RNA–Protein interactions for RNA: ENST00000525962.5

TGFBR3-207, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-207ENST00000525962 TEX48A0A1B0GUV7 120 aa5.5□□□□□ -1.53
TGFBR3-207ENST00000525962 C9orf118A6NHY6 69 aa5.5□□□□□ -1.53
TGFBR3-207ENST00000525962 CD7P09564 240 aa5.5□□□□□ -1.53
TGFBR3-207ENST00000525962 CTRLP40313 264 aa5.5□□□□□ -1.53
TGFBR3-207ENST00000525962 SRSF1Q07955 248 aaKnown RBP eCLIP5.5□□□□□ -1.53
TGFBR3-207ENST00000525962 ZNF672Q499Z4 452 aaPredicted RBP5.5□□□□□ -1.53
TGFBR3-207ENST00000525962 FAM104BQ5XKR9 115 aa5.5□□□□□ -1.53
TGFBR3-207ENST00000525962 BRD3OSQ6XYD6 125 aa5.5□□□□□ -1.53
TGFBR3-207ENST00000525962 FAM57AQ8TBR7 257 aa5.5□□□□□ -1.53
TGFBR3-207ENST00000525962 MRPL35Q9NZE8 188 aaKnown RBP5.5□□□□□ -1.53
TGFBR3-207ENST00000525962 PIEZO1Q92508 2521 aa5.5□□□□□ -1.53
TGFBR3-207ENST00000525962 A0A087WWL8 130 aa5.5□□□□□ -1.53
TGFBR3-207ENST00000525962 IGLV1-44P01699 117 aa5.5□□□□□ -1.53
TGFBR3-207ENST00000525962 IGHG3P01860 377 aa5.5□□□□□ -1.53
TGFBR3-207ENST00000525962 EGR2P11161 476 aaPredicted RBP5.5□□□□□ -1.53
TGFBR3-207ENST00000525962 ASIPP42127 132 aa5.5□□□□□ -1.53
TGFBR3-207ENST00000525962 PVRIGQ6DKI7 326 aa5.5□□□□□ -1.53
TGFBR3-207ENST00000525962 DEFB125Q8N687 156 aa5.5□□□□□ -1.53
TGFBR3-207ENST00000525962 Q8N976 141 aa5.49□□□□□ -1.53
TGFBR3-207ENST00000525962 TNRC6AQ8NDV7 1962 aaKnown RBP5.49□□□□□ -1.53
TGFBR3-207ENST00000525962 IGKV1D-37A0A075B6S9 117 aa5.49□□□□□ -1.53
TGFBR3-207ENST00000525962 A0A1B0GW15 77 aa5.49□□□□□ -1.53
TGFBR3-207ENST00000525962 AZU1P20160 251 aa5.49□□□□□ -1.53
TGFBR3-207ENST00000525962 FXYD2P54710 66 aa5.49□□□□□ -1.53
TGFBR3-207ENST00000525962 EIF4EBP1Q13541 118 aaPredicted RBP5.49□□□□□ -1.53
TGFBR3-207ENST00000525962 TMEM30BQ3MIR4 351 aa5.49□□□□□ -1.53
TGFBR3-207ENST00000525962 ZNF833PQ6ZTB9 187 aa5.49□□□□□ -1.53
TGFBR3-207ENST00000525962 FAM231DQ6ZW35 169 aa5.49□□□□□ -1.53
TGFBR3-207ENST00000525962 MBD6Q96DN6 1003 aa5.49□□□□□ -1.53
TGFBR3-207ENST00000525962 ATP6V0BQ99437 205 aa5.49□□□□□ -1.53
TGFBR3-207ENST00000525962 FN1P02751 2386 aaKnown RBP5.49□□□□□ -1.53
TGFBR3-207ENST00000525962 IGKV1-17P01599 117 aa5.49□□□□□ -1.53
TGFBR3-207ENST00000525962 LAGE3Q14657 143 aa5.49□□□□□ -1.53
TGFBR3-207ENST00000525962 TEX36Q5VZQ5 186 aa5.49□□□□□ -1.53
TGFBR3-207ENST00000525962 LINC01549A6NIU2 74 aa5.48□□□□□ -1.53
TGFBR3-207ENST00000525962 CEACAM4O75871 244 aa5.48□□□□□ -1.53
TGFBR3-207ENST00000525962 SNCGO76070 127 aa5.48□□□□□ -1.53
TGFBR3-207ENST00000525962 FOXE3Q13461 319 aa5.48□□□□□ -1.53
TGFBR3-207ENST00000525962 WFDC2Q14508 124 aa5.48□□□□□ -1.53
TGFBR3-207ENST00000525962 EEF1AKMT3Q96AZ1 226 aa5.48□□□□□ -1.53
TGFBR3-207ENST00000525962 SHANK2-AS3Q9BTD1 123 aa5.48□□□□□ -1.53
TGFBR3-207ENST00000525962 ZFHX4Q86UP3 3567 aa5.48□□□□□ -1.53
TGFBR3-207ENST00000525962 MBD3L4A6NDZ8 208 aaPredicted RBP5.48□□□□□ -1.53
TGFBR3-207ENST00000525962 MBD3L3A6NE82 208 aaPredicted RBP5.48□□□□□ -1.53
TGFBR3-207ENST00000525962 MBD3L5A6NJ08 208 aaPredicted RBP5.48□□□□□ -1.53
TGFBR3-207ENST00000525962 NPIPB6E9PJ23 425 aa5.48□□□□□ -1.53
TGFBR3-207ENST00000525962 F6UB75 175 aa5.48□□□□□ -1.53
TGFBR3-207ENST00000525962 H3BRM9 83 aa5.48□□□□□ -1.53
TGFBR3-207ENST00000525962 GAS8-AS1O95177 125 aa5.48□□□□□ -1.53
TGFBR3-207ENST00000525962 MBD3L2Q8NHZ7 208 aaPredicted RBP5.48□□□□□ -1.53
TGFBR3-207ENST00000525962 MRAP2Q96G30 205 aa5.48□□□□□ -1.53
TGFBR3-207ENST00000525962 DUX5Q96PT3 197 aa5.48□□□□□ -1.53
TGFBR3-207ENST00000525962 HIVEP2P31629 2446 aa5.48□□□□□ -1.53
TGFBR3-207ENST00000525962 A0A1W2PPM0 123 aa5.48□□□□□ -1.53
TGFBR3-207ENST00000525962 PRAC2D3DTV9 90 aa5.48□□□□□ -1.53
TGFBR3-207ENST00000525962 SPINK8P0C7L1 97 aa5.48□□□□□ -1.53
TGFBR3-207ENST00000525962 GP9P14770 177 aa5.48□□□□□ -1.53
TGFBR3-207ENST00000525962 ZNF491Q8N8L2 437 aa5.48□□□□□ -1.53
TGFBR3-207ENST00000525962 WIPF2Q8TF74 440 aaPredicted RBP5.48□□□□□ -1.53
TGFBR3-207ENST00000525962 ANAPC13Q9BS18 74 aa5.48□□□□□ -1.53
TGFBR3-207ENST00000525962 PKD1L2Q7Z442 2459 aa5.48□□□□□ -1.53
TGFBR3-207ENST00000525962 COX6CP09669 75 aa5.47□□□□□ -1.53
TGFBR3-207ENST00000525962 C5orf64Q2M2E5 130 aa5.47□□□□□ -1.53
TGFBR3-207ENST00000525962 TMEM155Q4W5P6 130 aa5.47□□□□□ -1.53
TGFBR3-207ENST00000525962 SP5Q6BEB4 398 aaPredicted RBP5.47□□□□□ -1.53
TGFBR3-207ENST00000525962 SCRT2Q9NQ03 307 aa5.47□□□□□ -1.53
TGFBR3-207ENST00000525962 TET2Q6N021 2002 aaPredicted RBP5.47□□□□□ -1.53
TGFBR3-207ENST00000525962 K7EP34 96 aa5.47□□□□□ -1.53
TGFBR3-207ENST00000525962 LHBP01229 141 aa5.47□□□□□ -1.53
TGFBR3-207ENST00000525962 ZNF883P0CG24 379 aa5.47□□□□□ -1.53
TGFBR3-207ENST00000525962 SLC25A16P16260 332 aa5.47□□□□□ -1.53
TGFBR3-207ENST00000525962 KLRB1Q12918 225 aa5.47□□□□□ -1.53
TGFBR3-207ENST00000525962 PRR25Q96S07 402 aa5.47□□□□□ -1.53
TGFBR3-207ENST00000525962 CITED1Q99966 193 aa5.47□□□□□ -1.53
TGFBR3-207ENST00000525962 NAV2Q8IVL1 2488 aa5.47□□□□□ -1.53
TGFBR3-207ENST00000525962 SCGB1A1P11684 91 aa5.47□□□□□ -1.53
TGFBR3-207ENST00000525962 MEIG1Q5JSS6 88 aa5.47□□□□□ -1.53
TGFBR3-207ENST00000525962 DYNAPQ8N1N2 210 aa5.47□□□□□ -1.53
TGFBR3-207ENST00000525962 GEMIN7Q9H840 131 aaKnown RBP5.47□□□□□ -1.53
TGFBR3-207ENST00000525962 ZZEF1O43149 2961 aa5.46□□□□□ -1.53
TGFBR3-207ENST00000525962 ADARB2-AS1A8MUL3 147 aa5.46□□□□□ -1.53
TGFBR3-207ENST00000525962 FNDC10F2Z333 226 aa5.46□□□□□ -1.53
TGFBR3-207ENST00000525962 HAX1O00165 279 aa5.46□□□□□ -1.53
TGFBR3-207ENST00000525962 ZNF688P0C7X2 276 aa5.46□□□□□ -1.53
TGFBR3-207ENST00000525962 RAB9AP51151 201 aa5.46□□□□□ -1.53
TGFBR3-207ENST00000525962 SUMO2P61956 95 aaKnown RBP5.46□□□□□ -1.53
TGFBR3-207ENST00000525962 C11orf44Q8N8P7 122 aa5.46□□□□□ -1.53
TGFBR3-207ENST00000525962 KLHL30-AS1Q8NEE0 82 aa5.46□□□□□ -1.53
TGFBR3-207ENST00000525962 ZNF625Q96I27 306 aaPredicted RBP5.46□□□□□ -1.53
TGFBR3-207ENST00000525962 COL12A1Q99715 3063 aa5.46□□□□□ -1.54
TGFBR3-207ENST00000525962 A8MWV9 139 aa5.46□□□□□ -1.54
TGFBR3-207ENST00000525962 FCN3O75636 299 aa5.46□□□□□ -1.54
TGFBR3-207ENST00000525962 HLA-DRB4P13762 266 aa5.46□□□□□ -1.54
TGFBR3-207ENST00000525962 KLF5Q13887 457 aaPredicted RBP5.46□□□□□ -1.54
TGFBR3-207ENST00000525962 DTX2Q86UW9 622 aa5.46□□□□□ -1.54
TGFBR3-207ENST00000525962 TEX29Q8N6K0 151 aa5.46□□□□□ -1.54
TGFBR3-207ENST00000525962 SYT8Q8NBV8 401 aa5.46□□□□□ -1.54
TGFBR3-207ENST00000525962 URB1-AS1Q96HZ7 61 aa5.46□□□□□ -1.54
TGFBR3-207ENST00000525962 TOMM7Q9P0U1 55 aa5.46□□□□□ -1.54
TGFBR3-207ENST00000525962 ZNF492Q9P255 531 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms