RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 PTTG1IPP53801 180 aa2.42□□□□□ -2.02
PTPRC-213ENST00000529828 PIGPP57054 158 aa2.42□□□□□ -2.02
PTPRC-213ENST00000529828 SNX29P2Q8IUI4 249 aa2.42□□□□□ -2.02
PTPRC-213ENST00000529828 SAMD12Q8N8I0 201 aa2.42□□□□□ -2.02
PTPRC-213ENST00000529828 ORAOV1Q8WV07 137 aa2.42□□□□□ -2.02
PTPRC-213ENST00000529828 LINC01587Q99440 93 aa2.42□□□□□ -2.02
PTPRC-213ENST00000529828 NKX6-2Q9C056 277 aaPredicted RBP2.42□□□□□ -2.02
PTPRC-213ENST00000529828 SLC25A22Q9H936 323 aa2.42□□□□□ -2.02
PTPRC-213ENST00000529828 RPRMQ9NS64 109 aa2.42□□□□□ -2.02
PTPRC-213ENST00000529828 HSPB7Q9UBY9 170 aa2.42□□□□□ -2.02
PTPRC-213ENST00000529828 C3orf85A0A1B0GTC6 90 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 GAGE12BA1L429 117 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 ZFP92A6NM28 416 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 ISLRO14498 428 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 UPK1BO75841 260 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 GAGE7O76087 117 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 ATG12O94817 140 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 GAGE12FP0CL80 117 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 GAGE12GP0CL81 117 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 GAGE12IP0CL82 117 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 SLC25A4P12235 298 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 PRSS3P35030 304 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 SUPT4H1P63272 117 aaKnown RBP2.41□□□□□ -2.02
PTPRC-213ENST00000529828 MEF2DQ14814 521 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 C2orf83Q53S99 150 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 OCIAD2Q56VL3 154 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 UBE2NLQ5JXB2 153 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 LINC01551Q86U37 167 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 FAM219AQ8IW50 185 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 OR8I2Q8N0Y5 310 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 RXFP4Q8TDU9 374 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 RPUSD4Q96CM3 377 aaKnown RBP2.41□□□□□ -2.02
PTPRC-213ENST00000529828 S100A16Q96FQ6 103 aaKnown RBP2.41□□□□□ -2.02
PTPRC-213ENST00000529828 UPK3BQ9BT76 320 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 SLC25A32Q9H2D1 315 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 WFDC1Q9HC57 220 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 DNAJC4Q9NNZ3 241 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 CACNG5Q9UF02 275 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 MRPS16Q9Y3D3 137 aaKnown RBP2.41□□□□□ -2.02
PTPRC-213ENST00000529828 CSDC2Q9Y534 153 aaKnown RBP2.41□□□□□ -2.02
PTPRC-213ENST00000529828 TNXBP22105 4242 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 IGKV1D-37A0A075B6S9 117 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 A0A087WTM6 91 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 A0A096LPF7 62 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 A0A0U1RRA0 63 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 PPP1R2P9O14990 202 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 PRAF2O60831 178 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 FGF7P21781 194 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 LINC00310P59036 64 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 CKS1BP61024 79 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 RHOBP62745 196 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 HIST1H1AQ02539 215 aaPredicted RBP2.41□□□□□ -2.02
PTPRC-213ENST00000529828 FABP9Q0Z7S8 132 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 UBE2V1Q13404 147 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 SPATA31B1PQ5VZV4 182 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 KCNIP4Q6PIL6 250 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 FAM159AQ6UWV7 190 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 RNASEH2CQ8TDP1 164 aaKnown RBP2.41□□□□□ -2.02
PTPRC-213ENST00000529828 PRR13Q9NZ81 148 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 CACFD1Q9UGQ2 172 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 GPR132Q9UNW8 380 aa2.41□□□□□ -2.02
PTPRC-213ENST00000529828 TIMM8BQ9Y5J9 83 aaPredicted RBP2.41□□□□□ -2.02
PTPRC-213ENST00000529828 TRAV8-2A0A0B4J237 113 aa2.4□□□□□ -2.02
PTPRC-213ENST00000529828 A8MTW9 85 aa2.4□□□□□ -2.02
PTPRC-213ENST00000529828 OR5AC1P0C628 307 aa2.4□□□□□ -2.02
PTPRC-213ENST00000529828 GCSHP23434 173 aa2.4□□□□□ -2.02
PTPRC-213ENST00000529828 GATA2P23769 480 aaPredicted RBP2.4□□□□□ -2.02
PTPRC-213ENST00000529828 TSPOP30536 169 aa2.4□□□□□ -2.02
PTPRC-213ENST00000529828 FAUP35544 74 aaKnown RBP2.4□□□□□ -2.02
PTPRC-213ENST00000529828 CAV2P51636 162 aa2.4□□□□□ -2.02
PTPRC-213ENST00000529828 UCP3P55916 312 aa2.4□□□□□ -2.02
PTPRC-213ENST00000529828 UBE2MP61081 183 aaKnown RBP2.4□□□□□ -2.02
PTPRC-213ENST00000529828 RND3P61587 244 aa2.4□□□□□ -2.02
PTPRC-213ENST00000529828 LSM3P62310 102 aaKnown RBP2.4□□□□□ -2.02
PTPRC-213ENST00000529828 KLF9Q13886 244 aaPredicted RBP2.4□□□□□ -2.02
PTPRC-213ENST00000529828 KIR3DS1Q14943 382 aa2.4□□□□□ -2.02
PTPRC-213ENST00000529828 CTF1Q16619 201 aa2.4□□□□□ -2.02
PTPRC-213ENST00000529828 SCGB2B2Q4G0G5 96 aa2.4□□□□□ -2.02
PTPRC-213ENST00000529828 PYY3Q5JQD4 70 aa2.4□□□□□ -2.02
PTPRC-213ENST00000529828 STEAP1BQ6NZ63 245 aa2.4□□□□□ -2.02
PTPRC-213ENST00000529828 CCDC190Q86UF4 302 aa2.4□□□□□ -2.02
PTPRC-213ENST00000529828 SVBPQ8N300 66 aa2.4□□□□□ -2.02
PTPRC-213ENST00000529828 INO80EQ8NBZ0 244 aaPredicted RBP2.4□□□□□ -2.02
PTPRC-213ENST00000529828 OR1L4Q8NGR5 311 aa2.4□□□□□ -2.02
PTPRC-213ENST00000529828 OR13C8Q8NGS7 320 aa2.4□□□□□ -2.02
PTPRC-213ENST00000529828 ISOC2Q96AB3 205 aa2.4□□□□□ -2.02
PTPRC-213ENST00000529828 ZNF503Q96F45 646 aa2.4□□□□□ -2.02
PTPRC-213ENST00000529828 C16orf74Q96GX8 76 aa2.4□□□□□ -2.02
PTPRC-213ENST00000529828 SCGB3A2Q96PL1 93 aa2.4□□□□□ -2.02
PTPRC-213ENST00000529828 SNHG12Q9BXW3 62 aa2.4□□□□□ -2.02
PTPRC-213ENST00000529828 IGSF23A1L1A6 192 aa2.4□□□□□ -2.03
PTPRC-213ENST00000529828 DUSP14O95147 198 aaKnown RBP2.4□□□□□ -2.03
PTPRC-213ENST00000529828 NXPH4O95158 308 aa2.4□□□□□ -2.03
PTPRC-213ENST00000529828 IFNA1P01562 189 aa2.4□□□□□ -2.03
PTPRC-213ENST00000529828 ORM1P02763 201 aa2.4□□□□□ -2.03
PTPRC-213ENST00000529828 CD3DP04234 171 aa2.4□□□□□ -2.03
PTPRC-213ENST00000529828 SNRPCP09234 159 aaKnown RBP2.4□□□□□ -2.03
PTPRC-213ENST00000529828 ORM2P19652 201 aa2.4□□□□□ -2.03
PTPRC-213ENST00000529828 GALR1P47211 349 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms