RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 TMEM158Q8WZ71 300 aa6.39□□□□□ -1.39
CSTF3-208ENST00000528865 MRAP2Q96G30 205 aa6.39□□□□□ -1.39
CSTF3-208ENST00000528865 FAM19A4Q96LR4 140 aa6.39□□□□□ -1.39
CSTF3-208ENST00000528865 BPESC1Q9GZL8 116 aa6.39□□□□□ -1.39
CSTF3-208ENST00000528865 CST9LQ9H4G1 147 aa6.39□□□□□ -1.39
CSTF3-208ENST00000528865 DSPP15924 2871 aaKnown RBP6.39□□□□□ -1.39
CSTF3-208ENST00000528865 GVINP1Q7Z2Y8 2422 aa6.38□□□□□ -1.39
CSTF3-208ENST00000528865 IGHV1-69DA0A0B4J2H0 117 aa6.38□□□□□ -1.39
CSTF3-208ENST00000528865 IGHV3-66A0A0C4DH42 116 aa6.38□□□□□ -1.39
CSTF3-208ENST00000528865 TRBV7-9A0A0J9YWB2 115 aa6.38□□□□□ -1.39
CSTF3-208ENST00000528865 NDUFA4O00483 81 aa6.38□□□□□ -1.39
CSTF3-208ENST00000528865 IGHV1-69P01742 117 aa6.38□□□□□ -1.39
CSTF3-208ENST00000528865 IGKCP01834 107 aa6.38□□□□□ -1.39
CSTF3-208ENST00000528865 TRGV3P03979 118 aa6.38□□□□□ -1.39
CSTF3-208ENST00000528865 IGF1P05019 195 aa6.38□□□□□ -1.39
CSTF3-208ENST00000528865 SMIM17P0DL12 118 aa6.38□□□□□ -1.39
CSTF3-208ENST00000528865 LAGE3Q14657 143 aa6.38□□□□□ -1.39
CSTF3-208ENST00000528865 ERASQ7Z444 233 aa6.38□□□□□ -1.39
CSTF3-208ENST00000528865 GPHB5Q86YW7 130 aa6.38□□□□□ -1.39
CSTF3-208ENST00000528865 POM121L12Q8N7R1 296 aa6.38□□□□□ -1.39
CSTF3-208ENST00000528865 C16orf92Q96LL3 132 aa6.38□□□□□ -1.39
CSTF3-208ENST00000528865 C20orf173Q96LM9 149 aa6.38□□□□□ -1.39
CSTF3-208ENST00000528865 UBTD1Q9HAC8 227 aa6.38□□□□□ -1.39
CSTF3-208ENST00000528865 A0A087WX48 190 aa6.37□□□□□ -1.39
CSTF3-208ENST00000528865 IGKV2D-26A0A0A0MRZ7 120 aa6.37□□□□□ -1.39
CSTF3-208ENST00000528865 TRAV12-1A0A0B4J245 112 aa6.37□□□□□ -1.39
CSTF3-208ENST00000528865 GAGE12BA1L429 117 aa6.37□□□□□ -1.39
CSTF3-208ENST00000528865 GAGE10A6NGK3 116 aa6.37□□□□□ -1.39
CSTF3-208ENST00000528865 K7EMI3 77 aa6.37□□□□□ -1.39
CSTF3-208ENST00000528865 ZNF207O43670 478 aaKnown RBP6.37□□□□□ -1.39
CSTF3-208ENST00000528865 DPM2O94777 84 aa6.37□□□□□ -1.39
CSTF3-208ENST00000528865 PRSS1P07477 247 aa6.37□□□□□ -1.39
CSTF3-208ENST00000528865 OCIAD2Q56VL3 154 aa6.37□□□□□ -1.39
CSTF3-208ENST00000528865 GTF2H5Q6ZYL4 71 aa6.37□□□□□ -1.39
CSTF3-208ENST00000528865 WFDC3Q8IUB2 231 aa6.37□□□□□ -1.39
CSTF3-208ENST00000528865 ZFAND2AQ8N6M9 145 aa6.37□□□□□ -1.39
CSTF3-208ENST00000528865 MYOZ3Q8TDC0 251 aa6.37□□□□□ -1.39
CSTF3-208ENST00000528865 USMG5Q96IX5 58 aa6.37□□□□□ -1.39
CSTF3-208ENST00000528865 C18orf15Q96N68 181 aa6.37□□□□□ -1.39
CSTF3-208ENST00000528865 C20orf78Q9BR46 151 aa6.37□□□□□ -1.39
CSTF3-208ENST00000528865 ANKHD1Q8IWZ3 2542 aaKnown RBP6.37□□□□□ -1.39
CSTF3-208ENST00000528865 TPRP12270 2363 aaKnown RBP6.36□□□□□ -1.39
CSTF3-208ENST00000528865 IGHV3OR16-13A0A075B7E8 117 aa6.36□□□□□ -1.39
CSTF3-208ENST00000528865 IGHV3-49A0A0A0MS15 119 aa6.36□□□□□ -1.39
CSTF3-208ENST00000528865 IGHV3-74A0A0B4J1X5 117 aa6.36□□□□□ -1.39
CSTF3-208ENST00000528865 TRAV21A0A0B4J279 112 aa6.36□□□□□ -1.39
CSTF3-208ENST00000528865 A6NDX4 124 aa6.36□□□□□ -1.39
CSTF3-208ENST00000528865 LINC01619G3V211 115 aa6.36□□□□□ -1.39
CSTF3-208ENST00000528865 K7EP34 96 aa6.36□□□□□ -1.39
CSTF3-208ENST00000528865 M0R381 172 aa6.36□□□□□ -1.39
CSTF3-208ENST00000528865 IGHG2P01859 326 aa6.36□□□□□ -1.39
CSTF3-208ENST00000528865 ARL3P36405 182 aa6.36□□□□□ -1.39
CSTF3-208ENST00000528865 UQCRFS1P47985 274 aa6.36□□□□□ -1.39
CSTF3-208ENST00000528865 NMUP48645 174 aa6.36□□□□□ -1.39
CSTF3-208ENST00000528865 TAL2Q16559 108 aa6.36□□□□□ -1.39
CSTF3-208ENST00000528865 PRR9Q5T870 116 aa6.36□□□□□ -1.39
CSTF3-208ENST00000528865 JMJD8Q96S16 334 aa6.36□□□□□ -1.39
CSTF3-208ENST00000528865 FOXC2Q99958 501 aa6.36□□□□□ -1.39
CSTF3-208ENST00000528865 TM2D2Q9BX73 214 aa6.36□□□□□ -1.39
CSTF3-208ENST00000528865 PTPRZ1P23471 2315 aaPredicted RBP6.36□□□□□ -1.39
CSTF3-208ENST00000528865 A0A0G2JLM5 398 aa6.35□□□□□ -1.39
CSTF3-208ENST00000528865 TMEM8BA6NDV4 472 aa6.35□□□□□ -1.39
CSTF3-208ENST00000528865 IGHV4-39P01824 125 aa6.35□□□□□ -1.39
CSTF3-208ENST00000528865 SMIM13P0DJ93 91 aa6.35□□□□□ -1.39
CSTF3-208ENST00000528865 SLC25A16P16260 332 aa6.35□□□□□ -1.39
CSTF3-208ENST00000528865 PCP4P48539 62 aa6.35□□□□□ -1.39
CSTF3-208ENST00000528865 SPANXN1Q5VSR9 72 aa6.35□□□□□ -1.39
CSTF3-208ENST00000528865 Q6ZQT7 251 aa6.35□□□□□ -1.39
CSTF3-208ENST00000528865 AP1S3Q96PC3 154 aa6.35□□□□□ -1.39
CSTF3-208ENST00000528865 SMIM2Q9BVW6 85 aa6.35□□□□□ -1.39
CSTF3-208ENST00000528865 PRORYQ9H606 182 aa6.35□□□□□ -1.39
CSTF3-208ENST00000528865 ZNF580Q9UK33 172 aa6.35□□□□□ -1.39
CSTF3-208ENST00000528865 NBEAQ8NFP9 2946 aa6.35□□□□□ -1.39
CSTF3-208ENST00000528865 ZNF292O60281 2723 aa6.34□□□□□ -1.39
CSTF3-208ENST00000528865 PRRC2CQ9Y520 2896 aaKnown RBP6.34□□□□□ -1.39
CSTF3-208ENST00000528865 TRBV25-1A0A075B6N4 114 aa6.34□□□□□ -1.39
CSTF3-208ENST00000528865 A0A1W2PPM0 123 aa6.34□□□□□ -1.39
CSTF3-208ENST00000528865 H3BUT2 72 aa6.34□□□□□ -1.39
CSTF3-208ENST00000528865 H3BVH4 76 aa6.34□□□□□ -1.39
CSTF3-208ENST00000528865 H7C1H1 209 aa6.34□□□□□ -1.39
CSTF3-208ENST00000528865 C19orf84I3L1E1 186 aa6.34□□□□□ -1.39
CSTF3-208ENST00000528865 NXPH4O95158 308 aa6.34□□□□□ -1.39
CSTF3-208ENST00000528865 RPL32P62910 135 aaKnown RBP6.34□□□□□ -1.39
CSTF3-208ENST00000528865 ORMDL2Q53FV1 153 aa6.34□□□□□ -1.39
CSTF3-208ENST00000528865 ZC2HC1BQ5TFG8 222 aa6.34□□□□□ -1.39
CSTF3-208ENST00000528865 UNQ9165/PRO28630Q6UXU0 137 aa6.34□□□□□ -1.39
CSTF3-208ENST00000528865 GTSCR1Q86UQ5 136 aa6.34□□□□□ -1.39
CSTF3-208ENST00000528865 TMEM219Q86XT9 240 aa6.34□□□□□ -1.39
CSTF3-208ENST00000528865 OR10J6PQ8NGY7 276 aa6.34□□□□□ -1.39
CSTF3-208ENST00000528865 PHLDA1Q8WV24 401 aaPredicted RBP6.34□□□□□ -1.39
CSTF3-208ENST00000528865 RASL10AQ92737 203 aa6.34□□□□□ -1.39
CSTF3-208ENST00000528865 TOMM6Q96B49 74 aa6.34□□□□□ -1.39
CSTF3-208ENST00000528865 DPH3P1Q9H4G8 78 aa6.34□□□□□ -1.39
CSTF3-208ENST00000528865 MRPL35Q9NZE8 188 aaKnown RBP6.34□□□□□ -1.39
CSTF3-208ENST00000528865 ZFHX2Q9C0A1 2572 aaPredicted RBP6.34□□□□□ -1.39
CSTF3-208ENST00000528865 WNK2Q9Y3S1 2297 aa6.33□□□□□ -1.4
CSTF3-208ENST00000528865 TRAV26-2A0A0B4J265 109 aa6.33□□□□□ -1.4
CSTF3-208ENST00000528865 TRAV40A0A0B4J280 105 aa6.33□□□□□ -1.4
CSTF3-208ENST00000528865 RNF223E7ERA6 249 aa6.33□□□□□ -1.4
CSTF3-208ENST00000528865 K7EMT4 169 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms