RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 C10orf99Q6UWK7 81 aa11.17□□□□□ -0.62
ECHDC1-220ENST00000528402 SMIM15Q7Z3B0 74 aa11.17□□□□□ -0.62
ECHDC1-220ENST00000528402 ZNF575Q86XF7 245 aa11.17□□□□□ -0.62
ECHDC1-220ENST00000528402 ORMDL3Q8N138 153 aa11.17□□□□□ -0.62
ECHDC1-220ENST00000528402 KLHDC1Q8N7A1 406 aa11.17□□□□□ -0.62
ECHDC1-220ENST00000528402 DCANP1Q8TF63 244 aa11.17□□□□□ -0.62
ECHDC1-220ENST00000528402 ODF3Q96PU9 254 aa11.17□□□□□ -0.62
ECHDC1-220ENST00000528402 LAMTOR2Q9Y2Q5 125 aa11.17□□□□□ -0.62
ECHDC1-220ENST00000528402 DOPEY2Q9Y3R5 2298 aa11.16□□□□□ -0.62
ECHDC1-220ENST00000528402 IGHV4-4A0A075B6R2 117 aa11.16□□□□□ -0.62
ECHDC1-220ENST00000528402 MED14OSP0DP75 135 aa11.16□□□□□ -0.62
ECHDC1-220ENST00000528402 SNRPD3P62318 126 aaKnown RBP11.16□□□□□ -0.62
ECHDC1-220ENST00000528402 FBN2P35556 2912 aa11.15□□□□□ -0.62
ECHDC1-220ENST00000528402 CREBBPQ92793 2442 aa11.15□□□□□ -0.62
ECHDC1-220ENST00000528402 IGHV4OR15-8A0A075B7B6 117 aa11.15□□□□□ -0.62
ECHDC1-220ENST00000528402 A0A087WW49 117 aa11.15□□□□□ -0.62
ECHDC1-220ENST00000528402 SNAI2O43623 268 aa11.15□□□□□ -0.62
ECHDC1-220ENST00000528402 HOXD3P31249 432 aaPredicted RBP11.15□□□□□ -0.62
ECHDC1-220ENST00000528402 TEX43Q6ZNM6 134 aa11.15□□□□□ -0.62
ECHDC1-220ENST00000528402 ZNF664Q8N3J9 261 aa11.15□□□□□ -0.62
ECHDC1-220ENST00000528402 ZFAND2AQ8N6M9 145 aa11.15□□□□□ -0.62
ECHDC1-220ENST00000528402 C4orf3Q8WVX3 66 aa11.15□□□□□ -0.62
ECHDC1-220ENST00000528402 MS4A6AQ9H2W1 248 aa11.15□□□□□ -0.62
ECHDC1-220ENST00000528402 TMEM160Q9NX00 188 aa11.15□□□□□ -0.62
ECHDC1-220ENST00000528402 PEMTQ9UBM1 199 aa11.15□□□□□ -0.62
ECHDC1-220ENST00000528402 POLQO75417 2590 aa11.14□□□□□ -0.63
ECHDC1-220ENST00000528402 TRAV2A0A0B4J234 112 aa11.14□□□□□ -0.63
ECHDC1-220ENST00000528402 LINC00587B1AMM8 73 aa11.14□□□□□ -0.63
ECHDC1-220ENST00000528402 LINC01619G3V211 115 aa11.14□□□□□ -0.63
ECHDC1-220ENST00000528402 SYNJ2BPP57105 145 aa11.14□□□□□ -0.63
ECHDC1-220ENST00000528402 KRTDAPP60985 99 aa11.14□□□□□ -0.63
ECHDC1-220ENST00000528402 FAM19A2Q8N3H0 131 aa11.14□□□□□ -0.63
ECHDC1-220ENST00000528402 PRSS3P2Q8NHM4 247 aa11.14□□□□□ -0.63
ECHDC1-220ENST00000528402 PRELID3AQ96N28 172 aa11.14□□□□□ -0.63
ECHDC1-220ENST00000528402 CRYBG3Q68DQ2 2970 aa11.14□□□□□ -0.63
ECHDC1-220ENST00000528402 KMT2BQ9UMN6 2715 aaPredicted RBP11.13□□□□□ -0.63
ECHDC1-220ENST00000528402 FAM181BA6NEQ2 426 aa11.13□□□□□ -0.63
ECHDC1-220ENST00000528402 C2orf70A6NJV1 201 aa11.13□□□□□ -0.63
ECHDC1-220ENST00000528402 K7EQG2 157 aa11.13□□□□□ -0.63
ECHDC1-220ENST00000528402 PMCHL1Q16048 86 aa11.13□□□□□ -0.63
ECHDC1-220ENST00000528402 MRPL51Q4U2R6 128 aaKnown RBP11.13□□□□□ -0.63
ECHDC1-220ENST00000528402 FA2HQ7L5A8 372 aa11.13□□□□□ -0.63
ECHDC1-220ENST00000528402 DPF1Q92782 380 aa11.13□□□□□ -0.63
ECHDC1-220ENST00000528402 URB1-AS1Q96HZ7 61 aa11.13□□□□□ -0.63
ECHDC1-220ENST00000528402 DUSP14O95147 198 aaKnown RBP11.12□□□□□ -0.63
ECHDC1-220ENST00000528402 C3orf79P0CE67 100 aa11.12□□□□□ -0.63
ECHDC1-220ENST00000528402 BTF3P20290 206 aaKnown RBP11.12□□□□□ -0.63
ECHDC1-220ENST00000528402 DDTP30046 118 aa11.12□□□□□ -0.63
ECHDC1-220ENST00000528402 CKS2P33552 79 aa11.12□□□□□ -0.63
ECHDC1-220ENST00000528402 LEPP41159 167 aa11.12□□□□□ -0.63
ECHDC1-220ENST00000528402 AMN1Q8IY45 258 aa11.12□□□□□ -0.63
ECHDC1-220ENST00000528402 YAE1D1Q9NRH1 226 aa11.12□□□□□ -0.63
ECHDC1-220ENST00000528402 AP5S1Q9NUS5 200 aa11.12□□□□□ -0.63
ECHDC1-220ENST00000528402 C11orf21Q9P2W6 132 aa11.12□□□□□ -0.63
ECHDC1-220ENST00000528402 HSPB8Q9UJY1 196 aa11.12□□□□□ -0.63
ECHDC1-220ENST00000528402 IGKV3-7A0A075B6H7 116 aa11.11□□□□□ -0.63
ECHDC1-220ENST00000528402 DNAJC9-AS1A6NH13 148 aa11.11□□□□□ -0.63
ECHDC1-220ENST00000528402 D6R8Y8 96 aa11.11□□□□□ -0.63
ECHDC1-220ENST00000528402 HIST2H2BCQ6DN03 193 aa11.11□□□□□ -0.63
ECHDC1-220ENST00000528402 EBLN2Q6P2I7 272 aa11.11□□□□□ -0.63
ECHDC1-220ENST00000528402 Q6ZSV7 163 aa11.11□□□□□ -0.63
ECHDC1-220ENST00000528402 ABCA12Q86UK0 2595 aa11.11□□□□□ -0.63
ECHDC1-220ENST00000528402 KLLNB2CW77 178 aa11.1□□□□□ -0.63
ECHDC1-220ENST00000528402 LEPROTL1O95214 131 aa11.1□□□□□ -0.63
ECHDC1-220ENST00000528402 TSPOP30536 169 aa11.1□□□□□ -0.63
ECHDC1-220ENST00000528402 ASIPP42127 132 aa11.1□□□□□ -0.63
ECHDC1-220ENST00000528402 DEFA6Q01524 100 aa11.1□□□□□ -0.63
ECHDC1-220ENST00000528402 OR1N2Q8NGR9 330 aa11.1□□□□□ -0.63
ECHDC1-220ENST00000528402 IGHV1-24A0A0C4DH33 117 aa11.09□□□□□ -0.63
ECHDC1-220ENST00000528402 KIR2DL5BA0A0G2JN68 375 aa11.09□□□□□ -0.63
ECHDC1-220ENST00000528402 KIR2DL5BA0A0G2JPC4 375 aa11.09□□□□□ -0.63
ECHDC1-220ENST00000528402 CRXO43186 299 aaPredicted RBP11.09□□□□□ -0.63
ECHDC1-220ENST00000528402 TCF21O43680 179 aa11.09□□□□□ -0.63
ECHDC1-220ENST00000528402 RNASE4P34096 147 aaKnown RBP11.09□□□□□ -0.63
ECHDC1-220ENST00000528402 KRTAP1-1Q07627 177 aa11.09□□□□□ -0.63
ECHDC1-220ENST00000528402 TCTEX1D4Q5JR98 221 aa11.09□□□□□ -0.63
ECHDC1-220ENST00000528402 SPANXN1Q5VSR9 72 aa11.09□□□□□ -0.63
ECHDC1-220ENST00000528402 WFDC3Q8IUB2 231 aa11.09□□□□□ -0.63
ECHDC1-220ENST00000528402 KIR2DL5AQ8N109 375 aa11.09□□□□□ -0.63
ECHDC1-220ENST00000528402 OR10AG1Q8NH19 301 aa11.09□□□□□ -0.63
ECHDC1-220ENST00000528402 C20orf144Q9BQM9 153 aa11.09□□□□□ -0.63
ECHDC1-220ENST00000528402 TMEM70Q9BUB7 260 aa11.09□□□□□ -0.63
ECHDC1-220ENST00000528402 VAMP8Q9BV40 100 aa11.09□□□□□ -0.63
ECHDC1-220ENST00000528402 PRO1933Q9H354 126 aa11.09□□□□□ -0.63
ECHDC1-220ENST00000528402 C16orf95Q9H693 158 aa11.09□□□□□ -0.63
ECHDC1-220ENST00000528402 A0A0J9YX75 114 aa11.09□□□□□ -0.63
ECHDC1-220ENST00000528402 C20orf202A1L168 122 aa11.09□□□□□ -0.63
ECHDC1-220ENST00000528402 RNASE1P07998 156 aaKnown RBP11.09□□□□□ -0.63
ECHDC1-220ENST00000528402 SRD5A1P18405 259 aa11.09□□□□□ -0.63
ECHDC1-220ENST00000528402 S100A4P26447 101 aaKnown RBP11.09□□□□□ -0.63
ECHDC1-220ENST00000528402 PRR9Q5T870 116 aa11.09□□□□□ -0.63
ECHDC1-220ENST00000528402 Q8N976 141 aa11.09□□□□□ -0.63
ECHDC1-220ENST00000528402 OR11H1Q8NG94 326 aa11.09□□□□□ -0.63
ECHDC1-220ENST00000528402 RNF185Q96GF1 192 aa11.09□□□□□ -0.63
ECHDC1-220ENST00000528402 DUX5Q96PT3 197 aa11.09□□□□□ -0.63
ECHDC1-220ENST00000528402 APCP25054 2843 aa11.08□□□□□ -0.63
ECHDC1-220ENST00000528402 VPS13CQ709C8 3753 aa11.08□□□□□ -0.63
ECHDC1-220ENST00000528402 CELSR2Q9HCU4 2923 aa11.08□□□□□ -0.64
ECHDC1-220ENST00000528402 PRSS47A8MTI9 375 aa11.08□□□□□ -0.64
ECHDC1-220ENST00000528402 CD33P20138 364 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms