04
TRAPPC4-210ENST00000531290 TMEM167BQ9NRX6 74 aa15.33■□□□□ 0.04
TRAPPC4-210ENST00000531290 RPH3ALQ9UNE2 315 aa15.33■□□□□ 0.04
TRAPPC4-210ENST00000531290 DIRC3C9JPN6 131 aa15.32■□□□□ 0.04
TRAPPC4-210ENST00000531290 SIVA1O15304 175 aa15.32■□□□□ 0.04
TRAPPC4-210ENST00000531290 IQCF2Q8IXL9 164 aa15.32■□□□□ 0.04
TRAPPC4-210ENST00000531290 ARL6IP6Q8N6S5 226 aa15.32■□□□□ 0.04
TRAPPC4-210ENST00000531290 LENEPQ9Y5L5 61 aa15.32■□□□□ 0.04
TRAPPC4-210ENST00000531290 A0A0D9SG52 128 aa15.31■□□□□ 0.04
TRAPPC4-210ENST00000531290 HMSDA8MTL9 139 aa15.31■□□□□ 0.04
TRAPPC4-210ENST00000531290 GCHFRP30047 84 aa15.31■□□□□ 0.04
TRAPPC4-210ENST00000531290 CRYBA4P53673 196 aa15.31■□□□□ 0.04
TRAPPC4-210ENST00000531290 ZNF345Q14585 488 aa15.31■□□□□ 0.04
TRAPPC4-210ENST00000531290 FAM159AQ6UWV7 190 aa15.31■□□□□ 0.04
TRAPPC4-210ENST00000531290 C8orf49Q96NF6 230 aa15.31■□□□□ 0.04
TRAPPC4-210ENST00000531290 MDFICQ9P1T7 246 aa15.31■□□□□ 0.04
TRAPPC4-210ENST00000531290 TRGV4A0A0C4DH28 118 aa15.3■□□□□ 0.04
TRAPPC4-210ENST00000531290 FHL2Q14192 279 aa15.3■□□□□ 0.04
TRAPPC4-210ENST00000531290 MRPL23Q16540 153 aaKnown RBP15.3■□□□□ 0.04
TRAPPC4-210ENST00000531290 KCNRGQ8N5I3 272 aa15.3■□□□□ 0.04
TRAPPC4-210ENST00000531290 ABCA13Q86UQ4 5058 aa15.3■□□□□ 0.04
TRAPPC4-210ENST00000531290 KANTRA0A1W2PQU2 76 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms