RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 DNAH2Q9P225 4427 aa10.88□□□□□ -0.67
CAPN1-213ENST00000527897 HOXA5P20719 270 aa10.87□□□□□ -0.67
CAPN1-213ENST00000527897 GNG5P63218 68 aa10.87□□□□□ -0.67
CAPN1-213ENST00000527897 IQCF2Q8IXL9 164 aa10.87□□□□□ -0.67
CAPN1-213ENST00000527897 ASB13Q8WXK3 278 aa10.87□□□□□ -0.67
CAPN1-213ENST00000527897 LINC00467Q9BRT7 94 aa10.87□□□□□ -0.67
CAPN1-213ENST00000527897 PSMG3Q9BT73 122 aaPredicted RBP10.87□□□□□ -0.67
CAPN1-213ENST00000527897 NAGKQ9UJ70 344 aa10.87□□□□□ -0.67
CAPN1-213ENST00000527897 BORCS7-ASMTA0A0B4J1R7 106 aa10.86□□□□□ -0.67
CAPN1-213ENST00000527897 RNF222A6NCQ9 220 aa10.86□□□□□ -0.67
CAPN1-213ENST00000527897 CCL18P55774 89 aa10.86□□□□□ -0.67
CAPN1-213ENST00000527897 TCL1AP56279 114 aa10.86□□□□□ -0.67
CAPN1-213ENST00000527897 LGALS9BQ3B8N2 356 aa10.86□□□□□ -0.67
CAPN1-213ENST00000527897 RPL7L1Q6DKI1 246 aaKnown RBP10.86□□□□□ -0.67
CAPN1-213ENST00000527897 OR2G3Q8NGZ4 309 aa10.86□□□□□ -0.67
CAPN1-213ENST00000527897 RAB24Q969Q5 203 aa10.86□□□□□ -0.67
CAPN1-213ENST00000527897 MRPL16Q9NX20 251 aaKnown RBP10.86□□□□□ -0.67
CAPN1-213ENST00000527897 TRAV8-1A0A0A6YYK1 113 aa10.85□□□□□ -0.67
CAPN1-213ENST00000527897 TRBV7-9A0A0J9YWB2 115 aa10.85□□□□□ -0.67
CAPN1-213ENST00000527897 IGHV3-53P01767 116 aa10.85□□□□□ -0.67
CAPN1-213ENST00000527897 MBP02144 154 aa10.85□□□□□ -0.67
CAPN1-213ENST00000527897 STAG3L2P0CL84 134 aa10.85□□□□□ -0.67
CAPN1-213ENST00000527897 STAG3L3P0CL85 134 aa10.85□□□□□ -0.67
CAPN1-213ENST00000527897 ZNF415Q09FC8 603 aa10.85□□□□□ -0.67
CAPN1-213ENST00000527897 LINC00336Q6ZUF6 198 aa10.85□□□□□ -0.67
CAPN1-213ENST00000527897 SGK494Q96LW2 274 aa10.85□□□□□ -0.67
CAPN1-213ENST00000527897 TNFSF18Q9UNG2 199 aa10.85□□□□□ -0.67
CAPN1-213ENST00000527897 HECTD4Q9Y4D8 3996 aa10.85□□□□□ -0.67
CAPN1-213ENST00000527897 F6UZH7 168 aa10.84□□□□□ -0.67
CAPN1-213ENST00000527897 GCHFRP30047 84 aa10.84□□□□□ -0.67
CAPN1-213ENST00000527897 SERF2P84101 59 aa10.84□□□□□ -0.67
CAPN1-213ENST00000527897 IBA57Q5T440 356 aaKnown RBP10.84□□□□□ -0.67
CAPN1-213ENST00000527897 FAM159AQ6UWV7 190 aa10.84□□□□□ -0.67
CAPN1-213ENST00000527897 ACTR3CQ9C0K3 210 aaPredicted RBP10.84□□□□□ -0.67
CAPN1-213ENST00000527897 LINC00588Q9Y4M8 146 aa10.84□□□□□ -0.67
CAPN1-213ENST00000527897 LENEPQ9Y5L5 61 aa10.84□□□□□ -0.67
CAPN1-213ENST00000527897 PRSS29PA6NIE9 313 aa10.83□□□□□ -0.68
CAPN1-213ENST00000527897 RTL8CO15255 209 aa10.83□□□□□ -0.68
CAPN1-213ENST00000527897 SPINK4O60575 86 aa10.83□□□□□ -0.68
CAPN1-213ENST00000527897 FAM3BP58499 235 aaPredicted RBP10.83□□□□□ -0.68
CAPN1-213ENST00000527897 TMEM183BQ1AE95 376 aa10.83□□□□□ -0.68
CAPN1-213ENST00000527897 SSX7Q7RTT5 188 aa10.83□□□□□ -0.68
CAPN1-213ENST00000527897 TMEM183AQ8IXX5 376 aa10.83□□□□□ -0.68
CAPN1-213ENST00000527897 DNAH17Q9UFH2 4485 aa10.82□□□□□ -0.68
CAPN1-213ENST00000527897 SMLR1H3BR10 107 aa10.82□□□□□ -0.68
CAPN1-213ENST00000527897 ARPC5O15511 151 aa10.82□□□□□ -0.68
CAPN1-213ENST00000527897 CXorf1O96002 111 aa10.82□□□□□ -0.68
CAPN1-213ENST00000527897 Q6AWC8 147 aa10.82□□□□□ -0.68
CAPN1-213ENST00000527897 Q6ZR54 194 aa10.82□□□□□ -0.68
CAPN1-213ENST00000527897 ST6GAL2Q96JF0 529 aa10.82□□□□□ -0.68
CAPN1-213ENST00000527897 TREM1Q9NP99 234 aa10.82□□□□□ -0.68
CAPN1-213ENST00000527897 MDFICQ9P1T7 246 aa10.82□□□□□ -0.68
CAPN1-213ENST00000527897 FAT2Q9NYQ8 4349 aa10.82□□□□□ -0.68
CAPN1-213ENST00000527897 SOHLH1Q5JUK2 328 aa10.81□□□□□ -0.68
CAPN1-213ENST00000527897 C1orf134Q5TEV5 83 aa10.81□□□□□ -0.68
CAPN1-213ENST00000527897 ZNRF2Q8NHG8 242 aa10.81□□□□□ -0.68
CAPN1-213ENST00000527897 TMED6Q8WW62 240 aa10.81□□□□□ -0.68
CAPN1-213ENST00000527897 NDFIP1Q9BT67 221 aa10.81□□□□□ -0.68
CAPN1-213ENST00000527897 TMEM167BQ9NRX6 74 aa10.81□□□□□ -0.68
CAPN1-213ENST00000527897 MUC4Q99102 2169 aa10.8□□□□□ -0.68
CAPN1-213ENST00000527897 TRGV11A0A075B6L2 103 aa10.8□□□□□ -0.68
CAPN1-213ENST00000527897 TRAV21A0A0B4J279 112 aa10.8□□□□□ -0.68
CAPN1-213ENST00000527897 K7EQM0 130 aa10.8□□□□□ -0.68
CAPN1-213ENST00000527897 SUMO1P63165 101 aaKnown RBP10.8□□□□□ -0.68
CAPN1-213ENST00000527897 AKR1C8PQ5T2L2 129 aa10.8□□□□□ -0.68
CAPN1-213ENST00000527897 C5orf17Q8NAS9 161 aa10.8□□□□□ -0.68
CAPN1-213ENST00000527897 TVP23CQ96ET8 276 aa10.8□□□□□ -0.68
CAPN1-213ENST00000527897 G3V3Q6 166 aa10.79□□□□□ -0.68
CAPN1-213ENST00000527897 PAX4O43316 350 aa10.79□□□□□ -0.68
CAPN1-213ENST00000527897 TCRAP04437 139 aa10.79□□□□□ -0.68
CAPN1-213ENST00000527897 UBE2G2P60604 165 aa10.79□□□□□ -0.68
CAPN1-213ENST00000527897 ARL6IP6Q8N6S5 226 aa10.79□□□□□ -0.68
CAPN1-213ENST00000527897 VSIG2Q96IQ7 327 aa10.79□□□□□ -0.68
CAPN1-213ENST00000527897 NBDYA0A0U1RRE5 68 aa10.78□□□□□ -0.68
CAPN1-213ENST00000527897 CTXND1A0A1B0GTU2 59 aa10.78□□□□□ -0.68
CAPN1-213ENST00000527897 SERTM2A0A1B0GWG4 89 aa10.78□□□□□ -0.68
CAPN1-213ENST00000527897 GGTLC3B5MD39 225 aa10.78□□□□□ -0.68
CAPN1-213ENST00000527897 H3BNG1 76 aa10.78□□□□□ -0.68
CAPN1-213ENST00000527897 GNRH2O43555 120 aa10.78□□□□□ -0.68
CAPN1-213ENST00000527897 FGF8P55075 233 aaPredicted RBP10.78□□□□□ -0.68
CAPN1-213ENST00000527897 ZNF726P1Q15940 193 aa10.78□□□□□ -0.68
CAPN1-213ENST00000527897 ESRGQ1W209 222 aa10.78□□□□□ -0.68
CAPN1-213ENST00000527897 PRNTQ86SH4 94 aa10.78□□□□□ -0.68
CAPN1-213ENST00000527897 SUN5Q8TC36 379 aa10.78□□□□□ -0.68
CAPN1-213ENST00000527897 C18orf15Q96N68 181 aa10.78□□□□□ -0.68
CAPN1-213ENST00000527897 C8orf49Q96NF6 230 aa10.78□□□□□ -0.68
CAPN1-213ENST00000527897 PSG8Q9UQ74 426 aa10.78□□□□□ -0.68
CAPN1-213ENST00000527897 A0A096LPF7 62 aa10.77□□□□□ -0.69
CAPN1-213ENST00000527897 TRGV4A0A0C4DH28 118 aa10.77□□□□□ -0.69
CAPN1-213ENST00000527897 TAAR5O14804 337 aa10.77□□□□□ -0.69
CAPN1-213ENST00000527897 IFNA7P01567 189 aa10.77□□□□□ -0.69
CAPN1-213ENST00000527897 SFTA3P0C7M3 94 aa10.77□□□□□ -0.69
CAPN1-213ENST00000527897 SPXQ9BT56 116 aa10.77□□□□□ -0.69
CAPN1-213ENST00000527897 Q9H8V8 135 aa10.77□□□□□ -0.69
CAPN1-213ENST00000527897 SDF2L1Q9HCN8 221 aa10.77□□□□□ -0.69
CAPN1-213ENST00000527897 EPDR1Q9UM22 224 aa10.77□□□□□ -0.69
CAPN1-213ENST00000527897 FLI1Q01543 452 aaPredicted RBP10.76□□□□□ -0.69
CAPN1-213ENST00000527897 ZFP69Q49AA0 526 aa10.76□□□□□ -0.69
CAPN1-213ENST00000527897 CYB561D1Q8N8Q1 229 aa10.76□□□□□ -0.69
CAPN1-213ENST00000527897 PRO0255Q9UI72 69 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms