RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 MEF2BQ02080 365 aaPredicted RBP14.97□□□□□ -0.01
CD44-222ENST00000526025 RRN3P1Q2M238 152 aa14.97□□□□□ -0.01
CD44-222ENST00000526025 Q6AWC8 147 aa14.97□□□□□ -0.01
CD44-222ENST00000526025 C11orf52Q96A22 123 aa14.97□□□□□ -0.01
CD44-222ENST00000526025 LINC01587Q99440 93 aa14.97□□□□□ -0.01
CD44-222ENST00000526025 PYGO2Q9BRQ0 406 aa14.97□□□□□ -0.01
CD44-222ENST00000526025 TREM1Q9NP99 234 aa14.97□□□□□ -0.01
CD44-222ENST00000526025 TRAV12-3A0A0B4J271 114 aa14.96□□□□□ -0.01
CD44-222ENST00000526025 RNASE4P34096 147 aaKnown RBP14.96□□□□□ -0.01
CD44-222ENST00000526025 BTN1A1Q13410 526 aa14.96□□□□□ -0.01
CD44-222ENST00000526025 TMEM183BQ1AE95 376 aa14.96□□□□□ -0.01
CD44-222ENST00000526025 PRR9Q5T870 116 aa14.96□□□□□ -0.01
CD44-222ENST00000526025 C2CD4CQ8TF44 421 aa14.96□□□□□ -0.01
CD44-222ENST00000526025 TVP23CQ96ET8 276 aa14.96□□□□□ -0.01
CD44-222ENST00000526025 VAX2Q9UIW0 290 aa14.96□□□□□ -0.01
CD44-222ENST00000526025 J3KRW8 73 aa14.95□□□□□ -0.02
CD44-222ENST00000526025 PDE6DO43924 150 aa14.95□□□□□ -0.02
CD44-222ENST00000526025 AKR1C3P42330 323 aa14.95□□□□□ -0.02
CD44-222ENST00000526025 Q86TA4 180 aa14.95□□□□□ -0.02
CD44-222ENST00000526025 LINC00479Q96M42 142 aa14.95□□□□□ -0.02
CD44-222ENST00000526025 ZFP30Q9Y2G7 519 aa14.95□□□□□ -0.02
CD44-222ENST00000526025 UBE2G1P62253 170 aa14.94□□□□□ -0.02
CD44-222ENST00000526025 ZNF493Q6ZR52 646 aa14.94□□□□□ -0.02
CD44-222ENST00000526025 COX8CQ7Z4L0 72 aa14.94□□□□□ -0.02
CD44-222ENST00000526025 PRNTQ86SH4 94 aa14.94□□□□□ -0.02
CD44-222ENST00000526025 SGK494Q96LW2 274 aa14.94□□□□□ -0.02
CD44-222ENST00000526025 TRAV34A0A0B4J273 112 aa14.93□□□□□ -0.02
CD44-222ENST00000526025 LOC102723971A0A1B0GUV8 181 aa14.93□□□□□ -0.02
CD44-222ENST00000526025 SCO2A0A1W2PP80 73 aa14.93□□□□□ -0.02
CD44-222ENST00000526025 NDUFS6O75380 124 aaKnown RBP14.93□□□□□ -0.02
CD44-222ENST00000526025 IL17DQ8TAD2 202 aa14.93□□□□□ -0.02
CD44-222ENST00000526025 LTAP01374 205 aa14.92□□□□□ -0.02
CD44-222ENST00000526025 SMUG1Q53HV7 270 aa14.92□□□□□ -0.02
CD44-222ENST00000526025 TMEM263Q8WUH6 116 aaKnown RBP14.92□□□□□ -0.02
CD44-222ENST00000526025 C16orf74Q96GX8 76 aa14.92□□□□□ -0.02
CD44-222ENST00000526025 TRAV21A0A0B4J279 112 aa14.91□□□□□ -0.02
CD44-222ENST00000526025 TEX48A0A1B0GUV7 120 aa14.91□□□□□ -0.02
CD44-222ENST00000526025 ZNF705GA8MUZ8 300 aaPredicted RBP14.91□□□□□ -0.02
CD44-222ENST00000526025 ANXA2RQ3ZCQ2 193 aa14.91□□□□□ -0.02
CD44-222ENST00000526025 RNASE8Q8TDE3 154 aaKnown RBP14.91□□□□□ -0.02
CD44-222ENST00000526025 RBFOX3A6NFN3 312 aa14.9□□□□□ -0.02
CD44-222ENST00000526025 TDRG1Q3Y452 100 aa14.9□□□□□ -0.02
CD44-222ENST00000526025 ZNF506Q5JVG8 444 aa14.9□□□□□ -0.02
CD44-222ENST00000526025 EIF4E3Q8N5X7 224 aaKnown RBP14.9□□□□□ -0.02
CD44-222ENST00000526025 IGHV1OR15-1A0A075B7D0 117 aa14.89□□□□□ -0.03
CD44-222ENST00000526025 RGS13O14921 159 aa14.89□□□□□ -0.03
CD44-222ENST00000526025 DEFB4AO15263 64 aa14.89□□□□□ -0.03
CD44-222ENST00000526025 PFN1P07737 140 aaKnown RBP14.89□□□□□ -0.03
CD44-222ENST00000526025 C8orf49Q96NF6 230 aa14.89□□□□□ -0.03
CD44-222ENST00000526025 PLAC8L1A1L4L8 177 aa14.88□□□□□ -0.03
CD44-222ENST00000526025 GCGP01275 180 aa14.88□□□□□ -0.03
CD44-222ENST00000526025 AZU1P20160 251 aa14.88□□□□□ -0.03
CD44-222ENST00000526025 ZNF767PQ75MW2 155 aa14.88□□□□□ -0.03
CD44-222ENST00000526025 TMEM183AQ8IXX5 376 aa14.88□□□□□ -0.03
CD44-222ENST00000526025 FAM210AQ96ND0 272 aa14.88□□□□□ -0.03
CD44-222ENST00000526025 TMEM250H0YL14 139 aa14.87□□□□□ -0.03
CD44-222ENST00000526025 RPL35P42766 123 aaKnown RBP14.87□□□□□ -0.03
CD44-222ENST00000526025 IBA57Q5T440 356 aaKnown RBP14.87□□□□□ -0.03
CD44-222ENST00000526025 C11orf45Q8TAV5 145 aa14.87□□□□□ -0.03
CD44-222ENST00000526025 MUC7Q8TAX7 377 aa14.87□□□□□ -0.03
CD44-222ENST00000526025 LYRM9A8MSI8 78 aa14.86□□□□□ -0.03
CD44-222ENST00000526025 SPART-AS1P0CW21 52 aa14.86□□□□□ -0.03
CD44-222ENST00000526025 HTN1P15515 57 aa14.86□□□□□ -0.03
CD44-222ENST00000526025 ZNF80P51504 273 aaPredicted RBP14.86□□□□□ -0.03
CD44-222ENST00000526025 FAM159AQ6UWV7 190 aa14.86□□□□□ -0.03
CD44-222ENST00000526025 Q6ZQT7 251 aa14.86□□□□□ -0.03
CD44-222ENST00000526025 SMIM12Q96EX1 92 aa14.86□□□□□ -0.03
CD44-222ENST00000526025 KCNS1Q96KK3 526 aa14.86□□□□□ -0.03
CD44-222ENST00000526025 MLST8Q9BVC4 326 aa14.86□□□□□ -0.03
CD44-222ENST00000526025 DKK2Q9UBU2 259 aa14.86□□□□□ -0.03
CD44-222ENST00000526025 CXorf65A6NEN9 183 aa14.85□□□□□ -0.03
CD44-222ENST00000526025 CBY3A6NI87 242 aa14.85□□□□□ -0.03
CD44-222ENST00000526025 PRM2P04554 102 aa14.85□□□□□ -0.03
CD44-222ENST00000526025 MED9Q9NWA0 146 aa14.85□□□□□ -0.03
CD44-222ENST00000526025 TIMM8BQ9Y5J9 83 aaPredicted RBP14.85□□□□□ -0.03
CD44-222ENST00000526025 TRGV11A0A075B6L2 103 aa14.84□□□□□ -0.03
CD44-222ENST00000526025 FABP5P3A8MUU1 101 aa14.84□□□□□ -0.03
CD44-222ENST00000526025 C3orf84H3BNL1 204 aa14.84□□□□□ -0.03
CD44-222ENST00000526025 EMP1P54849 157 aa14.84□□□□□ -0.03
CD44-222ENST00000526025 RAB14P61106 215 aa14.84□□□□□ -0.03
CD44-222ENST00000526025 TOR2AQ5JU69 321 aa14.84□□□□□ -0.03
CD44-222ENST00000526025 FAM222AQ5U5X8 452 aa14.84□□□□□ -0.03
CD44-222ENST00000526025 BAGE2Q86Y30 109 aa14.84□□□□□ -0.03
CD44-222ENST00000526025 C11orf72Q8NBR9 251 aa14.84□□□□□ -0.03
CD44-222ENST00000526025 ZC2HC1AQ96GY0 325 aa14.84□□□□□ -0.03
CD44-222ENST00000526025 DERL1Q9BUN8 251 aa14.84□□□□□ -0.03
CD44-222ENST00000526025 TP53TG3Q9ULZ0 132 aa14.84□□□□□ -0.03
CD44-222ENST00000526025 CELA1Q9UNI1 258 aa14.84□□□□□ -0.03
CD44-222ENST00000526025 DAZ2Q13117 558 aaKnown RBP14.83□□□□□ -0.04
CD44-222ENST00000526025 FAM162BQ5T6X4 162 aa14.83□□□□□ -0.04
CD44-222ENST00000526025 EIF5A2Q9GZV4 153 aaKnown RBP14.83□□□□□ -0.04
CD44-222ENST00000526025 SMDT1Q9H4I9 107 aa14.83□□□□□ -0.04
CD44-222ENST00000526025 SNURFLB1AK76 121 aa14.82□□□□□ -0.04
CD44-222ENST00000526025 TCL1AP56279 114 aa14.82□□□□□ -0.04
CD44-222ENST00000526025 ZNF674Q2M3X9 581 aa14.82□□□□□ -0.04
CD44-222ENST00000526025 MUC21Q5SSG8 566 aa14.82□□□□□ -0.04
CD44-222ENST00000526025 PCNPQ8WW12 178 aaKnown RBP14.82□□□□□ -0.04
CD44-222ENST00000526025 SDF2L1Q9HCN8 221 aa14.82□□□□□ -0.04
CD44-222ENST00000526025 GNG4P50150 75 aa14.81□□□□□ -0.04
CD44-222ENST00000526025 IFITM2Q01629 132 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms