RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 GAGE12FP0CL80 117 aa4.57□□□□□ -1.68
CD44-221ENST00000526000 GAGE12GP0CL81 117 aa4.57□□□□□ -1.68
CD44-221ENST00000526000 GAGE12IP0CL82 117 aa4.57□□□□□ -1.68
CD44-221ENST00000526000 IGLC2P0DOY2 106 aa4.57□□□□□ -1.68
CD44-221ENST00000526000 TAGLN2P37802 199 aaKnown RBP4.57□□□□□ -1.68
CD44-221ENST00000526000 FAM3BP58499 235 aaPredicted RBP4.57□□□□□ -1.68
CD44-221ENST00000526000 BLOC1S1P78537 153 aa4.57□□□□□ -1.68
CD44-221ENST00000526000 ESRGQ1W209 222 aa4.57□□□□□ -1.68
CD44-221ENST00000526000 GCSAMLQ5JQS6 135 aa4.57□□□□□ -1.68
CD44-221ENST00000526000 FAM74A1Q5RGS3 127 aa4.57□□□□□ -1.68
CD44-221ENST00000526000 FAM122CQ6P4D5 195 aa4.57□□□□□ -1.68
CD44-221ENST00000526000 MIR17HGQ75NE6 70 aa4.57□□□□□ -1.68
CD44-221ENST00000526000 SUN5Q8TC36 379 aa4.57□□□□□ -1.68
CD44-221ENST00000526000 TMED6Q8WW62 240 aa4.57□□□□□ -1.68
CD44-221ENST00000526000 RAB24Q969Q5 203 aa4.57□□□□□ -1.68
CD44-221ENST00000526000 SAT2Q96F10 170 aaPredicted RBP4.57□□□□□ -1.68
CD44-221ENST00000526000 TXNDC17Q9BRA2 123 aa4.57□□□□□ -1.68
CD44-221ENST00000526000 TCEAL7Q9BRU2 100 aa4.57□□□□□ -1.68
CD44-221ENST00000526000 SLC25A2Q9BXI2 301 aa4.57□□□□□ -1.68
CD44-221ENST00000526000 TRBV19A0A075B6N1 114 aa4.56□□□□□ -1.68
CD44-221ENST00000526000 A0A1W2PRE2 83 aa4.56□□□□□ -1.68
CD44-221ENST00000526000 MAP1LC3B2A6NCE7 125 aa4.56□□□□□ -1.68
CD44-221ENST00000526000 EPM2AB3EWF7 344 aa4.56□□□□□ -1.68
CD44-221ENST00000526000 BOLA2-SMG1P6H3BVE0 249 aa4.56□□□□□ -1.68
CD44-221ENST00000526000 SMR3BP02814 79 aaPredicted RBP4.56□□□□□ -1.68
CD44-221ENST00000526000 H2AFB1P0C5Y9 115 aa4.56□□□□□ -1.68
CD44-221ENST00000526000 INAFM2P0DMQ5 153 aa4.56□□□□□ -1.68
CD44-221ENST00000526000 HOXA5P20719 270 aa4.56□□□□□ -1.68
CD44-221ENST00000526000 NKX2-5P52952 324 aaPredicted RBP4.56□□□□□ -1.68
CD44-221ENST00000526000 UBE2L3P68036 154 aaKnown RBP4.56□□□□□ -1.68
CD44-221ENST00000526000 PSG3Q16557 428 aa4.56□□□□□ -1.68
CD44-221ENST00000526000 RXFP4Q8TDU9 374 aa4.56□□□□□ -1.68
CD44-221ENST00000526000 FXYD5Q96DB9 178 aa4.56□□□□□ -1.68
CD44-221ENST00000526000 MAP1LC3BQ9GZQ8 125 aa4.56□□□□□ -1.68
CD44-221ENST00000526000 AAMDCQ9H7C9 122 aa4.56□□□□□ -1.68
CD44-221ENST00000526000 ZNF331Q9NQX6 463 aaPredicted RBP4.56□□□□□ -1.68
CD44-221ENST00000526000 MDFICQ9P1T7 246 aa4.56□□□□□ -1.68
CD44-221ENST00000526000 TIMM8BQ9Y5J9 83 aaPredicted RBP4.56□□□□□ -1.68
CD44-221ENST00000526000 LRP1BQ9NZR2 4599 aa4.55□□□□□ -1.68
CD44-221ENST00000526000 TRAV5A0A0B4J249 113 aa4.55□□□□□ -1.68
CD44-221ENST00000526000 SERTM2A0A1B0GWG4 89 aa4.55□□□□□ -1.68
CD44-221ENST00000526000 FBLL1A6NHQ2 334 aaKnown RBP4.55□□□□□ -1.68
CD44-221ENST00000526000 A8MTW9 85 aa4.55□□□□□ -1.68
CD44-221ENST00000526000 PRAC2D3DTV9 90 aa4.55□□□□□ -1.68
CD44-221ENST00000526000 NDUFS6O75380 124 aaKnown RBP4.55□□□□□ -1.68
CD44-221ENST00000526000 IFNA1P01562 189 aa4.55□□□□□ -1.68
CD44-221ENST00000526000 ARL14EPLP0DKL9 152 aa4.55□□□□□ -1.68
CD44-221ENST00000526000 GCHFRP30047 84 aa4.55□□□□□ -1.68
CD44-221ENST00000526000 CSN1S1P47710 185 aa4.55□□□□□ -1.68
CD44-221ENST00000526000 FHITP49789 147 aa4.55□□□□□ -1.68
CD44-221ENST00000526000 TAS2R60P59551 318 aa4.55□□□□□ -1.68
CD44-221ENST00000526000 MORN5Q5VZ52 161 aa4.55□□□□□ -1.68
CD44-221ENST00000526000 TEX261Q6UWH6 196 aa4.55□□□□□ -1.68
CD44-221ENST00000526000 OR8A1Q8NGG7 326 aa4.55□□□□□ -1.68
CD44-221ENST00000526000 FAM213BQ8TBF2 198 aa4.55□□□□□ -1.68
CD44-221ENST00000526000 SFT2D1Q8WV19 159 aa4.55□□□□□ -1.68
CD44-221ENST00000526000 RPUSD4Q96CM3 377 aaKnown RBP4.55□□□□□ -1.68
CD44-221ENST00000526000 MANBALQ9NQG1 85 aa4.55□□□□□ -1.68
CD44-221ENST00000526000 OTORQ9NRC9 128 aa4.55□□□□□ -1.68
CD44-221ENST00000526000 A0A096LPF7 62 aa4.54□□□□□ -1.68
CD44-221ENST00000526000 TRBV7-9A0A0J9YWB2 115 aa4.54□□□□□ -1.68
CD44-221ENST00000526000 RBAKDNA6NC62 111 aa4.54□□□□□ -1.68
CD44-221ENST00000526000 H3BQ15 152 aa4.54□□□□□ -1.68
CD44-221ENST00000526000 SLC25A5P05141 298 aaKnown RBP4.54□□□□□ -1.68
CD44-221ENST00000526000 PYYP10082 97 aa4.54□□□□□ -1.68
CD44-221ENST00000526000 TSPOP30536 169 aa4.54□□□□□ -1.68
CD44-221ENST00000526000 HAMPP81172 84 aa4.54□□□□□ -1.68
CD44-221ENST00000526000 ZNF726P1Q15940 193 aa4.54□□□□□ -1.68
CD44-221ENST00000526000 DMRTA1Q5VZB9 504 aa4.54□□□□□ -1.68
CD44-221ENST00000526000 CCDC28AQ8IWP9 274 aa4.54□□□□□ -1.68
CD44-221ENST00000526000 ZNF680Q8NEM1 530 aa4.54□□□□□ -1.68
CD44-221ENST00000526000 LYPD6BQ8NI32 183 aa4.54□□□□□ -1.68
CD44-221ENST00000526000 ZNF503Q96F45 646 aa4.54□□□□□ -1.68
CD44-221ENST00000526000 C16orf74Q96GX8 76 aa4.54□□□□□ -1.68
CD44-221ENST00000526000 TRAV12-3A0A0B4J271 114 aa4.53□□□□□ -1.68
CD44-221ENST00000526000 F6UZH7 168 aa4.53□□□□□ -1.68
CD44-221ENST00000526000 K7EQM0 130 aa4.53□□□□□ -1.68
CD44-221ENST00000526000 NDUFB4O95168 129 aa4.53□□□□□ -1.68
CD44-221ENST00000526000 IGHV3-53P01767 116 aa4.53□□□□□ -1.68
CD44-221ENST00000526000 OR10J4P0C629 311 aa4.53□□□□□ -1.68
CD44-221ENST00000526000 CDKN1BP46527 198 aa4.53□□□□□ -1.68
CD44-221ENST00000526000 XGP55808 180 aa4.53□□□□□ -1.68
CD44-221ENST00000526000 LINC00315P59091 139 aa4.53□□□□□ -1.68
CD44-221ENST00000526000 RAB14P61106 215 aa4.53□□□□□ -1.68
CD44-221ENST00000526000 ALKAL2Q6UX46 152 aa4.53□□□□□ -1.68
CD44-221ENST00000526000 Q6ZTI0 123 aa4.53□□□□□ -1.68
CD44-221ENST00000526000 C5orf17Q8NAS9 161 aa4.53□□□□□ -1.68
CD44-221ENST00000526000 OR10J6PQ8NGY7 276 aa4.53□□□□□ -1.68
CD44-221ENST00000526000 CMTM2Q8TAZ6 248 aa4.53□□□□□ -1.68
CD44-221ENST00000526000 BLNKQ8WV28 456 aa4.53□□□□□ -1.68
CD44-221ENST00000526000 HIST1H2BAQ96A08 127 aa4.53□□□□□ -1.68
CD44-221ENST00000526000 ODF3Q96PU9 254 aa4.53□□□□□ -1.68
CD44-221ENST00000526000 Q9H3A6 140 aa4.53□□□□□ -1.68
CD44-221ENST00000526000 TMPRSS5Q9H3S3 457 aa4.53□□□□□ -1.68
CD44-221ENST00000526000 FAM74A7A6NL05 159 aa4.52□□□□□ -1.69
CD44-221ENST00000526000 SNURFLB1AK76 121 aa4.52□□□□□ -1.69
CD44-221ENST00000526000 H7BYZ3 331 aa4.52□□□□□ -1.69
CD44-221ENST00000526000 SLC17A3O00476 420 aa4.52□□□□□ -1.69
CD44-221ENST00000526000 S100A9P06702 114 aaKnown RBP4.52□□□□□ -1.69
CD44-221ENST00000526000 NMBP08949 121 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms