RNA–Protein interactions for RNA: ENST00000530724.1

TRIM3-210, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 651 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-210ENST00000530724 DYNAPQ8N1N2 210 aa9.01□□□□□ -0.97
TRIM3-210ENST00000530724 U3KQE9 123 aa9.01□□□□□ -0.97
TRIM3-210ENST00000530724 B9A039 149 aa9□□□□□ -0.97
TRIM3-210ENST00000530724 TIMM23O14925 209 aa9□□□□□ -0.97
TRIM3-210ENST00000530724 GOSR1O95249 250 aa9□□□□□ -0.97
TRIM3-210ENST00000530724 SPINK8P0C7L1 97 aa9□□□□□ -0.97
TRIM3-210ENST00000530724 INSL3P51460 131 aa9□□□□□ -0.97
TRIM3-210ENST00000530724 TMEM78Q5T7P6 136 aa9□□□□□ -0.97
TRIM3-210ENST00000530724 C1orf122Q6ZSJ8 110 aa9□□□□□ -0.97
TRIM3-210ENST00000530724 PIP4P1Q86T03 277 aa9□□□□□ -0.97
TRIM3-210ENST00000530724 NFE4Q86UQ8 179 aa9□□□□□ -0.97
TRIM3-210ENST00000530724 SYT8Q8NBV8 401 aa9□□□□□ -0.97
TRIM3-210ENST00000530724 CCL17Q92583 94 aa9□□□□□ -0.97
TRIM3-210ENST00000530724 CITED1Q99966 193 aa9□□□□□ -0.97
TRIM3-210ENST00000530724 ZFAND3Q9H8U3 227 aa9□□□□□ -0.97
TRIM3-210ENST00000530724 PGPEP1Q9NXJ5 209 aa9□□□□□ -0.97
TRIM3-210ENST00000530724 CEP290O15078 2479 aa9□□□□□ -0.97
TRIM3-210ENST00000530724 BUB3O43684 328 aa8.99□□□□□ -0.97
TRIM3-210ENST00000530724 NXPH4O95158 308 aa8.99□□□□□ -0.97
TRIM3-210ENST00000530724 BSPH1Q075Z2 132 aa8.99□□□□□ -0.97
TRIM3-210ENST00000530724 Q5PR19 223 aa8.99□□□□□ -0.97
TRIM3-210ENST00000530724 AMTNQ6UX39 209 aa8.99□□□□□ -0.97
TRIM3-210ENST00000530724 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.99□□□□□ -0.97
TRIM3-210ENST00000530724 WFDC3Q8IUB2 231 aa8.99□□□□□ -0.97
TRIM3-210ENST00000530724 APRG1Q8IVJ8 170 aa8.99□□□□□ -0.97
TRIM3-210ENST00000530724 Q8TAT8 98 aa8.99□□□□□ -0.97
TRIM3-210ENST00000530724 WFDC12Q8WWY7 111 aa8.99□□□□□ -0.97
TRIM3-210ENST00000530724 CARD19Q96LW7 228 aa8.99□□□□□ -0.97
TRIM3-210ENST00000530724 C11orf21Q9P2W6 132 aa8.99□□□□□ -0.97
TRIM3-210ENST00000530724 RAXQ9Y2V3 346 aa8.99□□□□□ -0.97
TRIM3-210ENST00000530724 IGHV4OR15-8A0A075B7B6 117 aa8.98□□□□□ -0.97
TRIM3-210ENST00000530724 A0A087WW49 117 aa8.98□□□□□ -0.97
TRIM3-210ENST00000530724 SPAARA0A1B0GVQ0 90 aa8.98□□□□□ -0.97
TRIM3-210ENST00000530724 CLEC3BP05452 202 aa8.98□□□□□ -0.97
TRIM3-210ENST00000530724 ZNF688P0C7X2 276 aa8.98□□□□□ -0.97
TRIM3-210ENST00000530724 P0DMU3 169 aa8.98□□□□□ -0.97
TRIM3-210ENST00000530724 FAM231AP0DMU4 169 aa8.98□□□□□ -0.97
TRIM3-210ENST00000530724 FAM231CP0DMU5 169 aa8.98□□□□□ -0.97
TRIM3-210ENST00000530724 GATA1P15976 413 aaPredicted RBP8.98□□□□□ -0.97
TRIM3-210ENST00000530724 SUMO2P61956 95 aaKnown RBP8.98□□□□□ -0.97
TRIM3-210ENST00000530724 ATP5G2Q06055 141 aa8.98□□□□□ -0.97
TRIM3-210ENST00000530724 NDUFA11Q86Y39 141 aa8.98□□□□□ -0.97
TRIM3-210ENST00000530724 SCGB3A1Q96QR1 104 aa8.98□□□□□ -0.97
TRIM3-210ENST00000530724 PRADC1Q9BSG0 188 aa8.98□□□□□ -0.97
TRIM3-210ENST00000530724 INTS1Q8N201 2190 aaKnown RBP8.97□□□□□ -0.97
TRIM3-210ENST00000530724 A8MWV9 139 aa8.97□□□□□ -0.97
TRIM3-210ENST00000530724 TRGV3P03979 118 aa8.97□□□□□ -0.97
TRIM3-210ENST00000530724 APELAP0DMC3 54 aa8.97□□□□□ -0.97
TRIM3-210ENST00000530724 XGP55808 180 aa8.97□□□□□ -0.97
TRIM3-210ENST00000530724 MRPL23Q16540 153 aaKnown RBP8.97□□□□□ -0.97
TRIM3-210ENST00000530724 MINOS1Q5TGZ0 78 aa8.97□□□□□ -0.97
TRIM3-210ENST00000530724 SLC25A29Q8N8R3 303 aa8.97□□□□□ -0.97
TRIM3-210ENST00000530724 FAM110DQ8TAY7 271 aaPredicted RBP8.97□□□□□ -0.97
TRIM3-210ENST00000530724 GLMPQ8WWB7 406 aa8.97□□□□□ -0.97
TRIM3-210ENST00000530724 BAALCQ8WXS3 180 aa8.97□□□□□ -0.97
TRIM3-210ENST00000530724 TMEM141Q96I45 108 aa8.97□□□□□ -0.97
TRIM3-210ENST00000530724 AGPAT4-IT1Q9H0P7 198 aa8.97□□□□□ -0.97
TRIM3-210ENST00000530724 MINOS1-NBL1R4GNA1 71 aa8.97□□□□□ -0.97
TRIM3-210ENST00000530724 KNTC1P50748 2209 aa8.96□□□□□ -0.97
TRIM3-210ENST00000530724 A0A0J9YY99 117 aa8.96□□□□□ -0.98
TRIM3-210ENST00000530724 C11orf86A6NJI1 115 aa8.96□□□□□ -0.98
TRIM3-210ENST00000530724 RNF223E7ERA6 249 aa8.96□□□□□ -0.98
TRIM3-210ENST00000530724 MT-ATP8P03928 68 aa8.96□□□□□ -0.98
TRIM3-210ENST00000530724 PRTN3P24158 256 aa8.96□□□□□ -0.98
TRIM3-210ENST00000530724 HERVK_113P61574 105 aa8.96□□□□□ -0.98
TRIM3-210ENST00000530724 FHL3Q13643 280 aa8.96□□□□□ -0.98
TRIM3-210ENST00000530724 C10orf126Q8N4M7 172 aa8.96□□□□□ -0.98
TRIM3-210ENST00000530724 RASL10AQ92737 203 aa8.96□□□□□ -0.98
TRIM3-210ENST00000530724 SELENOKQ9Y6D0 94 aa8.96□□□□□ -0.98
TRIM3-210ENST00000530724 WDR87Q6ZQQ6 2873 aa8.95□□□□□ -0.98
TRIM3-210ENST00000530724 HEATR1Q9H583 2144 aaKnown RBP8.95□□□□□ -0.98
TRIM3-210ENST00000530724 TRAV8-2A0A0B4J237 113 aa8.95□□□□□ -0.98
TRIM3-210ENST00000530724 A0A0J9YX75 114 aa8.95□□□□□ -0.98
TRIM3-210ENST00000530724 CLPSL1A2RUU4 121 aa8.95□□□□□ -0.98
TRIM3-210ENST00000530724 E7EQL1 145 aa8.95□□□□□ -0.98
TRIM3-210ENST00000530724 HLA-DMBP28068 263 aa8.95□□□□□ -0.98
TRIM3-210ENST00000530724 RPL13AP40429 203 aaKnown RBP8.95□□□□□ -0.98
TRIM3-210ENST00000530724 GAGE5Q13069 117 aa8.95□□□□□ -0.98
TRIM3-210ENST00000530724 GAGE6Q13070 117 aa8.95□□□□□ -0.98
TRIM3-210ENST00000530724 TIMM17AQ99595 171 aa8.95□□□□□ -0.98
TRIM3-210ENST00000530724 DPH3P1Q9H4G8 78 aa8.95□□□□□ -0.98
TRIM3-210ENST00000530724 DYNLRB1Q9NP97 96 aa8.95□□□□□ -0.98
TRIM3-210ENST00000530724 CFAP54Q96N23 3096 aa8.94□□□□□ -0.98
TRIM3-210ENST00000530724 A0A0B4J2C4 111 aa8.94□□□□□ -0.98
TRIM3-210ENST00000530724 A0A0G2JNJ9 132 aa8.94□□□□□ -0.98
TRIM3-210ENST00000530724 PRSS29PA6NIE9 313 aa8.94□□□□□ -0.98
TRIM3-210ENST00000530724 ZNF815PA8K554 130 aa8.94□□□□□ -0.98
TRIM3-210ENST00000530724 PRAC2D3DTV9 90 aa8.94□□□□□ -0.98
TRIM3-210ENST00000530724 RHODO00212 210 aa8.94□□□□□ -0.98
TRIM3-210ENST00000530724 IGHV3-30P01768 117 aa8.94□□□□□ -0.98
TRIM3-210ENST00000530724 IGHV3-30-5P0DP03 117 aa8.94□□□□□ -0.98
TRIM3-210ENST00000530724 EFNA4P52798 201 aa8.94□□□□□ -0.98
TRIM3-210ENST00000530724 ZFAND6Q6FIF0 208 aa8.94□□□□□ -0.98
TRIM3-210ENST00000530724 ITLN2Q8WWU7 325 aaPredicted RBP8.94□□□□□ -0.98
TRIM3-210ENST00000530724 FAM19A4Q96LR4 140 aa8.94□□□□□ -0.98
TRIM3-210ENST00000530724 LINC00477Q96M19 166 aa8.94□□□□□ -0.98
TRIM3-210ENST00000530724 SPANXDQ9BXN6 97 aa8.94□□□□□ -0.98
TRIM3-210ENST00000530724 Q9UFV3 132 aa8.94□□□□□ -0.98
TRIM3-210ENST00000530724 MSRB2Q9Y3D2 182 aa8.94□□□□□ -0.98
TRIM3-210ENST00000530724 IGIPA6NJ69 53 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms