RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 NAP1L6A6NFF2 107 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 CCL25O15444 150 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 MPC2O95563 127 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 NCR2O95944 276 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 APOC3P02656 99 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 PRB1P04280 392 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 CXCL8P10145 99 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 COX6A1P12074 109 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 ADCYAP1P18509 176 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 CSRP1P21291 193 aaKnown RBP0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 CBLN1P23435 193 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 RNASE4P34096 147 aaKnown RBP0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 EDDM3BP56851 147 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 QRFPP83859 136 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 FOXF1Q12946 379 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 INSL4Q14641 139 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 MPV17LQ2QL34 196 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 DEFB113Q30KQ7 82 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 FAM74A4Q5TZK3 123 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 FOXI2Q6ZQN5 318 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 Q6ZQT0 140 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 ZNF826PQ6ZT77 177 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 SLC25A26Q70HW3 274 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 ARPINQ7Z6K5 226 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 ATP6V0E2Q8NHE4 81 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 S100A16Q96FQ6 103 aaKnown RBP0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 TMEM141Q96I45 108 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 Q96M85 177 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 DSCR8Q96T75 97 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 TIMM21Q9BVV7 248 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 RNF122Q9H9V4 155 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 NXT2Q9NPJ8 142 aaKnown RBP0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 ORMDL1Q9P0S3 153 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 TMEM14CQ9P0S9 112 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 GNG13Q9P2W3 67 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 NDUFA12Q9UI09 145 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 CCL26Q9Y258 94 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 FAM215AQ9Y5M1 114 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 DNAJC15Q9Y5T4 150 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 ERBINQ96RT1 1412 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 NSD3Q9BZ95 1437 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 TRAPPC8Q9Y2L5 1435 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 NCOA3Q9Y6Q9 1424 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 EIF4G3O43432 1585 aaKnown RBP0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 KDM5CP41229 1560 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 CCDC18Q5T9S5 1454 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 PLEKHH2Q8IVE3 1493 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 SVILO95425 2214 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 TRAV2A0A0B4J234 112 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 TRBV7-6A0A0J9YX20 115 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 UBE2L5PA0A1B0GUS4 154 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 NUPR2A6NF83 97 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 ZNF815PA8K554 130 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 ODF3BA8MYP8 253 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 OOSP1A8MZH6 123 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 H3BQ15 152 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 H3BRN7 92 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 CHKB-CPT1BH3BT56 60 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 PPP1R17O96001 155 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 TNFP01375 233 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 GYPAP02724 150 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 GYPBP06028 91 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 CCKP06307 115 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 SLC25A6P12236 298 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 CCL5P13501 91 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 SPINT3P49223 89 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 ATP5EP56381 51 aaPredicted RBP0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 GNGT1P63211 74 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 DCDP81605 110 aaKnown RBP0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 MIR22HGQ0VDD5 57 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 PMCHL1Q16048 86 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 DEFB115Q30KQ5 88 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 ZNF791Q3KP31 576 aaPredicted RBP0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 TMEM170BQ5T4T1 132 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 Q5XG85 94 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 C12orf73Q69YU5 71 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 SLC48A1Q6P1K1 146 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 ALKAL2Q6UX46 152 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 ATP11AUNQ6ZP68 121 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 Q8IYB0 196 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 DYNAPQ8N1N2 210 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 LINC00269Q8N2A0 174 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 Q8N814 137 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 C4orf3Q8WVX3 66 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 TSLPQ969D9 159 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 DPH3Q96FX2 82 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 TXNDC17Q9BRA2 123 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 Q9BRP9 147 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 LIMD2Q9BT23 127 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 SNHG12Q9BXW3 62 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 REG4Q9BYZ8 158 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 TTTY12Q9BZ98 90 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 C16orf95Q9H693 158 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 MRPL36Q9P0J6 103 aaKnown RBP0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 MPC1Q9Y5U8 109 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 IER3IP1Q9Y5U9 82 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 SPCS1Q9Y6A9 102 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 V9GYH0 126 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 ARHGAP31Q2M1Z3 1444 aa0.6□□□□□ -2.31
ECHDC1-219ENST00000526299 MED1Q15648 1581 aaPredicted RBP0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms