RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 RPH3ALQ9UNE2 315 aa8.32□□□□□ -1.08
SSBP3-210ENST00000525990 ALG5Q9Y673 324 aa8.32□□□□□ -1.08
SSBP3-210ENST00000525990 DIRC3C9JPN6 131 aa8.31□□□□□ -1.08
SSBP3-210ENST00000525990 DEFA1P59665 94 aa8.31□□□□□ -1.08
SSBP3-210ENST00000525990 DEFA3P59666 94 aa8.31□□□□□ -1.08
SSBP3-210ENST00000525990 MDFICQ9P1T7 246 aa8.31□□□□□ -1.08
SSBP3-210ENST00000525990 IFNA5P01569 189 aa8.3□□□□□ -1.08
SSBP3-210ENST00000525990 NMBP08949 121 aa8.3□□□□□ -1.08
SSBP3-210ENST00000525990 PET100P0DJ07 73 aa8.3□□□□□ -1.08
SSBP3-210ENST00000525990 KHDC3LQ587J8 217 aa8.3□□□□□ -1.08
SSBP3-210ENST00000525990 IBA57Q5T440 356 aaKnown RBP8.3□□□□□ -1.08
SSBP3-210ENST00000525990 SCGB1C1Q8TD33 95 aa8.3□□□□□ -1.08
SSBP3-210ENST00000525990 C18orf15Q96N68 181 aa8.3□□□□□ -1.08
SSBP3-210ENST00000525990 KRTAP4-5Q9BYR2 181 aa8.3□□□□□ -1.08
SSBP3-210ENST00000525990 MRPS16Q9Y3D3 137 aaKnown RBP8.3□□□□□ -1.08
SSBP3-210ENST00000525990 TRAV8-1A0A0A6YYK1 113 aa8.29□□□□□ -1.08
SSBP3-210ENST00000525990 H3BNG1 76 aa8.29□□□□□ -1.08
SSBP3-210ENST00000525990 SFTA3P0C7M3 94 aa8.29□□□□□ -1.08
SSBP3-210ENST00000525990 GNG5P63218 68 aa8.29□□□□□ -1.08
SSBP3-210ENST00000525990 ZNF266Q14584 549 aa8.29□□□□□ -1.08
SSBP3-210ENST00000525990 ST6GAL2Q96JF0 529 aa8.29□□□□□ -1.08
SSBP3-210ENST00000525990 ARPC5LQ9BPX5 153 aa8.29□□□□□ -1.08
SSBP3-210ENST00000525990 UPK3BQ9BT76 320 aa8.29□□□□□ -1.08
SSBP3-210ENST00000525990 RBAKDNA6NC62 111 aa8.28□□□□□ -1.08
SSBP3-210ENST00000525990 PGPA6NDG6 321 aa8.28□□□□□ -1.08
SSBP3-210ENST00000525990 F6UZH7 168 aa8.28□□□□□ -1.08
SSBP3-210ENST00000525990 CSN1S1P47710 185 aa8.28□□□□□ -1.08
SSBP3-210ENST00000525990 ZNF415Q09FC8 603 aa8.28□□□□□ -1.08
SSBP3-210ENST00000525990 FHL2Q14192 279 aa8.28□□□□□ -1.08
SSBP3-210ENST00000525990 TMEM183BQ1AE95 376 aa8.28□□□□□ -1.08
SSBP3-210ENST00000525990 Q5BKY6 102 aa8.28□□□□□ -1.08
SSBP3-210ENST00000525990 TMEM183AQ8IXX5 376 aa8.28□□□□□ -1.08
SSBP3-210ENST00000525990 LYPD1Q8N2G4 141 aa8.28□□□□□ -1.08
SSBP3-210ENST00000525990 TVP23CQ96ET8 276 aa8.28□□□□□ -1.08
SSBP3-210ENST00000525990 C8orf49Q96NF6 230 aa8.28□□□□□ -1.08
SSBP3-210ENST00000525990 NAGKQ9UJ70 344 aa8.28□□□□□ -1.08
SSBP3-210ENST00000525990 C16orf90A8MZG2 172 aa8.27□□□□□ -1.09
SSBP3-210ENST00000525990 PAX4O43316 350 aa8.27□□□□□ -1.09
SSBP3-210ENST00000525990 TAS2R45P59539 299 aa8.27□□□□□ -1.09
SSBP3-210ENST00000525990 ACOT6Q3I5F7 207 aaPredicted RBP8.27□□□□□ -1.09
SSBP3-210ENST00000525990 Q6AWC8 147 aa8.27□□□□□ -1.09
SSBP3-210ENST00000525990 GOLT1AQ6ZVE7 132 aa8.27□□□□□ -1.09
SSBP3-210ENST00000525990 HSD17B11Q8NBQ5 300 aa8.27□□□□□ -1.09
SSBP3-210ENST00000525990 ZNF479Q96JC4 524 aa8.27□□□□□ -1.09
SSBP3-210ENST00000525990 SGK494Q96LW2 274 aa8.27□□□□□ -1.09
SSBP3-210ENST00000525990 OTORQ9NRC9 128 aa8.27□□□□□ -1.09
SSBP3-210ENST00000525990 TRBV7-9A0A0J9YWB2 115 aa8.26□□□□□ -1.09
SSBP3-210ENST00000525990 A0A1W2PPV4 95 aa8.26□□□□□ -1.09
SSBP3-210ENST00000525990 GNRH2O43555 120 aa8.26□□□□□ -1.09
SSBP3-210ENST00000525990 ARL14EPLP0DKL9 152 aa8.26□□□□□ -1.09
SSBP3-210ENST00000525990 CRYBA4P53673 196 aa8.26□□□□□ -1.09
SSBP3-210ENST00000525990 OR10G4Q8NGN3 311 aa8.26□□□□□ -1.09
SSBP3-210ENST00000525990 OR10G9Q8NGN4 311 aa8.26□□□□□ -1.09
SSBP3-210ENST00000525990 OR10G7Q8NGN6 311 aa8.26□□□□□ -1.09
SSBP3-210ENST00000525990 SH3BGRL3Q9H299 93 aa8.26□□□□□ -1.09
SSBP3-210ENST00000525990 TNFRSF18Q9Y5U5 241 aa8.26□□□□□ -1.09
SSBP3-210ENST00000525990 ICOSQ9Y6W8 199 aa8.26□□□□□ -1.09
SSBP3-210ENST00000525990 LINC00315P59091 139 aa8.25□□□□□ -1.09
SSBP3-210ENST00000525990 KRTAP10-2P60368 255 aa8.25□□□□□ -1.09
SSBP3-210ENST00000525990 TTC32Q5I0X7 151 aa8.25□□□□□ -1.09
SSBP3-210ENST00000525990 PQLC2Q6ZP29 291 aa8.25□□□□□ -1.09
SSBP3-210ENST00000525990 SPATA12Q7Z6I5 190 aa8.25□□□□□ -1.09
SSBP3-210ENST00000525990 CMTM2Q8TAZ6 248 aa8.25□□□□□ -1.09
SSBP3-210ENST00000525990 PRO0255Q9UI72 69 aa8.25□□□□□ -1.09
SSBP3-210ENST00000525990 RYR1P21817 5038 aa8.24□□□□□ -1.09
SSBP3-210ENST00000525990 NXPH4O95158 308 aa8.24□□□□□ -1.09
SSBP3-210ENST00000525990 TYMSP04818 313 aa8.24□□□□□ -1.09
SSBP3-210ENST00000525990 ATP6V0CP27449 155 aa8.24□□□□□ -1.09
SSBP3-210ENST00000525990 FUSP35637 526 aaKnown RBP eCLIP8.24□□□□□ -1.092e-6■■■□□ 16.5
SSBP3-210ENST00000525990 CDC34P49427 236 aaPredicted RBP8.24□□□□□ -1.09
SSBP3-210ENST00000525990 FAM159AQ6UWV7 190 aa8.24□□□□□ -1.09
SSBP3-210ENST00000525990 Q6ZRN7 208 aaPredicted RBP8.24□□□□□ -1.09
SSBP3-210ENST00000525990 AQP10Q96PS8 301 aa8.24□□□□□ -1.09
SSBP3-210ENST00000525990 BATF3Q9NR55 127 aa8.24□□□□□ -1.09
SSBP3-210ENST00000525990 C11orf21Q9P2W6 132 aa8.24□□□□□ -1.09
SSBP3-210ENST00000525990 HHLA3Q9XRX5 114 aa8.24□□□□□ -1.09
SSBP3-210ENST00000525990 LENEPQ9Y5L5 61 aa8.24□□□□□ -1.09
SSBP3-210ENST00000525990 TRGV4A0A0C4DH28 118 aa8.23□□□□□ -1.09
SSBP3-210ENST00000525990 IGHV3-16A0A0C4DH30 117 aa8.23□□□□□ -1.09
SSBP3-210ENST00000525990 LOC100131303A0A0U1RQF7 123 aa8.23□□□□□ -1.09
SSBP3-210ENST00000525990 SIVA1O15304 175 aa8.23□□□□□ -1.09
SSBP3-210ENST00000525990 PTTG1O95997 202 aa8.23□□□□□ -1.09
SSBP3-210ENST00000525990 STAG3L2P0CL84 134 aa8.23□□□□□ -1.09
SSBP3-210ENST00000525990 STAG3L3P0CL85 134 aa8.23□□□□□ -1.09
SSBP3-210ENST00000525990 ZNF80P51504 273 aaPredicted RBP8.23□□□□□ -1.09
SSBP3-210ENST00000525990 LYPD5Q6UWN5 251 aa8.23□□□□□ -1.09
SSBP3-210ENST00000525990 TMEM75Q8N9X5 138 aa8.23□□□□□ -1.09
SSBP3-210ENST00000525990 TMED6Q8WW62 240 aa8.23□□□□□ -1.09
SSBP3-210ENST00000525990 RAB24Q969Q5 203 aa8.23□□□□□ -1.09
SSBP3-210ENST00000525990 MED28Q9H204 178 aa8.23□□□□□ -1.09
SSBP3-210ENST00000525990 TREM1Q9NP99 234 aa8.23□□□□□ -1.09
SSBP3-210ENST00000525990 TRGV11A0A075B6L2 103 aa8.22□□□□□ -1.09
SSBP3-210ENST00000525990 A0A1W2PPQ1 181 aa8.22□□□□□ -1.09
SSBP3-210ENST00000525990 RNF222A6NCQ9 220 aa8.22□□□□□ -1.09
SSBP3-210ENST00000525990 GGTLC3B5MD39 225 aa8.22□□□□□ -1.09
SSBP3-210ENST00000525990 K7EQD1 137 aa8.22□□□□□ -1.09
SSBP3-210ENST00000525990 GCHFRP30047 84 aa8.22□□□□□ -1.09
SSBP3-210ENST00000525990 TDRG1Q3Y452 100 aa8.22□□□□□ -1.09
SSBP3-210ENST00000525990 WFDC10BQ8IUB3 73 aa8.22□□□□□ -1.09
SSBP3-210ENST00000525990 OR2G3Q8NGZ4 309 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms