RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 C18orf15Q96N68 181 aa7.22□□□□□ -1.25
PRPF40B-204ENST00000527253 KRTAP1-5Q9BYS1 174 aa7.22□□□□□ -1.25
PRPF40B-204ENST00000527253 TRGV2A0A075B6R0 118 aa7.21□□□□□ -1.26
PRPF40B-204ENST00000527253 A0A096LPF7 62 aa7.21□□□□□ -1.26
PRPF40B-204ENST00000527253 TRBV7-9A0A0J9YWB2 115 aa7.21□□□□□ -1.26
PRPF40B-204ENST00000527253 H3BNG1 76 aa7.21□□□□□ -1.26
PRPF40B-204ENST00000527253 RGS13O14921 159 aa7.21□□□□□ -1.26
PRPF40B-204ENST00000527253 HMGB3O15347 200 aaKnown RBP7.21□□□□□ -1.26
PRPF40B-204ENST00000527253 KHDC3LQ587J8 217 aa7.21□□□□□ -1.26
PRPF40B-204ENST00000527253 MUC21Q5SSG8 566 aa7.21□□□□□ -1.26
PRPF40B-204ENST00000527253 IBA57Q5T440 356 aaKnown RBP7.21□□□□□ -1.26
PRPF40B-204ENST00000527253 ZNF575Q86XF7 245 aa7.21□□□□□ -1.26
PRPF40B-204ENST00000527253 TVP23CQ96ET8 276 aa7.21□□□□□ -1.26
PRPF40B-204ENST00000527253 HYLS1Q96M11 299 aa7.21□□□□□ -1.26
PRPF40B-204ENST00000527253 Q9H8V8 135 aa7.21□□□□□ -1.26
PRPF40B-204ENST00000527253 OTORQ9NRC9 128 aa7.21□□□□□ -1.26
PRPF40B-204ENST00000527253 MRPL16Q9NX20 251 aaKnown RBP7.21□□□□□ -1.26
PRPF40B-204ENST00000527253 MDFICQ9P1T7 246 aa7.21□□□□□ -1.26
PRPF40B-204ENST00000527253 PCLOQ9Y6V0 5065 aa7.21□□□□□ -1.26
PRPF40B-204ENST00000527253 RYR1P21817 5038 aa7.21□□□□□ -1.26
PRPF40B-204ENST00000527253 PGPA6NDG6 321 aa7.2□□□□□ -1.26
PRPF40B-204ENST00000527253 PTTG1O95997 202 aa7.2□□□□□ -1.26
PRPF40B-204ENST00000527253 IGHV3-53P01767 116 aa7.2□□□□□ -1.26
PRPF40B-204ENST00000527253 CSN1S1P47710 185 aa7.2□□□□□ -1.26
PRPF40B-204ENST00000527253 TAS2R45P59539 299 aa7.2□□□□□ -1.26
PRPF40B-204ENST00000527253 ACOT6Q3I5F7 207 aaPredicted RBP7.2□□□□□ -1.26
PRPF40B-204ENST00000527253 SOHLH1Q5JUK2 328 aa7.2□□□□□ -1.26
PRPF40B-204ENST00000527253 Q6AWC8 147 aa7.2□□□□□ -1.26
PRPF40B-204ENST00000527253 C6orf223Q8N319 242 aa7.2□□□□□ -1.26
PRPF40B-204ENST00000527253 GNG5P63218 68 aa7.19□□□□□ -1.26
PRPF40B-204ENST00000527253 HSD17B11Q8NBQ5 300 aa7.19□□□□□ -1.26
PRPF40B-204ENST00000527253 OR10G4Q8NGN3 311 aa7.19□□□□□ -1.26
PRPF40B-204ENST00000527253 OR10G9Q8NGN4 311 aa7.19□□□□□ -1.26
PRPF40B-204ENST00000527253 OR10G7Q8NGN6 311 aa7.19□□□□□ -1.26
PRPF40B-204ENST00000527253 ST6GAL2Q96JF0 529 aa7.19□□□□□ -1.26
PRPF40B-204ENST00000527253 AQP10Q96PS8 301 aa7.19□□□□□ -1.26
PRPF40B-204ENST00000527253 UPK3BQ9BT76 320 aa7.19□□□□□ -1.26
PRPF40B-204ENST00000527253 MED28Q9H204 178 aa7.19□□□□□ -1.26
PRPF40B-204ENST00000527253 RPH3ALQ9UNE2 315 aa7.19□□□□□ -1.26
PRPF40B-204ENST00000527253 MRPS16Q9Y3D3 137 aaKnown RBP7.19□□□□□ -1.26
PRPF40B-204ENST00000527253 TRAV8-1A0A0A6YYK1 113 aa7.18□□□□□ -1.26
PRPF40B-204ENST00000527253 A0A1W2PPV4 95 aa7.18□□□□□ -1.26
PRPF40B-204ENST00000527253 MED14OSP0DP75 135 aa7.18□□□□□ -1.26
PRPF40B-204ENST00000527253 FHL2Q14192 279 aa7.18□□□□□ -1.26
PRPF40B-204ENST00000527253 PQLC2Q6ZP29 291 aa7.18□□□□□ -1.26
PRPF40B-204ENST00000527253 GOLT1AQ6ZVE7 132 aa7.18□□□□□ -1.26
PRPF40B-204ENST00000527253 OR2G3Q8NGZ4 309 aa7.18□□□□□ -1.26
PRPF40B-204ENST00000527253 TMED6Q8WW62 240 aa7.18□□□□□ -1.26
PRPF40B-204ENST00000527253 ARPC5LQ9BPX5 153 aa7.18□□□□□ -1.26
PRPF40B-204ENST00000527253 SH3BGRL3Q9H299 93 aa7.18□□□□□ -1.26
PRPF40B-204ENST00000527253 LENEPQ9Y5L5 61 aa7.18□□□□□ -1.26
PRPF40B-204ENST00000527253 F6UZH7 168 aa7.17□□□□□ -1.26
PRPF40B-204ENST00000527253 PAX4O43316 350 aa7.17□□□□□ -1.26
PRPF40B-204ENST00000527253 GNRH2O43555 120 aa7.17□□□□□ -1.26
PRPF40B-204ENST00000527253 STAG3L2P0CL84 134 aa7.17□□□□□ -1.26
PRPF40B-204ENST00000527253 STAG3L3P0CL85 134 aa7.17□□□□□ -1.26
PRPF40B-204ENST00000527253 ARL14EPLP0DKL9 152 aa7.17□□□□□ -1.26
PRPF40B-204ENST00000527253 ATP6V0CP27449 155 aa7.17□□□□□ -1.26
PRPF40B-204ENST00000527253 CRYBA4P53673 196 aa7.17□□□□□ -1.26
PRPF40B-204ENST00000527253 ZNF415Q09FC8 603 aa7.17□□□□□ -1.26
PRPF40B-204ENST00000527253 TMEM183BQ1AE95 376 aa7.17□□□□□ -1.26
PRPF40B-204ENST00000527253 TMEM183AQ8IXX5 376 aa7.17□□□□□ -1.26
PRPF40B-204ENST00000527253 CMTM2Q8TAZ6 248 aa7.17□□□□□ -1.26
PRPF40B-204ENST00000527253 SUN5Q8TC36 379 aa7.17□□□□□ -1.26
PRPF40B-204ENST00000527253 RAB24Q969Q5 203 aa7.17□□□□□ -1.26
PRPF40B-204ENST00000527253 SGK494Q96LW2 274 aa7.17□□□□□ -1.26
PRPF40B-204ENST00000527253 C8orf49Q96NF6 230 aa7.17□□□□□ -1.26
PRPF40B-204ENST00000527253 RNF222A6NCQ9 220 aa7.16□□□□□ -1.26
PRPF40B-204ENST00000527253 G3V3Q6 166 aa7.16□□□□□ -1.26
PRPF40B-204ENST00000527253 GIPP09681 153 aaPredicted RBP7.16□□□□□ -1.26
PRPF40B-204ENST00000527253 SFTA3P0C7M3 94 aa7.16□□□□□ -1.26
PRPF40B-204ENST00000527253 GCHFRP30047 84 aa7.16□□□□□ -1.26
PRPF40B-204ENST00000527253 CDC34P49427 236 aaPredicted RBP7.16□□□□□ -1.26
PRPF40B-204ENST00000527253 TDRG1Q3Y452 100 aa7.16□□□□□ -1.26
PRPF40B-204ENST00000527253 ARL6IP6Q8N6S5 226 aa7.16□□□□□ -1.26
PRPF40B-204ENST00000527253 RASL10AQ92737 203 aa7.16□□□□□ -1.26
PRPF40B-204ENST00000527253 ZNF479Q96JC4 524 aa7.16□□□□□ -1.26
PRPF40B-204ENST00000527253 PSMG3Q9BT73 122 aaPredicted RBP7.16□□□□□ -1.26
PRPF40B-204ENST00000527253 IGHV3-16A0A0C4DH30 117 aa7.15□□□□□ -1.26
PRPF40B-204ENST00000527253 IGLV2-11P01706 119 aa7.15□□□□□ -1.26
PRPF40B-204ENST00000527253 ZNF80P51504 273 aaPredicted RBP7.15□□□□□ -1.26
PRPF40B-204ENST00000527253 FAM74A1Q5RGS3 127 aa7.15□□□□□ -1.26
PRPF40B-204ENST00000527253 RPL7L1Q6DKI1 246 aaKnown RBP7.15□□□□□ -1.26
PRPF40B-204ENST00000527253 LYPD5Q6UWN5 251 aa7.15□□□□□ -1.26
PRPF40B-204ENST00000527253 FAM159AQ6UWV7 190 aa7.15□□□□□ -1.26
PRPF40B-204ENST00000527253 TREM1Q9NP99 234 aa7.15□□□□□ -1.26
PRPF40B-204ENST00000527253 C11orf21Q9P2W6 132 aa7.15□□□□□ -1.26
PRPF40B-204ENST00000527253 PRO0255Q9UI72 69 aa7.15□□□□□ -1.26
PRPF40B-204ENST00000527253 NAGKQ9UJ70 344 aa7.15□□□□□ -1.26
PRPF40B-204ENST00000527253 HHLA3Q9XRX5 114 aa7.15□□□□□ -1.26
PRPF40B-204ENST00000527253 ICOSQ9Y6W8 199 aa7.15□□□□□ -1.26
PRPF40B-204ENST00000527253 ABCA13Q86UQ4 5058 aa7.15□□□□□ -1.27
PRPF40B-204ENST00000527253 TRGV11A0A075B6L2 103 aa7.14□□□□□ -1.27
PRPF40B-204ENST00000527253 A0A1W2PPQ1 181 aa7.14□□□□□ -1.27
PRPF40B-204ENST00000527253 GGTLC3B5MD39 225 aa7.14□□□□□ -1.27
PRPF40B-204ENST00000527253 TCRAP04437 139 aa7.14□□□□□ -1.27
PRPF40B-204ENST00000527253 TYMSP04818 313 aa7.14□□□□□ -1.27
PRPF40B-204ENST00000527253 SERF2P84101 59 aa7.14□□□□□ -1.27
PRPF40B-204ENST00000527253 ZNF726P1Q15940 193 aa7.14□□□□□ -1.27
PRPF40B-204ENST00000527253 IQCF2Q8IXL9 164 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms