RNA–Protein interactions for RNA: ENST00000531043.1

HIF3A-214, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-214ENST00000531043 SPANXN2Q5MJ10 180 aa8.91□□□□□ -0.98
HIF3A-214ENST00000531043 TMEM78Q5T7P6 136 aa8.91□□□□□ -0.98
HIF3A-214ENST00000531043 Q6ZSN1 163 aa8.91□□□□□ -0.98
HIF3A-214ENST00000531043 C12orf45Q8N5I9 185 aaPredicted RBP8.91□□□□□ -0.98
HIF3A-214ENST00000531043 SEC22CQ9BRL7 303 aa8.91□□□□□ -0.98
HIF3A-214ENST00000531043 CCDC160A6NGH7 325 aa8.9□□□□□ -0.98
HIF3A-214ENST00000531043 PDE6HQ13956 83 aa8.9□□□□□ -0.98
HIF3A-214ENST00000531043 IQCF2Q8IXL9 164 aa8.9□□□□□ -0.98
HIF3A-214ENST00000531043 TMEM252Q8N6L7 170 aa8.9□□□□□ -0.98
HIF3A-214ENST00000531043 CHAC2Q8WUX2 184 aa8.9□□□□□ -0.98
HIF3A-214ENST00000531043 C20orf85Q9H1P6 137 aa8.9□□□□□ -0.98
HIF3A-214ENST00000531043 LRP1Q07954 4544 aaKnown RBP8.89□□□□□ -0.99
HIF3A-214ENST00000531043 C5orf51A6NDU8 294 aa8.89□□□□□ -0.99
HIF3A-214ENST00000531043 J3QL48 77 aa8.89□□□□□ -0.99
HIF3A-214ENST00000531043 PLA2G10O15496 165 aa8.89□□□□□ -0.99
HIF3A-214ENST00000531043 SULT1A1P50225 295 aa8.89□□□□□ -0.99
HIF3A-214ENST00000531043 ZNF138P52744 262 aa8.89□□□□□ -0.99
HIF3A-214ENST00000531043 ZNF846Q147U1 533 aa8.89□□□□□ -0.99
HIF3A-214ENST00000531043 TMEM183BQ1AE95 376 aa8.89□□□□□ -0.99
HIF3A-214ENST00000531043 TMEM183AQ8IXX5 376 aa8.89□□□□□ -0.99
HIF3A-214ENST00000531043 OR10G4Q8NGN3 311 aa8.89□□□□□ -0.99
HIF3A-214ENST00000531043 PHYHIPLQ96FC7 376 aa8.89□□□□□ -0.99
HIF3A-214ENST00000531043 TMEM70Q9BUB7 260 aa8.89□□□□□ -0.99
HIF3A-214ENST00000531043 RBM38Q9H0Z9 239 aaKnown RBP8.89□□□□□ -0.99
HIF3A-214ENST00000531043 AAMDCQ9H7C9 122 aa8.89□□□□□ -0.99
HIF3A-214ENST00000531043 OR10J4P0C629 311 aa8.88□□□□□ -0.99
HIF3A-214ENST00000531043 NBEAP1P0C6P0 100 aa8.88□□□□□ -0.99
HIF3A-214ENST00000531043 S100A11P31949 105 aa8.88□□□□□ -0.99
HIF3A-214ENST00000531043 S100A10P60903 97 aa8.88□□□□□ -0.99
HIF3A-214ENST00000531043 IL15RAQ13261 267 aa8.88□□□□□ -0.99
HIF3A-214ENST00000531043 RAB32Q13637 225 aa8.88□□□□□ -0.99
HIF3A-214ENST00000531043 ZNF266Q14584 549 aa8.88□□□□□ -0.99
HIF3A-214ENST00000531043 THAP6Q8TBB0 222 aa8.88□□□□□ -0.99
HIF3A-214ENST00000531043 PCNPQ8WW12 178 aaKnown RBP8.88□□□□□ -0.99
HIF3A-214ENST00000531043 RASL10AQ92737 203 aa8.88□□□□□ -0.99
HIF3A-214ENST00000531043 FXYD5Q96DB9 178 aa8.88□□□□□ -0.99
HIF3A-214ENST00000531043 C2orf50Q96LR7 162 aa8.88□□□□□ -0.99
HIF3A-214ENST00000531043 NPCDR1Q9BY65 106 aa8.88□□□□□ -0.99
HIF3A-214ENST00000531043 GPN1Q9HCN4 374 aaPredicted RBP8.88□□□□□ -0.99
HIF3A-214ENST00000531043 LYRM2Q9NU23 88 aaPredicted RBP8.88□□□□□ -0.99
HIF3A-214ENST00000531043 TRAV6A0A075B6T7 132 aa8.87□□□□□ -0.99
HIF3A-214ENST00000531043 IGHV3-16A0A0C4DH30 117 aa8.87□□□□□ -0.99
HIF3A-214ENST00000531043 IL7P13232 177 aa8.87□□□□□ -0.99
HIF3A-214ENST00000531043 WFDC2Q14508 124 aa8.87□□□□□ -0.99
HIF3A-214ENST00000531043 SLC25A31Q9H0C2 315 aa8.87□□□□□ -0.99
HIF3A-214ENST00000531043 CENPXA8MT69 81 aa8.86□□□□□ -0.99
HIF3A-214ENST00000531043 GNRH2O43555 120 aa8.86□□□□□ -0.99
HIF3A-214ENST00000531043 Q8N814 137 aa8.86□□□□□ -0.99
HIF3A-214ENST00000531043 PAXXQ9BUH6 204 aa8.86□□□□□ -0.99
HIF3A-214ENST00000531043 OR51M1Q9H341 326 aa8.86□□□□□ -0.99
HIF3A-214ENST00000531043 Q9HAA7 133 aa8.86□□□□□ -0.99
HIF3A-214ENST00000531043 TRAV4A0A0B4J268 109 aa8.85□□□□□ -0.99
HIF3A-214ENST00000531043 IGHV3-38A0A0C4DH36 116 aa8.85□□□□□ -0.99
HIF3A-214ENST00000531043 K7EP13 123 aa8.85□□□□□ -0.99
HIF3A-214ENST00000531043 PSCAO43653 123 aa8.85□□□□□ -0.99
HIF3A-214ENST00000531043 EIF3GO75821 320 aaKnown RBP eCLIP8.85□□□□□ -0.99
HIF3A-214ENST00000531043 ORM1P02763 201 aa8.85□□□□□ -0.99
HIF3A-214ENST00000531043 TCRBP04435 133 aa8.85□□□□□ -0.99
HIF3A-214ENST00000531043 HBG1P69891 147 aa8.85□□□□□ -0.99
HIF3A-214ENST00000531043 HBG2P69892 147 aa8.85□□□□□ -0.99
HIF3A-214ENST00000531043 NHLH2Q02577 135 aa8.85□□□□□ -0.99
HIF3A-214ENST00000531043 Q6AWC8 147 aa8.85□□□□□ -0.99
HIF3A-214ENST00000531043 STX12Q86Y82 276 aa8.85□□□□□ -0.99
HIF3A-214ENST00000531043 C10orf126Q8N4M7 172 aa8.85□□□□□ -0.99
HIF3A-214ENST00000531043 NTN5Q8WTR8 489 aaPredicted RBP8.85□□□□□ -0.99
HIF3A-214ENST00000531043 TXNDC17Q9BRA2 123 aa8.85□□□□□ -0.99
HIF3A-214ENST00000531043 NAGKQ9UJ70 344 aa8.85□□□□□ -0.99
HIF3A-214ENST00000531043 TRBV7-9A0A0J9YWB2 115 aa8.84□□□□□ -0.99
HIF3A-214ENST00000531043 IBA57-AS1B1ANH7 110 aa8.84□□□□□ -0.99
HIF3A-214ENST00000531043 C9JCJ5 164 aa8.84□□□□□ -0.99
HIF3A-214ENST00000531043 PVALBP20472 110 aaPredicted RBP8.84□□□□□ -0.99
HIF3A-214ENST00000531043 RANP62826 216 aaKnown RBP8.84□□□□□ -0.99
HIF3A-214ENST00000531043 ATP6V1FQ16864 119 aa8.84□□□□□ -0.99
HIF3A-214ENST00000531043 LINC01556Q5JQF7 62 aa8.84□□□□□ -0.99
HIF3A-214ENST00000531043 Q8N3U1 123 aa8.84□□□□□ -0.99
HIF3A-214ENST00000531043 OR4C5Q8NGB2 326 aa8.84□□□□□ -0.99
HIF3A-214ENST00000531043 SPXQ9BT56 116 aa8.84□□□□□ -0.99
HIF3A-214ENST00000531043 HMCN2Q8NDA2 5059 aa8.84□□□□□ -0.99
HIF3A-214ENST00000531043 LYRM1O43325 122 aa8.83□□□□□ -1
HIF3A-214ENST00000531043 IGHV3-30P01768 117 aa8.83□□□□□ -1
HIF3A-214ENST00000531043 IGHV3-33P01772 117 aa8.83□□□□□ -1
HIF3A-214ENST00000531043 IGHV3-30-3P0DP02 117 aa8.83□□□□□ -1
HIF3A-214ENST00000531043 IGHV3-30-5P0DP03 117 aa8.83□□□□□ -1
HIF3A-214ENST00000531043 GATA1P15976 413 aaPredicted RBP8.83□□□□□ -1
HIF3A-214ENST00000531043 PPT1P50897 306 aa8.83□□□□□ -1
HIF3A-214ENST00000531043 NHLRC2Q8NBF2 726 aa8.83□□□□□ -1
HIF3A-214ENST00000531043 NUDT15Q9NV35 164 aa8.83□□□□□ -1
HIF3A-214ENST00000531043 FAT3Q8TDW7 4589 aa8.83□□□□□ -1
HIF3A-214ENST00000531043 TRGV11A0A075B6L2 103 aa8.82□□□□□ -1
HIF3A-214ENST00000531043 RBAKDNA6NC62 111 aa8.82□□□□□ -1
HIF3A-214ENST00000531043 KRTAP29-1A8MX34 341 aaPredicted RBP8.82□□□□□ -1
HIF3A-214ENST00000531043 DIRC3C9JPN6 131 aa8.82□□□□□ -1
HIF3A-214ENST00000531043 M0R2P5 195 aa8.82□□□□□ -1
HIF3A-214ENST00000531043 TIRAPP58753 221 aa8.82□□□□□ -1
HIF3A-214ENST00000531043 CNPY1Q3B7I2 92 aa8.82□□□□□ -1
HIF3A-214ENST00000531043 FAM159AQ6UWV7 190 aa8.82□□□□□ -1
HIF3A-214ENST00000531043 Q6ZSA8 131 aa8.82□□□□□ -1
HIF3A-214ENST00000531043 OR5C1Q8NGR4 320 aa8.82□□□□□ -1
HIF3A-214ENST00000531043 TVP23CQ96ET8 276 aa8.82□□□□□ -1
HIF3A-214ENST00000531043 F6UZH7 168 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms