RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 FOXI2Q6ZQN5 318 aa0.98□□□□□ -2.25
COPB1-203ENST00000525214 CTAGE3PQ8IX95 158 aa0.98□□□□□ -2.25
COPB1-203ENST00000525214 ATOH7Q8N100 152 aa0.98□□□□□ -2.25
COPB1-203ENST00000525214 LINC00269Q8N2A0 174 aa0.98□□□□□ -2.25
COPB1-203ENST00000525214 Q8N2B8 174 aa0.98□□□□□ -2.25
COPB1-203ENST00000525214 TSTD1Q8NFU3 115 aa0.98□□□□□ -2.25
COPB1-203ENST00000525214 ZNF563Q8TA94 476 aa0.98□□□□□ -2.25
COPB1-203ENST00000525214 LINC00052Q96N35 136 aa0.98□□□□□ -2.25
COPB1-203ENST00000525214 NABP2Q9BQ15 211 aa0.98□□□□□ -2.25
COPB1-203ENST00000525214 SMIM7Q9BQ49 75 aa0.98□□□□□ -2.25
COPB1-203ENST00000525214 VPS25Q9BRG1 176 aa0.98□□□□□ -2.25
COPB1-203ENST00000525214 FKBP11Q9NYL4 201 aa0.98□□□□□ -2.25
COPB1-203ENST00000525214 HLA-DRB4X5D2U9 266 aa0.98□□□□□ -2.25
COPB1-203ENST00000525214 KDM5CP41229 1560 aa0.98□□□□□ -2.25
COPB1-203ENST00000525214 SPTBP11277 2137 aa0.98□□□□□ -2.25
COPB1-203ENST00000525214 COL1A1P02452 1464 aaPredicted RBP0.98□□□□□ -2.25
COPB1-203ENST00000525214 CCDC171Q6TFL3 1326 aa0.97□□□□□ -2.25
COPB1-203ENST00000525214 IGLV3-32A0A0A0MS00 114 aa0.97□□□□□ -2.25
COPB1-203ENST00000525214 IGKV3D-7A0A0C4DH55 119 aa0.97□□□□□ -2.25
COPB1-203ENST00000525214 IGKV3OR2-268A0A0C4DH90 116 aa0.97□□□□□ -2.25
COPB1-203ENST00000525214 C3orf85A0A1B0GTC6 90 aa0.97□□□□□ -2.25
COPB1-203ENST00000525214 TRBV6-4A0A1B0GX49 114 aa0.97□□□□□ -2.25
COPB1-203ENST00000525214 C9orf170A2RU37 121 aa0.97□□□□□ -2.25
COPB1-203ENST00000525214 C5orf67F2Z3F1 127 aa0.97□□□□□ -2.25
COPB1-203ENST00000525214 H3BRM9 83 aa0.97□□□□□ -2.25
COPB1-203ENST00000525214 K7EP13 123 aa0.97□□□□□ -2.25
COPB1-203ENST00000525214 M0R2N4 97 aa0.97□□□□□ -2.25
COPB1-203ENST00000525214 NUPR1O60356 82 aa0.97□□□□□ -2.25
COPB1-203ENST00000525214 IGLC6P0CF74 106 aa0.97□□□□□ -2.25
COPB1-203ENST00000525214 KDELR1P24390 212 aa0.97□□□□□ -2.25
COPB1-203ENST00000525214 SNRPD3P62318 126 aaKnown RBP0.97□□□□□ -2.25
COPB1-203ENST00000525214 MPV17LQ2QL34 196 aa0.97□□□□□ -2.25
COPB1-203ENST00000525214 UNQ6190/PRO20217Q6UXQ8 127 aa0.97□□□□□ -2.25
COPB1-203ENST00000525214 C10orf111Q8N326 155 aa0.97□□□□□ -2.25
COPB1-203ENST00000525214 DEFB119Q8N690 84 aa0.97□□□□□ -2.25
COPB1-203ENST00000525214 Q8TAT8 98 aa0.97□□□□□ -2.25
COPB1-203ENST00000525214 SLC35B3Q9H1N7 401 aa0.97□□□□□ -2.25
COPB1-203ENST00000525214 LAMB4A4D0S4 1761 aa0.97□□□□□ -2.25
COPB1-203ENST00000525214 COL24A1Q17RW2 1714 aa0.97□□□□□ -2.25
COPB1-203ENST00000525214 PTPRFP10586 1907 aa0.97□□□□□ -2.25
COPB1-203ENST00000525214 PRG4Q92954 1404 aaPredicted RBP0.97□□□□□ -2.25
COPB1-203ENST00000525214 PLXNA4Q9HCM2 1894 aa0.97□□□□□ -2.25
COPB1-203ENST00000525214 KIAA0100Q14667 2235 aaKnown RBP0.96□□□□□ -2.26
COPB1-203ENST00000525214 MYH9P35579 1960 aaKnown RBP0.96□□□□□ -2.26
COPB1-203ENST00000525214 MED12Q93074 2177 aa0.96□□□□□ -2.26
COPB1-203ENST00000525214 IGKV2-40A0A087WW87 121 aaPredicted RBP0.96□□□□□ -2.26
COPB1-203ENST00000525214 LOC110117498A0A087WWA1 95 aa0.96□□□□□ -2.26
COPB1-203ENST00000525214 IGHV1-24A0A0C4DH33 117 aa0.96□□□□□ -2.26
COPB1-203ENST00000525214 K7ERU9 68 aa0.96□□□□□ -2.26
COPB1-203ENST00000525214 GEMIN2O14893 280 aaKnown RBP0.96□□□□□ -2.26
COPB1-203ENST00000525214 INE1O15225 51 aa0.96□□□□□ -2.26
COPB1-203ENST00000525214 EDF1O60869 148 aaKnown RBP0.96□□□□□ -2.26
COPB1-203ENST00000525214 IGKV2D-40P01614 121 aaPredicted RBP0.96□□□□□ -2.26
COPB1-203ENST00000525214 IGHV3-33P01772 117 aa0.96□□□□□ -2.26
COPB1-203ENST00000525214 COPZ1P61923 177 aa0.96□□□□□ -2.26
COPB1-203ENST00000525214 RPS25P62851 125 aaKnown RBP0.96□□□□□ -2.26
COPB1-203ENST00000525214 SELENOWP63302 87 aa0.96□□□□□ -2.26
COPB1-203ENST00000525214 PLGLB1Q02325 96 aa0.96□□□□□ -2.26
COPB1-203ENST00000525214 MIR22HGQ0VDD5 57 aa0.96□□□□□ -2.26
COPB1-203ENST00000525214 IZUMO2Q6UXV1 221 aa0.96□□□□□ -2.26
COPB1-203ENST00000525214 LINC00299Q6ZSB3 139 aa0.96□□□□□ -2.26
COPB1-203ENST00000525214 OTOSQ8NHW6 89 aa0.96□□□□□ -2.26
COPB1-203ENST00000525214 SAR1AQ9NR31 198 aa0.96□□□□□ -2.26
COPB1-203ENST00000525214 CDC42SE1Q9NRR8 79 aa0.96□□□□□ -2.26
COPB1-203ENST00000525214 COMMD3Q9UBI1 195 aa0.96□□□□□ -2.26
COPB1-203ENST00000525214 ERG28Q9UKR5 140 aa0.96□□□□□ -2.26
COPB1-203ENST00000525214 TNFSF18Q9UNG2 199 aa0.96□□□□□ -2.26
COPB1-203ENST00000525214 DNAJC15Q9Y5T4 150 aa0.96□□□□□ -2.26
COPB1-203ENST00000525214 UHRF1BP1LA0JNW5 1464 aa0.96□□□□□ -2.26
COPB1-203ENST00000525214 MGAMO43451 1857 aa0.96□□□□□ -2.26
COPB1-203ENST00000525214 ARHGAP31Q2M1Z3 1444 aa0.96□□□□□ -2.26
COPB1-203ENST00000525214 SPAG17Q6Q759 2223 aa0.96□□□□□ -2.26
COPB1-203ENST00000525214 ASCC3Q8N3C0 2202 aaKnown RBP0.96□□□□□ -2.26
COPB1-203ENST00000525214 ADGRB2O60241 1585 aa0.96□□□□□ -2.26
COPB1-203ENST00000525214 BICRAQ9NZM4 1560 aa0.96□□□□□ -2.26
COPB1-203ENST00000525214 ZGRF1Q86YA3 2104 aa0.95□□□□□ -2.26
COPB1-203ENST00000525214 HELZP42694 1942 aaKnown RBP0.95□□□□□ -2.26
COPB1-203ENST00000525214 NCOA6Q14686 2063 aaPredicted RBP0.95□□□□□ -2.26
COPB1-203ENST00000525214 USP54Q70EL1 1684 aa0.95□□□□□ -2.26
COPB1-203ENST00000525214 WDR7Q9Y4E6 1490 aa0.95□□□□□ -2.26
COPB1-203ENST00000525214 IGKV3-7A0A075B6H7 116 aa0.95□□□□□ -2.26
COPB1-203ENST00000525214 IGKV2-29A2NJV5 120 aaPredicted RBP0.95□□□□□ -2.26
COPB1-203ENST00000525214 BBIP1A8MTZ0 92 aa0.95□□□□□ -2.26
COPB1-203ENST00000525214 CDC42EP2O14613 210 aa0.95□□□□□ -2.26
COPB1-203ENST00000525214 NPFFO15130 113 aa0.95□□□□□ -2.26
COPB1-203ENST00000525214 HCRTO43612 131 aa0.95□□□□□ -2.26
COPB1-203ENST00000525214 CD14P08571 375 aa0.95□□□□□ -2.26
COPB1-203ENST00000525214 LINC00694P0DN24 101 aa0.95□□□□□ -2.26
COPB1-203ENST00000525214 RPL13AP3Q6NVV1 102 aa0.95□□□□□ -2.26
COPB1-203ENST00000525214 FAM19A2Q8N3H0 131 aa0.95□□□□□ -2.26
COPB1-203ENST00000525214 TCTEX1D1Q8N7M0 179 aa0.95□□□□□ -2.26
COPB1-203ENST00000525214 ARL11Q969Q4 196 aa0.95□□□□□ -2.26
COPB1-203ENST00000525214 LINC00526Q96FQ7 95 aa0.95□□□□□ -2.26
COPB1-203ENST00000525214 MRPL57Q9BQC6 102 aaKnown RBP0.95□□□□□ -2.26
COPB1-203ENST00000525214 LPAR5Q9H1C0 372 aa0.95□□□□□ -2.26
COPB1-203ENST00000525214 TMEM14CQ9P0S9 112 aa0.95□□□□□ -2.26
COPB1-203ENST00000525214 NCOA3Q9Y6Q9 1424 aa0.95□□□□□ -2.26
COPB1-203ENST00000525214 TRPM7Q96QT4 1865 aa0.95□□□□□ -2.26
COPB1-203ENST00000525214 CECR2Q9BXF3 1484 aa0.94□□□□□ -2.26
COPB1-203ENST00000525214 MYH7P12883 1935 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms