RNA–Protein interactions for RNA: ENST00000528455.5

CD44-228, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 687 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-228ENST00000528455 GOLT1AQ6ZVE7 132 aa5.46□□□□□ -1.54
CD44-228ENST00000528455 COX8CQ7Z4L0 72 aa5.46□□□□□ -1.54
CD44-228ENST00000528455 SLC7A5P1Q8MH63 180 aa5.46□□□□□ -1.54
CD44-228ENST00000528455 SMIM12Q96EX1 92 aa5.46□□□□□ -1.54
CD44-228ENST00000528455 LINC00479Q96M42 142 aa5.46□□□□□ -1.54
CD44-228ENST00000528455 ODF3Q96PU9 254 aa5.46□□□□□ -1.54
CD44-228ENST00000528455 KRTAP4-7Q9BYR0 210 aa5.46□□□□□ -1.54
CD44-228ENST00000528455 ZNF492Q9P255 531 aa5.46□□□□□ -1.54
CD44-228ENST00000528455 PSG8Q9UQ74 426 aa5.46□□□□□ -1.54
CD44-228ENST00000528455 AGRNO00468 2067 aa5.46□□□□□ -1.54
CD44-228ENST00000528455 ZNF727A8MUV8 499 aa5.45□□□□□ -1.54
CD44-228ENST00000528455 A8MZ25 164 aa5.45□□□□□ -1.54
CD44-228ENST00000528455 C9JCJ5 164 aa5.45□□□□□ -1.54
CD44-228ENST00000528455 CT45A10P0DMU9 189 aa5.45□□□□□ -1.54
CD44-228ENST00000528455 HLA-DRB4P13762 266 aa5.45□□□□□ -1.54
CD44-228ENST00000528455 TSPOP30536 169 aa5.45□□□□□ -1.54
CD44-228ENST00000528455 RPL35P42766 123 aaKnown RBP5.45□□□□□ -1.54
CD44-228ENST00000528455 KRTAP10-11P60412 298 aa5.45□□□□□ -1.54
CD44-228ENST00000528455 NUTF2P61970 127 aaKnown RBP5.45□□□□□ -1.54
CD44-228ENST00000528455 UBE2G1P62253 170 aa5.45□□□□□ -1.54
CD44-228ENST00000528455 GNG5P63218 68 aa5.45□□□□□ -1.54
CD44-228ENST00000528455 TMEM241Q24JQ0 296 aa5.45□□□□□ -1.54
CD44-228ENST00000528455 C10orf91Q5T1B1 145 aa5.45□□□□□ -1.54
CD44-228ENST00000528455 LCE5AQ5TCM9 118 aa5.45□□□□□ -1.54
CD44-228ENST00000528455 GDF5OSQ5U4N7 250 aa5.45□□□□□ -1.54
CD44-228ENST00000528455 BAGE2Q86Y30 109 aa5.45□□□□□ -1.54
CD44-228ENST00000528455 APRG1Q8IVJ8 170 aa5.45□□□□□ -1.54
CD44-228ENST00000528455 STHQ8IWL8 128 aa5.45□□□□□ -1.54
CD44-228ENST00000528455 FAM19A4Q96LR4 140 aa5.45□□□□□ -1.54
CD44-228ENST00000528455 PRR25Q96S07 402 aa5.45□□□□□ -1.54
CD44-228ENST00000528455 VGLL1Q99990 258 aa5.45□□□□□ -1.54
CD44-228ENST00000528455 SEC11CQ9BY50 192 aa5.45□□□□□ -1.54
CD44-228ENST00000528455 PARLQ9H300 379 aa5.45□□□□□ -1.54
CD44-228ENST00000528455 LY96Q9Y6Y9 160 aa5.45□□□□□ -1.54
CD44-228ENST00000528455 HLA-DRB4X5D2U9 266 aa5.45□□□□□ -1.54
CD44-228ENST00000528455 IGKV2-40A0A087WW87 121 aaPredicted RBP5.44□□□□□ -1.54
CD44-228ENST00000528455 TRAV34A0A0B4J273 112 aa5.44□□□□□ -1.54
CD44-228ENST00000528455 KRBOX1C9JBD0 128 aa5.44□□□□□ -1.54
CD44-228ENST00000528455 F6UB75 175 aa5.44□□□□□ -1.54
CD44-228ENST00000528455 LTAP01374 205 aa5.44□□□□□ -1.54
CD44-228ENST00000528455 IGKV2D-40P01614 121 aaPredicted RBP5.44□□□□□ -1.54
CD44-228ENST00000528455 AMBPP02760 352 aa5.44□□□□□ -1.54
CD44-228ENST00000528455 SFTA3P0C7M3 94 aa5.44□□□□□ -1.54
CD44-228ENST00000528455 ZNF705DP0CH99 300 aaPredicted RBP5.44□□□□□ -1.54
CD44-228ENST00000528455 ZNF705BP0CI00 300 aaPredicted RBP5.44□□□□□ -1.54
CD44-228ENST00000528455 AKR1C3P42330 323 aa5.44□□□□□ -1.54
CD44-228ENST00000528455 HIST1H1AQ02539 215 aaPredicted RBP5.44□□□□□ -1.54
CD44-228ENST00000528455 ERCC8Q13216 396 aa5.44□□□□□ -1.54
CD44-228ENST00000528455 DEFB121Q5J5C9 76 aa5.44□□□□□ -1.54
CD44-228ENST00000528455 ACTL10Q5JWF8 245 aa5.44□□□□□ -1.54
CD44-228ENST00000528455 PRNTQ86SH4 94 aa5.44□□□□□ -1.54
CD44-228ENST00000528455 TMEM183AQ8IXX5 376 aa5.44□□□□□ -1.54
CD44-228ENST00000528455 OCC1Q8TAD7 63 aa5.44□□□□□ -1.54
CD44-228ENST00000528455 SMIM7Q9BQ49 75 aa5.44□□□□□ -1.54
CD44-228ENST00000528455 NDFIP1Q9BT67 221 aa5.44□□□□□ -1.54
CD44-228ENST00000528455 BIN3Q9NQY0 253 aa5.44□□□□□ -1.54
CD44-228ENST00000528455 RPH3ALQ9UNE2 315 aa5.44□□□□□ -1.54
CD44-228ENST00000528455 TRAV8-1A0A0A6YYK1 113 aa5.43□□□□□ -1.54
CD44-228ENST00000528455 KNCNA6PVL3 124 aa5.43□□□□□ -1.54
CD44-228ENST00000528455 FABP5P3A8MUU1 101 aa5.43□□□□□ -1.54
CD44-228ENST00000528455 F8W036 122 aa5.43□□□□□ -1.54
CD44-228ENST00000528455 CRISP2P16562 243 aa5.43□□□□□ -1.54
CD44-228ENST00000528455 GNG4P50150 75 aa5.43□□□□□ -1.54
CD44-228ENST00000528455 CEBPGP53567 150 aa5.43□□□□□ -1.54
CD44-228ENST00000528455 DEFB1P60022 68 aa5.43□□□□□ -1.54
CD44-228ENST00000528455 MORN3Q6PF18 240 aaPredicted RBP5.43□□□□□ -1.54
CD44-228ENST00000528455 AMTNQ6UX39 209 aa5.43□□□□□ -1.54
CD44-228ENST00000528455 LINC00322Q6ZN03 302 aaPredicted RBP5.43□□□□□ -1.54
CD44-228ENST00000528455 TRPT1Q86TN4 253 aaKnown RBP5.43□□□□□ -1.54
CD44-228ENST00000528455 DEFB125Q8N687 156 aa5.43□□□□□ -1.54
CD44-228ENST00000528455 OR4B1Q8NGF8 309 aa5.43□□□□□ -1.54
CD44-228ENST00000528455 TVP23CQ96ET8 276 aa5.43□□□□□ -1.54
CD44-228ENST00000528455 NIPSNAP3BQ9BS92 247 aa5.43□□□□□ -1.54
CD44-228ENST00000528455 DERL1Q9BUN8 251 aa5.43□□□□□ -1.54
CD44-228ENST00000528455 KRTAP4-9Q9BYQ8 210 aa5.43□□□□□ -1.54
CD44-228ENST00000528455 SDF2L1Q9HCN8 221 aa5.43□□□□□ -1.54
CD44-228ENST00000528455 NAT8Q9UHE5 227 aa5.43□□□□□ -1.54
CD44-228ENST00000528455 TRGV11A0A075B6L2 103 aa5.42□□□□□ -1.54
CD44-228ENST00000528455 A0A087WWL8 130 aa5.42□□□□□ -1.54
CD44-228ENST00000528455 KIR2DL5BA0A0G2JN68 375 aa5.42□□□□□ -1.54
CD44-228ENST00000528455 KIR2DL5BA0A0G2JPC4 375 aa5.42□□□□□ -1.54
CD44-228ENST00000528455 KLLNB2CW77 178 aa5.42□□□□□ -1.54
CD44-228ENST00000528455 B4DEV8 164 aa5.42□□□□□ -1.54
CD44-228ENST00000528455 K7EIL1 84 aa5.42□□□□□ -1.54
CD44-228ENST00000528455 UBE2CO00762 179 aa5.42□□□□□ -1.54
CD44-228ENST00000528455 GCGP01275 180 aa5.42□□□□□ -1.54
CD44-228ENST00000528455 IGLV2-8P01709 118 aa5.42□□□□□ -1.54
CD44-228ENST00000528455 GPX1P07203 203 aa5.42□□□□□ -1.54
CD44-228ENST00000528455 LEPP41159 167 aa5.42□□□□□ -1.54
CD44-228ENST00000528455 CDKN1BP46527 198 aa5.42□□□□□ -1.54
CD44-228ENST00000528455 PNRC1Q12796 327 aaPredicted RBP5.42□□□□□ -1.54
CD44-228ENST00000528455 ZNF674Q2M3X9 581 aa5.42□□□□□ -1.54
CD44-228ENST00000528455 SMUG1Q53HV7 270 aa5.42□□□□□ -1.54
CD44-228ENST00000528455 KIR2DL5AQ8N109 375 aa5.42□□□□□ -1.54
CD44-228ENST00000528455 KIR2DL5BQ8NHK3 375 aa5.42□□□□□ -1.54
CD44-228ENST00000528455 SGK494Q96LW2 274 aa5.42□□□□□ -1.54
CD44-228ENST00000528455 IGF2BP2-AS1Q96M15 143 aa5.42□□□□□ -1.54
CD44-228ENST00000528455 ASCL2Q99929 193 aa5.42□□□□□ -1.54
CD44-228ENST00000528455 C1QTNF4Q9BXJ3 329 aa5.42□□□□□ -1.54
CD44-228ENST00000528455 CSTL1Q9H114 145 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 762.3 ms