RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 SPINK8P0C7L1 97 aa14.17□□□□□ -0.14
LTBP3-210ENST00000528516 SEM1Q6ZVN7 128 aa14.17□□□□□ -0.14
LTBP3-210ENST00000528516 PRSS22Q9GZN4 317 aa14.17□□□□□ -0.14
LTBP3-210ENST00000528516 TRAV40A0A0B4J280 105 aa14.16□□□□□ -0.14
LTBP3-210ENST00000528516 TMEM30BQ3MIR4 351 aa14.16□□□□□ -0.14
LTBP3-210ENST00000528516 NCKAP5O14513 1909 aa14.16□□□□□ -0.14
LTBP3-210ENST00000528516 F8W1H4 67 aa14.16□□□□□ -0.14
LTBP3-210ENST00000528516 SIVA1O15304 175 aa14.16□□□□□ -0.14
LTBP3-210ENST00000528516 ZNF256Q9Y2P7 627 aaPredicted RBP14.16□□□□□ -0.14
LTBP3-210ENST00000528516 C19orf71A6NCJ1 209 aa14.15□□□□□ -0.14
LTBP3-210ENST00000528516 HLA-DMBP28068 263 aa14.15□□□□□ -0.14
LTBP3-210ENST00000528516 RNASE4P34096 147 aaKnown RBP14.15□□□□□ -0.14
LTBP3-210ENST00000528516 ZNF418Q8TF45 676 aaPredicted RBP14.15□□□□□ -0.14
LTBP3-210ENST00000528516 MLST8Q9BVC4 326 aa14.15□□□□□ -0.14
LTBP3-210ENST00000528516 BEX4Q9NWD9 120 aaPredicted RBP14.15□□□□□ -0.14
LTBP3-210ENST00000528516 KLRB1Q12918 225 aa14.15□□□□□ -0.14
LTBP3-210ENST00000528516 C8orf49Q96NF6 230 aa14.15□□□□□ -0.14
LTBP3-210ENST00000528516 ADAMTS20P59510 1910 aa14.14□□□□□ -0.15
LTBP3-210ENST00000528516 EMP1P54849 157 aa14.14□□□□□ -0.15
LTBP3-210ENST00000528516 SPRY4Q9C004 299 aa14.14□□□□□ -0.15
LTBP3-210ENST00000528516 SPANXB1Q9NS25 103 aaPredicted RBP14.14□□□□□ -0.15
LTBP3-210ENST00000528516 ZC2HC1BQ5TFG8 222 aa14.14□□□□□ -0.15
LTBP3-210ENST00000528516 SYT8Q8NBV8 401 aa14.14□□□□□ -0.15
LTBP3-210ENST00000528516 Q71RC1 249 aaPredicted RBP14.14□□□□□ -0.15
LTBP3-210ENST00000528516 VMO1Q7Z5L0 202 aa14.14□□□□□ -0.15
LTBP3-210ENST00000528516 FABP5P3A8MUU1 101 aa14.13□□□□□ -0.15
LTBP3-210ENST00000528516 TTC9CQ8N5M4 171 aa14.13□□□□□ -0.15
LTBP3-210ENST00000528516 IGKV3OR2-268A0A0C4DH90 116 aa14.13□□□□□ -0.15
LTBP3-210ENST00000528516 INSL3P51460 131 aa14.13□□□□□ -0.15
LTBP3-210ENST00000528516 TCF15Q12870 199 aa14.13□□□□□ -0.15
LTBP3-210ENST00000528516 TMEM170BQ5T4T1 132 aa14.13□□□□□ -0.15
LTBP3-210ENST00000528516 VKORC1Q9BQB6 163 aa14.13□□□□□ -0.15
LTBP3-210ENST00000528516 C20orf78Q9BR46 151 aa14.13□□□□□ -0.15
LTBP3-210ENST00000528516 KLF12Q9Y4X4 402 aa14.13□□□□□ -0.15
LTBP3-210ENST00000528516 THBDP07204 575 aa14.12□□□□□ -0.15
LTBP3-210ENST00000528516 C5orf64Q2M2E5 130 aa14.12□□□□□ -0.15
LTBP3-210ENST00000528516 ZNF56Q15929 161 aa14.12□□□□□ -0.15
LTBP3-210ENST00000528516 EEF1AKMT3Q96AZ1 226 aa14.12□□□□□ -0.15
LTBP3-210ENST00000528516 MRPL16Q9NX20 251 aaKnown RBP14.12□□□□□ -0.15
LTBP3-210ENST00000528516 CFAP47Q6ZTR5 3102 aa14.12□□□□□ -0.15
LTBP3-210ENST00000528516 TMEM155Q4W5P6 130 aa14.12□□□□□ -0.15
LTBP3-210ENST00000528516 SS18L2Q9UHA2 77 aa14.12□□□□□ -0.15
LTBP3-210ENST00000528516 DMXL1Q9Y485 3027 aa14.11□□□□□ -0.15
LTBP3-210ENST00000528516 BPESC1Q9GZL8 116 aa14.11□□□□□ -0.15
LTBP3-210ENST00000528516 TNRC6BQ9UPQ9 1833 aaKnown RBP14.11□□□□□ -0.15
LTBP3-210ENST00000528516 FOXI2Q6ZQN5 318 aa14.11□□□□□ -0.15
LTBP3-210ENST00000528516 PRSS33Q8NF86 280 aa14.11□□□□□ -0.15
LTBP3-210ENST00000528516 TRBV25-1A0A075B6N4 114 aa14.11□□□□□ -0.15
LTBP3-210ENST00000528516 IGKV2D-26A0A0A0MRZ7 120 aa14.11□□□□□ -0.15
LTBP3-210ENST00000528516 IGLL5B9A064 214 aa14.11□□□□□ -0.15
LTBP3-210ENST00000528516 IGKCP01834 107 aa14.11□□□□□ -0.15
LTBP3-210ENST00000528516 CYSLTR1Q9Y271 337 aa14.11□□□□□ -0.15
LTBP3-210ENST00000528516 LOC400499M0QZD8 3231 aa14.11□□□□□ -0.15
LTBP3-210ENST00000528516 ZNF462Q96JM2 2506 aa14.1□□□□□ -0.15
LTBP3-210ENST00000528516 IGHV3-64A0A075B6Q5 118 aa14.1□□□□□ -0.15
LTBP3-210ENST00000528516 TRGV9Q99603 122 aa14.1□□□□□ -0.15
LTBP3-210ENST00000528516 SMPXQ9UHP9 88 aa14.1□□□□□ -0.15
LTBP3-210ENST00000528516 A0A1B0GW15 77 aa14.09□□□□□ -0.15
LTBP3-210ENST00000528516 NPYP01303 97 aa14.09□□□□□ -0.15
LTBP3-210ENST00000528516 CEND1Q8N111 149 aa14.09□□□□□ -0.15
LTBP3-210ENST00000528516 ANAPC13Q9BS18 74 aa14.09□□□□□ -0.15
LTBP3-210ENST00000528516 RUSC1-AS1Q66K80 236 aa14.09□□□□□ -0.15
LTBP3-210ENST00000528516 FAM159AQ6UWV7 190 aa14.09□□□□□ -0.15
LTBP3-210ENST00000528516 IGKV3D-20A0A0C4DH25 116 aa14.09□□□□□ -0.15
LTBP3-210ENST00000528516 SH2D1AO60880 128 aa14.09□□□□□ -0.15
LTBP3-210ENST00000528516 POU2AF1Q16633 256 aa14.09□□□□□ -0.15
LTBP3-210ENST00000528516 MRPL51Q4U2R6 128 aaKnown RBP14.09□□□□□ -0.15
LTBP3-210ENST00000528516 FAM104BQ5XKR9 115 aa14.09□□□□□ -0.15
LTBP3-210ENST00000528516 PIP4P1Q86T03 277 aa14.09□□□□□ -0.15
LTBP3-210ENST00000528516 SCGB3A1Q96QR1 104 aa14.08□□□□□ -0.16
LTBP3-210ENST00000528516 SRSF8Q9BRL6 282 aaKnown RBP14.08□□□□□ -0.16
LTBP3-210ENST00000528516 DSCAMO60469 2012 aa14.08□□□□□ -0.16
LTBP3-210ENST00000528516 IGKV1D-37A0A075B6S9 117 aa14.08□□□□□ -0.16
LTBP3-210ENST00000528516 OR11H12B2RN74 326 aa14.08□□□□□ -0.16
LTBP3-210ENST00000528516 PVRIGQ6DKI7 326 aa14.08□□□□□ -0.16
LTBP3-210ENST00000528516 OR11H1Q8NG94 326 aa14.08□□□□□ -0.16
LTBP3-210ENST00000528516 OR11H2Q8NH07 326 aa14.08□□□□□ -0.16
LTBP3-210ENST00000528516 DPM2O94777 84 aa14.07□□□□□ -0.16
LTBP3-210ENST00000528516 MYCNOSP40205 109 aa14.07□□□□□ -0.16
LTBP3-210ENST00000528516 C12orf74Q32Q52 190 aa14.07□□□□□ -0.16
LTBP3-210ENST00000528516 Q6AWC8 147 aa14.07□□□□□ -0.16
LTBP3-210ENST00000528516 ASPMQ8IZT6 3477 aa14.07□□□□□ -0.16
LTBP3-210ENST00000528516 A0A096LNJ9 63 aa14.07□□□□□ -0.16
LTBP3-210ENST00000528516 UCNP55089 124 aa14.07□□□□□ -0.16
LTBP3-210ENST00000528516 A0A1W2PRX2 142 aa14.06□□□□□ -0.16
LTBP3-210ENST00000528516 SAA4P35542 130 aa14.06□□□□□ -0.16
LTBP3-210ENST00000528516 ZNF833PQ6ZTB9 187 aa14.06□□□□□ -0.16
LTBP3-210ENST00000528516 A0A0U1RRA0 63 aa14.06□□□□□ -0.16
LTBP3-210ENST00000528516 DYNLRB2Q8TF09 96 aa14.06□□□□□ -0.16
LTBP3-210ENST00000528516 TMEM8BA6NDV4 472 aa14.06□□□□□ -0.16
LTBP3-210ENST00000528516 GATA4P43694 442 aa14.06□□□□□ -0.16
LTBP3-210ENST00000528516 NUP37Q8NFH4 326 aa14.06□□□□□ -0.16
LTBP3-210ENST00000528516 IGHV3-73A0A0B4J1V6 119 aa14.05□□□□□ -0.16
LTBP3-210ENST00000528516 CD7P09564 240 aa14.05□□□□□ -0.16
LTBP3-210ENST00000528516 ZNF688P0C7X2 276 aa14.05□□□□□ -0.16
LTBP3-210ENST00000528516 GP9P14770 177 aa14.05□□□□□ -0.16
LTBP3-210ENST00000528516 C8orf86Q6ZUL3 223 aa14.05□□□□□ -0.16
LTBP3-210ENST00000528516 SPATA25Q9BR10 227 aa14.05□□□□□ -0.16
LTBP3-210ENST00000528516 TRAV26-2A0A0B4J265 109 aa14.05□□□□□ -0.16
LTBP3-210ENST00000528516 TCTEX1D4Q5JR98 221 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms