RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 KAAG1Q9UBP8 84 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 TBL2Q9Y4P3 447 aaKnown RBP1.85□□□□□ -2.11
SKP1-212ENST00000523966 ADGRG4Q8IZF6 3080 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 HMCN1Q96RW7 5635 aa1.85□□□□□ -2.11
SKP1-212ENST00000523966 ZNF462Q96JM2 2506 aa1.84□□□□□ -2.11
SKP1-212ENST00000523966 USP24Q9UPU5 2620 aa1.84□□□□□ -2.11
SKP1-212ENST00000523966 IGHV1-69-2A0A0G2JMI3 117 aa1.84□□□□□ -2.11
SKP1-212ENST00000523966 C3orf85A0A1B0GTC6 90 aa1.84□□□□□ -2.11
SKP1-212ENST00000523966 A0A1B0GU33 70 aa1.84□□□□□ -2.11
SKP1-212ENST00000523966 DEFB108AA8MXU0 73 aa1.84□□□□□ -2.11
SKP1-212ENST00000523966 H0Y980 276 aa1.84□□□□□ -2.11
SKP1-212ENST00000523966 TOR1AO14656 332 aa1.84□□□□□ -2.11
SKP1-212ENST00000523966 NDUFB3O43676 98 aa1.84□□□□□ -2.11
SKP1-212ENST00000523966 YPEL1O60688 119 aa1.84□□□□□ -2.11
SKP1-212ENST00000523966 PGLYRP1O75594 196 aaPredicted RBP1.84□□□□□ -2.11
SKP1-212ENST00000523966 IFNA7P01567 189 aa1.84□□□□□ -2.11
SKP1-212ENST00000523966 HBZP02008 142 aa1.84□□□□□ -2.11
SKP1-212ENST00000523966 SCTP09683 121 aa1.84□□□□□ -2.11
SKP1-212ENST00000523966 SLC25A4P12235 298 aa1.84□□□□□ -2.11
SKP1-212ENST00000523966 SLC25A6P12236 298 aa1.84□□□□□ -2.11
SKP1-212ENST00000523966 PVALBP20472 110 aaPredicted RBP1.84□□□□□ -2.11
SKP1-212ENST00000523966 PSMB6P28072 239 aa1.84□□□□□ -2.11
SKP1-212ENST00000523966 AP2S1P53680 142 aaPredicted RBP1.84□□□□□ -2.11
SKP1-212ENST00000523966 EDDM3BP56851 147 aa1.84□□□□□ -2.11
SKP1-212ENST00000523966 H2BFSP57053 126 aa1.84□□□□□ -2.11
SKP1-212ENST00000523966 TMEM33P57088 247 aa1.84□□□□□ -2.11
SKP1-212ENST00000523966 FXYD4P59646 89 aa1.84□□□□□ -2.11
SKP1-212ENST00000523966 SUPT4H1P63272 117 aaKnown RBP1.84□□□□□ -2.11
SKP1-212ENST00000523966 TFF3Q07654 80 aa1.84□□□□□ -2.11
SKP1-212ENST00000523966 AESQ08117 197 aa1.84□□□□□ -2.11
SKP1-212ENST00000523966 CATR1Q13166 79 aa1.84□□□□□ -2.11
SKP1-212ENST00000523966 OR2F1Q13607 317 aa1.84□□□□□ -2.11
SKP1-212ENST00000523966 ZNF345Q14585 488 aa1.84□□□□□ -2.11
SKP1-212ENST00000523966 EIF5AL1Q6IS14 154 aaKnown RBP1.84□□□□□ -2.11
SKP1-212ENST00000523966 ZNF767PQ75MW2 155 aa1.84□□□□□ -2.11
SKP1-212ENST00000523966 TCF23Q7RTU1 214 aa1.84□□□□□ -2.11
SKP1-212ENST00000523966 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.84□□□□□ -2.11
SKP1-212ENST00000523966 PPP1R1CQ8WVI7 109 aa1.84□□□□□ -2.11
SKP1-212ENST00000523966 MAFIPQ8WZ33 124 aa1.84□□□□□ -2.11
SKP1-212ENST00000523966 LSM10Q969L4 123 aaKnown RBP1.84□□□□□ -2.11
SKP1-212ENST00000523966 ARL11Q969Q4 196 aa1.84□□□□□ -2.11
SKP1-212ENST00000523966 C2orf50Q96LR7 162 aa1.84□□□□□ -2.11
SKP1-212ENST00000523966 TMEM56Q96MV1 263 aa1.84□□□□□ -2.11
SKP1-212ENST00000523966 YPEL2Q96QA6 119 aa1.84□□□□□ -2.11
SKP1-212ENST00000523966 OR8B2Q96RD0 313 aa1.84□□□□□ -2.11
SKP1-212ENST00000523966 TMEM222Q9H0R3 208 aa1.84□□□□□ -2.11
SKP1-212ENST00000523966 NAA60Q9H7X0 242 aa1.84□□□□□ -2.11
SKP1-212ENST00000523966 JPT1Q9UK76 154 aa1.84□□□□□ -2.11
SKP1-212ENST00000523966 PRELID3BQ9Y3B1 194 aa1.84□□□□□ -2.11
SKP1-212ENST00000523966 HSPB11Q9Y547 144 aa1.84□□□□□ -2.11
SKP1-212ENST00000523966 PHLDA3Q9Y5J5 127 aa1.84□□□□□ -2.11
SKP1-212ENST00000523966 LINC00312Q9Y6C7 94 aa1.84□□□□□ -2.11
SKP1-212ENST00000523966 TMEM56-RWDD3S4R434 201 aa1.84□□□□□ -2.11
SKP1-212ENST00000523966 DOPEY2Q9Y3R5 2298 aa1.84□□□□□ -2.12
SKP1-212ENST00000523966 DSCAML1Q8TD84 2053 aa1.84□□□□□ -2.12
SKP1-212ENST00000523966 USP9XQ93008 2570 aaPredicted RBP1.84□□□□□ -2.12
SKP1-212ENST00000523966 NAV2Q8IVL1 2488 aa1.83□□□□□ -2.12
SKP1-212ENST00000523966 FASNP49327 2511 aaKnown RBP1.83□□□□□ -2.12
SKP1-212ENST00000523966 LAMA5O15230 3695 aa1.83□□□□□ -2.12
SKP1-212ENST00000523966 ASPMQ8IZT6 3477 aa1.83□□□□□ -2.12
SKP1-212ENST00000523966 NAV3Q8IVL0 2385 aa1.83□□□□□ -2.12
SKP1-212ENST00000523966 FXYD6-FXYD2A0A087WZ82 144 aa1.83□□□□□ -2.12
SKP1-212ENST00000523966 BORCS7-ASMTA0A0B4J1R7 106 aa1.83□□□□□ -2.12
SKP1-212ENST00000523966 KANTRA0A1W2PQU2 76 aa1.83□□□□□ -2.12
SKP1-212ENST00000523966 TMEM250H0YL14 139 aa1.83□□□□□ -2.12
SKP1-212ENST00000523966 ARPC5O15511 151 aa1.83□□□□□ -2.12
SKP1-212ENST00000523966 ZZEF1O43149 2961 aa1.83□□□□□ -2.12
SKP1-212ENST00000523966 MPC2O95563 127 aa1.83□□□□□ -2.12
SKP1-212ENST00000523966 GYPAP02724 150 aa1.83□□□□□ -2.12
SKP1-212ENST00000523966 RBP4P02753 201 aa1.83□□□□□ -2.12
SKP1-212ENST00000523966 CGB3P0DN86 165 aa1.83□□□□□ -2.12
SKP1-212ENST00000523966 CGB7P0DN87 165 aa1.83□□□□□ -2.12
SKP1-212ENST00000523966 S100A11P31949 105 aa1.83□□□□□ -2.12
SKP1-212ENST00000523966 EFNA4P52798 201 aa1.83□□□□□ -2.12
SKP1-212ENST00000523966 AKR1C2P52895 323 aa1.83□□□□□ -2.12
SKP1-212ENST00000523966 NKX2-5P52952 324 aaPredicted RBP1.83□□□□□ -2.12
SKP1-212ENST00000523966 RAB14P61106 215 aa1.83□□□□□ -2.12
SKP1-212ENST00000523966 EDDM3AQ14507 147 aa1.83□□□□□ -2.12
SKP1-212ENST00000523966 RTL8BQ17RB0 113 aa1.83□□□□□ -2.12
SKP1-212ENST00000523966 IAH1Q2TAA2 248 aaPredicted RBP1.83□□□□□ -2.12
SKP1-212ENST00000523966 TMEM155Q4W5P6 130 aa1.83□□□□□ -2.12
SKP1-212ENST00000523966 MORN2Q502X0 79 aa1.83□□□□□ -2.12
SKP1-212ENST00000523966 C10orf91Q5T1B1 145 aa1.83□□□□□ -2.12
SKP1-212ENST00000523966 HEPN1Q6WQI6 88 aa1.83□□□□□ -2.12
SKP1-212ENST00000523966 ZNF818PQ6ZRF7 136 aa1.83□□□□□ -2.12
SKP1-212ENST00000523966 SLC51BQ86UW2 128 aa1.83□□□□□ -2.12
SKP1-212ENST00000523966 C9orf62Q8N4C0 152 aa1.83□□□□□ -2.12
SKP1-212ENST00000523966 Q8NAQ8 132 aa1.83□□□□□ -2.12
SKP1-212ENST00000523966 DEFB108BQ8NET1 73 aa1.83□□□□□ -2.12
SKP1-212ENST00000523966 OR8B3Q8NGG8 313 aa1.83□□□□□ -2.12
SKP1-212ENST00000523966 OR51H1Q8NH63 302 aa1.83□□□□□ -2.12
SKP1-212ENST00000523966 RNASE11Q8TAA1 199 aaKnown RBP1.83□□□□□ -2.12
SKP1-212ENST00000523966 ZNF714Q96N38 554 aa1.83□□□□□ -2.12
SKP1-212ENST00000523966 GAFA1Q96PS6 74 aa1.83□□□□□ -2.12
SKP1-212ENST00000523966 CCL13Q99616 98 aa1.83□□□□□ -2.12
SKP1-212ENST00000523966 FXYD6Q9H0Q3 95 aa1.83□□□□□ -2.12
SKP1-212ENST00000523966 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.83□□□□□ -2.12
SKP1-212ENST00000523966 COA4Q9NYJ1 87 aa1.83□□□□□ -2.12
SKP1-212ENST00000523966 FKBP11Q9NYL4 201 aa1.83□□□□□ -2.12
SKP1-212ENST00000523966 GSKIPQ9P0R6 139 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 273.3 ms