RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 HES3Q5TGS1 186 aa6.31□□□□□ -1.4
CSDE1-214ENST00000530886 NTN5Q8WTR8 489 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-214ENST00000530886 OBP2BQ9NPH6 170 aa6.31□□□□□ -1.4
CSDE1-214ENST00000530886 A0A0J9YY99 117 aa6.31□□□□□ -1.4
CSDE1-214ENST00000530886 ZNF815PA8K554 130 aa6.31□□□□□ -1.4
CSDE1-214ENST00000530886 SRRM5B3KS81 715 aa6.31□□□□□ -1.4
CSDE1-214ENST00000530886 MZT1Q08AG7 82 aa6.31□□□□□ -1.4
CSDE1-214ENST00000530886 PDE6HQ13956 83 aa6.31□□□□□ -1.4
CSDE1-214ENST00000530886 TDHQ8IZJ6 230 aa6.31□□□□□ -1.4
CSDE1-214ENST00000530886 C8orf49Q96NF6 230 aa6.31□□□□□ -1.4
CSDE1-214ENST00000530886 MRPS12O15235 138 aaKnown RBP6.31□□□□□ -1.4
CSDE1-214ENST00000530886 SRSF9Q13242 221 aaKnown RBP eCLIP6.31□□□□□ -1.4
CSDE1-214ENST00000530886 ATXN8Q156A1 80 aa6.31□□□□□ -1.4
CSDE1-214ENST00000530886 NGBQ9NPG2 151 aa6.31□□□□□ -1.4
CSDE1-214ENST00000530886 FSCN3Q9NQT6 498 aa6.31□□□□□ -1.4
CSDE1-214ENST00000530886 A0A0B4J2C4 111 aa6.3□□□□□ -1.4
CSDE1-214ENST00000530886 H3BMM0 161 aa6.3□□□□□ -1.4
CSDE1-214ENST00000530886 HERVK_113P63121 156 aa6.3□□□□□ -1.4
CSDE1-214ENST00000530886 NRACQ8N912 160 aa6.3□□□□□ -1.4
CSDE1-214ENST00000530886 KLF14Q8TD94 323 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-214ENST00000530886 UBE2WQ96B02 151 aa6.3□□□□□ -1.4
CSDE1-214ENST00000530886 PLEKHB2Q96CS7 222 aa6.3□□□□□ -1.4
CSDE1-214ENST00000530886 SCNM1Q9BWG6 230 aa6.3□□□□□ -1.4
CSDE1-214ENST00000530886 H3BTX0 84 aa6.3□□□□□ -1.4
CSDE1-214ENST00000530886 LINC01620Q4KN68 170 aa6.3□□□□□ -1.4
CSDE1-214ENST00000530886 DEFB119Q8N690 84 aa6.3□□□□□ -1.4
CSDE1-214ENST00000530886 SLC25A29Q8N8R3 303 aa6.3□□□□□ -1.4
CSDE1-214ENST00000530886 MRAPQ8TCY5 172 aa6.3□□□□□ -1.4
CSDE1-214ENST00000530886 LOC107984640A0A0U1RRK4 108 aa6.3□□□□□ -1.4
CSDE1-214ENST00000530886 GAS8-AS1O95177 125 aa6.3□□□□□ -1.4
CSDE1-214ENST00000530886 WT1P19544 449 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-214ENST00000530886 CRIP2P52943 208 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-214ENST00000530886 TMEM170BQ5T4T1 132 aa6.3□□□□□ -1.4
CSDE1-214ENST00000530886 C9orf153Q5TBE3 101 aa6.3□□□□□ -1.4
CSDE1-214ENST00000530886 DTX2Q86UW9 622 aa6.3□□□□□ -1.4
CSDE1-214ENST00000530886 CXorf67Q86X51 503 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-214ENST00000530886 TOMM6Q96B49 74 aa6.3□□□□□ -1.4
CSDE1-214ENST00000530886 SHANK2-AS3Q9BTD1 123 aa6.3□□□□□ -1.4
CSDE1-214ENST00000530886 CACNA1EQ15878 2313 aa6.3□□□□□ -1.4
CSDE1-214ENST00000530886 H3BRN7 92 aa6.29□□□□□ -1.4
CSDE1-214ENST00000530886 H3BT86 120 aa6.29□□□□□ -1.4
CSDE1-214ENST00000530886 EGR2P11161 476 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-214ENST00000530886 CRYGAP11844 174 aa6.29□□□□□ -1.4
CSDE1-214ENST00000530886 IGHV3-33P01772 117 aa6.29□□□□□ -1.4
CSDE1-214ENST00000530886 ACYP1P07311 99 aa6.29□□□□□ -1.4
CSDE1-214ENST00000530886 SCGB1D4Q6XE38 83 aa6.29□□□□□ -1.4
CSDE1-214ENST00000530886 TMEM263Q8WUH6 116 aaKnown RBP6.29□□□□□ -1.4
CSDE1-214ENST00000530886 HEATR1Q9H583 2144 aaKnown RBP6.29□□□□□ -1.4
CSDE1-214ENST00000530886 CNTRLQ7Z7A1 2325 aa6.29□□□□□ -1.4
CSDE1-214ENST00000530886 IGHV3-64DA0A0J9YX35 117 aa6.29□□□□□ -1.4
CSDE1-214ENST00000530886 IGLV2-23P01705 113 aa6.29□□□□□ -1.4
CSDE1-214ENST00000530886 LEAP2Q969E1 77 aa6.29□□□□□ -1.4
CSDE1-214ENST00000530886 TEX49A0A1B0GTD5 131 aa6.28□□□□□ -1.4
CSDE1-214ENST00000530886 TM4SF5O14894 197 aa6.28□□□□□ -1.4
CSDE1-214ENST00000530886 TGFAP01135 160 aa6.28□□□□□ -1.4
CSDE1-214ENST00000530886 CRYGBP07316 175 aa6.28□□□□□ -1.4
CSDE1-214ENST00000530886 SFTA2Q6UW10 78 aa6.28□□□□□ -1.4
CSDE1-214ENST00000530886 PI4KAP42356 2102 aa6.28□□□□□ -1.4
CSDE1-214ENST00000530886 B9A039 149 aa6.28□□□□□ -1.4
CSDE1-214ENST00000530886 EFNA4P52798 201 aa6.28□□□□□ -1.4
CSDE1-214ENST00000530886 ERCC8Q13216 396 aa6.28□□□□□ -1.4
CSDE1-214ENST00000530886 TMEM155Q4W5P6 130 aa6.28□□□□□ -1.4
CSDE1-214ENST00000530886 IGFLR1Q9H665 355 aa6.28□□□□□ -1.4
CSDE1-214ENST00000530886 UBTD1Q9HAC8 227 aa6.28□□□□□ -1.4
CSDE1-214ENST00000530886 RPUSD1Q9UJJ7 312 aaKnown RBP6.28□□□□□ -1.4
CSDE1-214ENST00000530886 TRBV30A0A0K0K1B3 111 aa6.27□□□□□ -1.41
CSDE1-214ENST00000530886 OOSP1A8MZH6 123 aa6.27□□□□□ -1.41
CSDE1-214ENST00000530886 ORMDL2Q53FV1 153 aa6.27□□□□□ -1.41
CSDE1-214ENST00000530886 PAPPA-AS1Q5QFB9 102 aa6.27□□□□□ -1.41
CSDE1-214ENST00000530886 SDIM1Q6ZPB5 146 aa6.27□□□□□ -1.41
CSDE1-214ENST00000530886 TRPT1Q86TN4 253 aaKnown RBP6.27□□□□□ -1.41
CSDE1-214ENST00000530886 ASCL2Q99929 193 aa6.27□□□□□ -1.41
CSDE1-214ENST00000530886 IGHV4-4A0A075B6R2 117 aa6.27□□□□□ -1.41
CSDE1-214ENST00000530886 LHBP01229 141 aa6.27□□□□□ -1.41
CSDE1-214ENST00000530886 CD3EP07766 207 aa6.27□□□□□ -1.41
CSDE1-214ENST00000530886 IGFBP4P22692 258 aa6.27□□□□□ -1.41
CSDE1-214ENST00000530886 CXCL5P42830 114 aa6.27□□□□□ -1.41
CSDE1-214ENST00000530886 GUSBP11Q6P575 273 aa6.27□□□□□ -1.41
CSDE1-214ENST00000530886 MSRB1Q9NZV6 116 aa6.27□□□□□ -1.41
CSDE1-214ENST00000530886 IGHV3-48P01763 117 aa6.26□□□□□ -1.41
CSDE1-214ENST00000530886 IGFBPL1Q8WX77 278 aa6.26□□□□□ -1.41
CSDE1-214ENST00000530886 FAM236AA0A1B0GUQ0 79 aa6.26□□□□□ -1.41
CSDE1-214ENST00000530886 FAM236BA0A1B0GV22 79 aa6.26□□□□□ -1.41
CSDE1-214ENST00000530886 EIF4EBP3O60516 100 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-214ENST00000530886 COX7CP15954 63 aa6.26□□□□□ -1.41
CSDE1-214ENST00000530886 C17orf77Q96MU5 243 aa6.26□□□□□ -1.41
CSDE1-214ENST00000530886 RELNP78509 3460 aa6.26□□□□□ -1.41
CSDE1-214ENST00000530886 RBAKDNA6NC62 111 aa6.26□□□□□ -1.41
CSDE1-214ENST00000530886 GATA1P15976 413 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-214ENST00000530886 LYZP61626 148 aa6.26□□□□□ -1.41
CSDE1-214ENST00000530886 ZNF56Q15929 161 aa6.26□□□□□ -1.41
CSDE1-214ENST00000530886 C8orf31Q8N9H6 132 aa6.26□□□□□ -1.41
CSDE1-214ENST00000530886 AMELXQ99217 191 aa6.26□□□□□ -1.41
CSDE1-214ENST00000530886 CRYGDP07320 174 aa6.25□□□□□ -1.41
CSDE1-214ENST00000530886 HERVK_113P61574 105 aa6.25□□□□□ -1.41
CSDE1-214ENST00000530886 FAM201AQ5SY85 155 aa6.25□□□□□ -1.41
CSDE1-214ENST00000530886 ZNF474Q6S9Z5 364 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-214ENST00000530886 ZNRF1Q8ND25 227 aa6.25□□□□□ -1.41
CSDE1-214ENST00000530886 KIR2DL5BQ8NHK3 375 aa6.25□□□□□ -1.41
CSDE1-214ENST00000530886 VKORC1Q9BQB6 163 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms