RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 LOC102724200A0A096LPH7 203 aaPredicted RBP9.01□□□□□ -0.97
USF1-208ENST00000528768 PPIFP30405 207 aaKnown RBP9.01□□□□□ -0.97
USF1-208ENST00000528768 KRTDAPP60985 99 aa9.01□□□□□ -0.97
USF1-208ENST00000528768 TMEM78Q5T7P6 136 aa9.01□□□□□ -0.97
USF1-208ENST00000528768 GDF5OSQ5U4N7 250 aa9.01□□□□□ -0.97
USF1-208ENST00000528768 C16orf92Q96LL3 132 aa9.01□□□□□ -0.97
USF1-208ENST00000528768 C8orf49Q96NF6 230 aa9.01□□□□□ -0.97
USF1-208ENST00000528768 DUX5Q96PT3 197 aa9.01□□□□□ -0.97
USF1-208ENST00000528768 SSBP4Q9BWG4 385 aaPredicted RBP9.01□□□□□ -0.97
USF1-208ENST00000528768 NRN1Q9NPD7 142 aa9.01□□□□□ -0.97
USF1-208ENST00000528768 CLPSL1A2RUU4 121 aa9□□□□□ -0.97
USF1-208ENST00000528768 M0R2Z0 102 aa9□□□□□ -0.97
USF1-208ENST00000528768 NTF3P20783 257 aa9□□□□□ -0.97
USF1-208ENST00000528768 LINC00310P59036 64 aa9□□□□□ -0.97
USF1-208ENST00000528768 CTAG1AP78358 180 aa9□□□□□ -0.97
USF1-208ENST00000528768 HIST1H1AQ02539 215 aaPredicted RBP9□□□□□ -0.97
USF1-208ENST00000528768 CDPF1Q6NVV7 123 aa9□□□□□ -0.97
USF1-208ENST00000528768 RNASEKQ6P5S7 137 aaKnown RBP9□□□□□ -0.97
USF1-208ENST00000528768 Q6ZWC4 215 aa9□□□□□ -0.97
USF1-208ENST00000528768 TPPP3Q9BW30 176 aa9□□□□□ -0.97
USF1-208ENST00000528768 PRO1933Q9H354 126 aa9□□□□□ -0.97
USF1-208ENST00000528768 IGHV3OR16-8A0A075B7F1 116 aa8.99□□□□□ -0.97
USF1-208ENST00000528768 F2Z2F3 143 aa8.99□□□□□ -0.97
USF1-208ENST00000528768 OVOL1O14753 267 aa8.99□□□□□ -0.97
USF1-208ENST00000528768 OR5AL1P0C617 328 aa8.99□□□□□ -0.97
USF1-208ENST00000528768 CRIP1P50238 77 aa8.99□□□□□ -0.97
USF1-208ENST00000528768 ZNF138P52744 262 aa8.99□□□□□ -0.97
USF1-208ENST00000528768 FAM106AQ4KMX7 169 aa8.99□□□□□ -0.97
USF1-208ENST00000528768 C8orf86Q6ZUL3 223 aa8.99□□□□□ -0.97
USF1-208ENST00000528768 FER1L6-AS1Q8NA97 138 aa8.99□□□□□ -0.97
USF1-208ENST00000528768 OR4X2Q8NGF9 303 aa8.99□□□□□ -0.97
USF1-208ENST00000528768 VAMP8Q9BV40 100 aa8.99□□□□□ -0.97
USF1-208ENST00000528768 NPFFR1Q9GZQ6 430 aa8.99□□□□□ -0.97
USF1-208ENST00000528768 LINC00527Q9UJ94 153 aa8.99□□□□□ -0.97
USF1-208ENST00000528768 LENEPQ9Y5L5 61 aa8.99□□□□□ -0.97
USF1-208ENST00000528768 C20orf202A1L168 122 aa8.98□□□□□ -0.97
USF1-208ENST00000528768 NDUFA7O95182 113 aa8.98□□□□□ -0.97
USF1-208ENST00000528768 IGLV1-40P01703 118 aa8.98□□□□□ -0.97
USF1-208ENST00000528768 APOHP02749 345 aaPredicted RBP8.98□□□□□ -0.97
USF1-208ENST00000528768 ORM1P02763 201 aa8.98□□□□□ -0.97
USF1-208ENST00000528768 PMCHL1Q16048 86 aa8.98□□□□□ -0.97
USF1-208ENST00000528768 ZNF493Q6ZR52 646 aa8.98□□□□□ -0.97
USF1-208ENST00000528768 NIT1Q86X76 327 aa8.98□□□□□ -0.97
USF1-208ENST00000528768 ZNF664Q8N3J9 261 aa8.98□□□□□ -0.97
USF1-208ENST00000528768 GLMPQ8WWB7 406 aa8.98□□□□□ -0.97
USF1-208ENST00000528768 RCHY1Q96PM5 261 aa8.98□□□□□ -0.97
USF1-208ENST00000528768 VGLL1Q99990 258 aa8.98□□□□□ -0.97
USF1-208ENST00000528768 PPP1R14DQ9NXH3 145 aa8.98□□□□□ -0.97
USF1-208ENST00000528768 TENM3Q9P273 2699 aa8.98□□□□□ -0.97
USF1-208ENST00000528768 IGHV3-66A0A0C4DH42 116 aa8.97□□□□□ -0.97
USF1-208ENST00000528768 K7EMT4 169 aa8.97□□□□□ -0.97
USF1-208ENST00000528768 ZNF207O43670 478 aaKnown RBP8.97□□□□□ -0.97
USF1-208ENST00000528768 ARMS2P0C7Q2 107 aa8.97□□□□□ -0.97
USF1-208ENST00000528768 LINC00614P0C842 121 aa8.97□□□□□ -0.97
USF1-208ENST00000528768 BLCAPP62952 87 aa8.97□□□□□ -0.97
USF1-208ENST00000528768 DEFB112Q30KQ8 113 aa8.97□□□□□ -0.97
USF1-208ENST00000528768 LBHQ53QV2 105 aaPredicted RBP8.97□□□□□ -0.97
USF1-208ENST00000528768 LYZL1Q6UWQ5 148 aa8.97□□□□□ -0.97
USF1-208ENST00000528768 TEX43Q6ZNM6 134 aa8.97□□□□□ -0.97
USF1-208ENST00000528768 C9orf47Q6ZRZ4 202 aa8.97□□□□□ -0.97
USF1-208ENST00000528768 OR10J6PQ8NGY7 276 aa8.97□□□□□ -0.97
USF1-208ENST00000528768 LINC00477Q96M19 166 aa8.97□□□□□ -0.97
USF1-208ENST00000528768 PEF1Q9UBV8 284 aaKnown RBP8.97□□□□□ -0.97
USF1-208ENST00000528768 UFC1Q9Y3C8 167 aa8.97□□□□□ -0.97
USF1-208ENST00000528768 TMSB15BA0A087X1C1 80 aa8.96□□□□□ -0.98
USF1-208ENST00000528768 IGHG4P01861 327 aa8.96□□□□□ -0.98
USF1-208ENST00000528768 HLA-DMBP28068 263 aa8.96□□□□□ -0.98
USF1-208ENST00000528768 CTRLP40313 264 aa8.96□□□□□ -0.98
USF1-208ENST00000528768 LINC01559Q495D7 138 aa8.96□□□□□ -0.98
USF1-208ENST00000528768 IGFL4Q6B9Z1 124 aa8.96□□□□□ -0.98
USF1-208ENST00000528768 SMIM15Q7Z3B0 74 aa8.96□□□□□ -0.98
USF1-208ENST00000528768 KLHDC1Q8N7A1 406 aa8.96□□□□□ -0.98
USF1-208ENST00000528768 ZNF738Q8NE65 137 aa8.96□□□□□ -0.98
USF1-208ENST00000528768 Q8TAT8 98 aa8.96□□□□□ -0.98
USF1-208ENST00000528768 NDUFAF3Q9BU61 184 aa8.96□□□□□ -0.98
USF1-208ENST00000528768 IGHV3OR16-13A0A075B7E8 117 aa8.95□□□□□ -0.98
USF1-208ENST00000528768 IGHV3-49A0A0A0MS15 119 aa8.95□□□□□ -0.98
USF1-208ENST00000528768 IGHV3-74A0A0B4J1X5 117 aa8.95□□□□□ -0.98
USF1-208ENST00000528768 KIR2DL5BA0A0G2JN68 375 aa8.95□□□□□ -0.98
USF1-208ENST00000528768 KIR2DL5BA0A0G2JPC4 375 aa8.95□□□□□ -0.98
USF1-208ENST00000528768 IGHV7-4-1A0A0J9YVY3 117 aa8.95□□□□□ -0.98
USF1-208ENST00000528768 FAM181BA6NEQ2 426 aa8.95□□□□□ -0.98
USF1-208ENST00000528768 IGHV3-11P01762 117 aa8.95□□□□□ -0.98
USF1-208ENST00000528768 BTF3P20290 206 aaKnown RBP8.95□□□□□ -0.98
USF1-208ENST00000528768 ID1P41134 155 aa8.95□□□□□ -0.98
USF1-208ENST00000528768 CFHR3Q02985 330 aa8.95□□□□□ -0.98
USF1-208ENST00000528768 ERCC8Q13216 396 aa8.95□□□□□ -0.98
USF1-208ENST00000528768 TWIST1Q15672 202 aa8.95□□□□□ -0.98
USF1-208ENST00000528768 KPRPQ5T749 579 aaPredicted RBP8.95□□□□□ -0.98
USF1-208ENST00000528768 FA2HQ7L5A8 372 aa8.95□□□□□ -0.98
USF1-208ENST00000528768 KIR2DL5AQ8N109 375 aa8.95□□□□□ -0.98
USF1-208ENST00000528768 TMEM86BQ8N661 226 aa8.95□□□□□ -0.98
USF1-208ENST00000528768 PRSS3P2Q8NHM4 247 aa8.95□□□□□ -0.98
USF1-208ENST00000528768 C20orf144Q9BQM9 153 aa8.95□□□□□ -0.98
USF1-208ENST00000528768 AGPAT4-IT1Q9H0P7 198 aa8.95□□□□□ -0.98
USF1-208ENST00000528768 DAZ1Q9NQZ3 744 aaKnown RBP8.95□□□□□ -0.98
USF1-208ENST00000528768 HSPB8Q9UJY1 196 aa8.95□□□□□ -0.98
USF1-208ENST00000528768 VPREB3Q9UKI3 123 aa8.95□□□□□ -0.98
USF1-208ENST00000528768 RYR3Q15413 4870 aa8.94□□□□□ -0.98
USF1-208ENST00000528768 TRAV8-2A0A0B4J237 113 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms