RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 STOML3Q8TAV4 291 aa6.46□□□□□ -1.38
CMTM1-210ENST00000528441 FAM210BQ96KR6 192 aa6.46□□□□□ -1.38
CMTM1-210ENST00000528441 FAM210AQ96ND0 272 aa6.46□□□□□ -1.38
CMTM1-210ENST00000528441 PYGO2Q9BRQ0 406 aa6.46□□□□□ -1.38
CMTM1-210ENST00000528441 Q9H3A6 140 aa6.46□□□□□ -1.38
CMTM1-210ENST00000528441 DNAH1Q9P2D7 4330 aa6.45□□□□□ -1.38
CMTM1-210ENST00000528441 TRGV2A0A075B6R0 118 aa6.45□□□□□ -1.38
CMTM1-210ENST00000528441 BORCS7-ASMTA0A0B4J1R7 106 aa6.45□□□□□ -1.38
CMTM1-210ENST00000528441 NDUFB4O95168 129 aa6.45□□□□□ -1.38
CMTM1-210ENST00000528441 M6PRP20645 277 aa6.45□□□□□ -1.38
CMTM1-210ENST00000528441 CDC34P49427 236 aaPredicted RBP6.45□□□□□ -1.38
CMTM1-210ENST00000528441 RAB2AP61019 212 aa6.45□□□□□ -1.38
CMTM1-210ENST00000528441 CDPF1Q6NVV7 123 aa6.45□□□□□ -1.38
CMTM1-210ENST00000528441 POM121L12Q8N7R1 296 aa6.45□□□□□ -1.38
CMTM1-210ENST00000528441 Q8TAT8 98 aa6.45□□□□□ -1.38
CMTM1-210ENST00000528441 ODF3Q96PU9 254 aa6.45□□□□□ -1.38
CMTM1-210ENST00000528441 NAGKQ9UJ70 344 aa6.45□□□□□ -1.38
CMTM1-210ENST00000528441 TRGV1A0A0A0MS02 117 aa6.44□□□□□ -1.38
CMTM1-210ENST00000528441 A0A0J9YY99 117 aa6.44□□□□□ -1.38
CMTM1-210ENST00000528441 PGPA6NDG6 321 aa6.44□□□□□ -1.38
CMTM1-210ENST00000528441 ARPC5O15511 151 aa6.44□□□□□ -1.38
CMTM1-210ENST00000528441 BCL2L11O43521 198 aa6.44□□□□□ -1.38
CMTM1-210ENST00000528441 ZNF138P52744 262 aa6.44□□□□□ -1.38
CMTM1-210ENST00000528441 EIF5AP63241 154 aaKnown RBP6.44□□□□□ -1.38
CMTM1-210ENST00000528441 EIF4E3Q8N5X7 224 aaKnown RBP6.44□□□□□ -1.38
CMTM1-210ENST00000528441 RXFP4Q8TDU9 374 aa6.44□□□□□ -1.38
CMTM1-210ENST00000528441 FXYD5Q96DB9 178 aa6.44□□□□□ -1.38
CMTM1-210ENST00000528441 FAM167A-AS1Q96KT0 104 aa6.44□□□□□ -1.38
CMTM1-210ENST00000528441 VGLL1Q99990 258 aa6.44□□□□□ -1.38
CMTM1-210ENST00000528441 NDFIP1Q9BT67 221 aa6.44□□□□□ -1.38
CMTM1-210ENST00000528441 AGPAT4-IT1Q9H0P7 198 aa6.44□□□□□ -1.38
CMTM1-210ENST00000528441 KRTAP9-6A0A140TA67 174 aa6.43□□□□□ -1.38
CMTM1-210ENST00000528441 MBP02144 154 aa6.43□□□□□ -1.38
CMTM1-210ENST00000528441 CCL18P55774 89 aa6.43□□□□□ -1.38
CMTM1-210ENST00000528441 ZNF415Q09FC8 603 aa6.43□□□□□ -1.38
CMTM1-210ENST00000528441 SOHLH1Q5JUK2 328 aa6.43□□□□□ -1.38
CMTM1-210ENST00000528441 MUC21Q5SSG8 566 aa6.43□□□□□ -1.38
CMTM1-210ENST00000528441 PQLC2Q6ZP29 291 aa6.43□□□□□ -1.38
CMTM1-210ENST00000528441 RNASE8Q8TDE3 154 aaKnown RBP6.43□□□□□ -1.38
CMTM1-210ENST00000528441 GNPNAT1Q96EK6 184 aaPredicted RBP6.43□□□□□ -1.38
CMTM1-210ENST00000528441 WFDC1Q9HC57 220 aa6.43□□□□□ -1.38
CMTM1-210ENST00000528441 GSN-AS1Q9NRJ2 163 aa6.43□□□□□ -1.38
CMTM1-210ENST00000528441 IGHV1OR15-1A0A075B7D0 117 aa6.42□□□□□ -1.38
CMTM1-210ENST00000528441 KANTRA0A1W2PQU2 76 aa6.42□□□□□ -1.38
CMTM1-210ENST00000528441 K7EQM0 130 aa6.42□□□□□ -1.38
CMTM1-210ENST00000528441 ATP6V1G1O75348 118 aa6.42□□□□□ -1.38
CMTM1-210ENST00000528441 RAB14P61106 215 aa6.42□□□□□ -1.38
CMTM1-210ENST00000528441 FAM159AQ6UWV7 190 aa6.42□□□□□ -1.38
CMTM1-210ENST00000528441 C9orf47Q6ZRZ4 202 aa6.42□□□□□ -1.38
CMTM1-210ENST00000528441 GOLT1AQ6ZVE7 132 aa6.42□□□□□ -1.38
CMTM1-210ENST00000528441 LYPD1Q8N2G4 141 aa6.42□□□□□ -1.38
CMTM1-210ENST00000528441 ACTR3CQ9C0K3 210 aaPredicted RBP6.42□□□□□ -1.38
CMTM1-210ENST00000528441 OTORQ9NRC9 128 aa6.42□□□□□ -1.38
CMTM1-210ENST00000528441 CYTL1Q9NRR1 136 aa6.42□□□□□ -1.38
CMTM1-210ENST00000528441 ZNF492Q9P255 531 aa6.42□□□□□ -1.38
CMTM1-210ENST00000528441 TRAV26-1A0A087WT03 109 aa6.41□□□□□ -1.38
CMTM1-210ENST00000528441 PLAC8L1A1L4L8 177 aa6.41□□□□□ -1.38
CMTM1-210ENST00000528441 IGHV3-53P01767 116 aa6.41□□□□□ -1.38
CMTM1-210ENST00000528441 ARL14EPLP0DKL9 152 aa6.41□□□□□ -1.38
CMTM1-210ENST00000528441 ATP6V0CP27449 155 aa6.41□□□□□ -1.38
CMTM1-210ENST00000528441 AKR1C8PQ5T2L2 129 aa6.41□□□□□ -1.38
CMTM1-210ENST00000528441 EIF5AL1Q6IS14 154 aaKnown RBP6.41□□□□□ -1.38
CMTM1-210ENST00000528441 SSX7Q7RTT5 188 aa6.41□□□□□ -1.38
CMTM1-210ENST00000528441 OR2G3Q8NGZ4 309 aa6.41□□□□□ -1.38
CMTM1-210ENST00000528441 TMPRSS5Q9H3S3 457 aa6.41□□□□□ -1.38
CMTM1-210ENST00000528441 TRGV11A0A075B6L2 103 aa6.4□□□□□ -1.38
CMTM1-210ENST00000528441 RBAKDNA6NC62 111 aa6.4□□□□□ -1.38
CMTM1-210ENST00000528441 KLLNB2CW77 178 aa6.4□□□□□ -1.38
CMTM1-210ENST00000528441 DIRC3C9JPN6 131 aa6.4□□□□□ -1.38
CMTM1-210ENST00000528441 F6UZH7 168 aa6.4□□□□□ -1.38
CMTM1-210ENST00000528441 TPT1P13693 172 aaKnown RBP6.4□□□□□ -1.38
CMTM1-210ENST00000528441 GNG5P63218 68 aa6.4□□□□□ -1.38
CMTM1-210ENST00000528441 TMEM183BQ1AE95 376 aa6.4□□□□□ -1.38
CMTM1-210ENST00000528441 RNF212Q495C1 297 aa6.4□□□□□ -1.38
CMTM1-210ENST00000528441 Q6ZTI0 123 aa6.4□□□□□ -1.38
CMTM1-210ENST00000528441 TMEM183AQ8IXX5 376 aa6.4□□□□□ -1.38
CMTM1-210ENST00000528441 SGK494Q96LW2 274 aa6.4□□□□□ -1.38
CMTM1-210ENST00000528441 PSMG3Q9BT73 122 aaPredicted RBP6.4□□□□□ -1.38
CMTM1-210ENST00000528441 SH3BGRL3Q9H299 93 aa6.4□□□□□ -1.38
CMTM1-210ENST00000528441 TMEM167BQ9NRX6 74 aa6.4□□□□□ -1.38
CMTM1-210ENST00000528441 MRPL16Q9NX20 251 aaKnown RBP6.4□□□□□ -1.38
CMTM1-210ENST00000528441 TRGV4A0A0C4DH28 118 aa6.39□□□□□ -1.39
CMTM1-210ENST00000528441 CXorf1O96002 111 aa6.39□□□□□ -1.39
CMTM1-210ENST00000528441 NMBP08949 121 aa6.39□□□□□ -1.39
CMTM1-210ENST00000528441 CRISP2P16562 243 aa6.39□□□□□ -1.39
CMTM1-210ENST00000528441 SERF2P84101 59 aa6.39□□□□□ -1.39
CMTM1-210ENST00000528441 PRR9Q5T870 116 aa6.39□□□□□ -1.39
CMTM1-210ENST00000528441 RPL7L1Q6DKI1 246 aaKnown RBP6.39□□□□□ -1.39
CMTM1-210ENST00000528441 LINC00336Q6ZUF6 198 aa6.39□□□□□ -1.39
CMTM1-210ENST00000528441 ZFAND2AQ8N6M9 145 aa6.39□□□□□ -1.39
CMTM1-210ENST00000528441 PCNPQ8WW12 178 aaKnown RBP6.39□□□□□ -1.39
CMTM1-210ENST00000528441 RAB24Q969Q5 203 aa6.39□□□□□ -1.39
CMTM1-210ENST00000528441 ZNF503Q96F45 646 aa6.39□□□□□ -1.39
CMTM1-210ENST00000528441 TREM1Q9NP99 234 aa6.39□□□□□ -1.39
CMTM1-210ENST00000528441 TP53TG3Q9ULZ0 132 aa6.39□□□□□ -1.39
CMTM1-210ENST00000528441 KLF12Q9Y4X4 402 aa6.39□□□□□ -1.39
CMTM1-210ENST00000528441 TRAV21A0A0B4J279 112 aa6.38□□□□□ -1.39
CMTM1-210ENST00000528441 PRSS29PA6NIE9 313 aa6.38□□□□□ -1.39
CMTM1-210ENST00000528441 SEC11BP0C7V7 166 aa6.38□□□□□ -1.39
CMTM1-210ENST00000528441 STAG3L2P0CL84 134 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms