RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 CCL18P55774 89 aa12.08□□□□□ -0.48
CCNC-213ENST00000523541 OR5I1Q13606 314 aa12.08□□□□□ -0.48
CCNC-213ENST00000523541 Q6AWC8 147 aa12.08□□□□□ -0.48
CCNC-213ENST00000523541 OR2T35Q8NGX2 323 aa12.08□□□□□ -0.48
CCNC-213ENST00000523541 RAB24Q969Q5 203 aa12.08□□□□□ -0.48
CCNC-213ENST00000523541 ST6GAL2Q96JF0 529 aa12.08□□□□□ -0.48
CCNC-213ENST00000523541 TAAR5O14804 337 aa12.07□□□□□ -0.48
CCNC-213ENST00000523541 SPINK4O60575 86 aa12.07□□□□□ -0.48
CCNC-213ENST00000523541 SOHLH1Q5JUK2 328 aa12.07□□□□□ -0.48
CCNC-213ENST00000523541 HYLS1Q96M11 299 aa12.07□□□□□ -0.48
CCNC-213ENST00000523541 ARPC5LQ9BPX5 153 aa12.07□□□□□ -0.48
CCNC-213ENST00000523541 ACTR3CQ9C0K3 210 aaPredicted RBP12.07□□□□□ -0.48
CCNC-213ENST00000523541 TMEM167BQ9NRX6 74 aa12.07□□□□□ -0.48
CCNC-213ENST00000523541 TP53TG3Q9ULZ0 132 aa12.07□□□□□ -0.48
CCNC-213ENST00000523541 HECTD4Q9Y4D8 3996 aa12.07□□□□□ -0.48
CCNC-213ENST00000523541 KLF12Q9Y4X4 402 aa12.07□□□□□ -0.48
CCNC-213ENST00000523541 TRGV2A0A075B6R0 118 aa12.06□□□□□ -0.48
CCNC-213ENST00000523541 RNF222A6NCQ9 220 aa12.06□□□□□ -0.48
CCNC-213ENST00000523541 PRSS29PA6NIE9 313 aa12.06□□□□□ -0.48
CCNC-213ENST00000523541 CXorf1O96002 111 aa12.06□□□□□ -0.48
CCNC-213ENST00000523541 PRR9Q5T870 116 aa12.06□□□□□ -0.48
CCNC-213ENST00000523541 Q6ZR54 194 aa12.06□□□□□ -0.48
CCNC-213ENST00000523541 Q6ZTI0 123 aa12.06□□□□□ -0.48
CCNC-213ENST00000523541 DNAH17Q9UFH2 4485 aa12.05□□□□□ -0.48
CCNC-213ENST00000523541 FAT2Q9NYQ8 4349 aa12.05□□□□□ -0.48
CCNC-213ENST00000523541 TRAV26-1A0A087WT03 109 aa12.05□□□□□ -0.48
CCNC-213ENST00000523541 FXYD6-FXYD2A0A087WZ82 144 aa12.05□□□□□ -0.48
CCNC-213ENST00000523541 FBLL1A6NHQ2 334 aaKnown RBP12.05□□□□□ -0.48
CCNC-213ENST00000523541 ARL14EPLP0DKL9 152 aa12.05□□□□□ -0.48
CCNC-213ENST00000523541 SLAQ13239 276 aa12.05□□□□□ -0.48
CCNC-213ENST00000523541 TDRG1Q3Y452 100 aa12.05□□□□□ -0.48
CCNC-213ENST00000523541 Q8TAT8 98 aa12.05□□□□□ -0.48
CCNC-213ENST00000523541 TRGV1A0A0A0MS02 117 aa12.04□□□□□ -0.48
CCNC-213ENST00000523541 K7EQM0 130 aa12.04□□□□□ -0.48
CCNC-213ENST00000523541 GCHFRP30047 84 aa12.04□□□□□ -0.48
CCNC-213ENST00000523541 ZNF415Q09FC8 603 aa12.04□□□□□ -0.48
CCNC-213ENST00000523541 FAM159AQ6UWV7 190 aa12.04□□□□□ -0.48
CCNC-213ENST00000523541 C5orf17Q8NAS9 161 aa12.04□□□□□ -0.48
CCNC-213ENST00000523541 SPXQ9BT56 116 aa12.04□□□□□ -0.48
CCNC-213ENST00000523541 TRGV11A0A075B6L2 103 aa12.03□□□□□ -0.48
CCNC-213ENST00000523541 A0A0J9YY99 117 aa12.03□□□□□ -0.48
CCNC-213ENST00000523541 HMGB3O15347 200 aaKnown RBP12.03□□□□□ -0.48
CCNC-213ENST00000523541 HOXA5P20719 270 aa12.03□□□□□ -0.48
CCNC-213ENST00000523541 RPL7L1Q6DKI1 246 aaKnown RBP12.03□□□□□ -0.48
CCNC-213ENST00000523541 GOLT1AQ6ZVE7 132 aa12.03□□□□□ -0.48
CCNC-213ENST00000523541 TRAV21A0A0B4J279 112 aa12.02□□□□□ -0.49
CCNC-213ENST00000523541 EIF3GO75821 320 aaKnown RBP eCLIP12.02□□□□□ -0.49
CCNC-213ENST00000523541 C1orf134Q5TEV5 83 aa12.02□□□□□ -0.49
CCNC-213ENST00000523541 ZNRF2Q8NHG8 242 aa12.02□□□□□ -0.49
CCNC-213ENST00000523541 NDFIP1Q9BT67 221 aa12.02□□□□□ -0.49
CCNC-213ENST00000523541 NKX6-2Q9C056 277 aaPredicted RBP12.02□□□□□ -0.49
CCNC-213ENST00000523541 SH3BGRL3Q9H299 93 aa12.02□□□□□ -0.49
CCNC-213ENST00000523541 TMPRSS5Q9H3S3 457 aa12.02□□□□□ -0.49
CCNC-213ENST00000523541 TREM1Q9NP99 234 aa12.02□□□□□ -0.49
CCNC-213ENST00000523541 A0A1W2PRE2 83 aa12.01□□□□□ -0.49
CCNC-213ENST00000523541 RTL8CO15255 209 aa12.01□□□□□ -0.49
CCNC-213ENST00000523541 TCRAP04437 139 aa12.01□□□□□ -0.49
CCNC-213ENST00000523541 RASL10AQ92737 203 aa12.01□□□□□ -0.49
CCNC-213ENST00000523541 KCNS1Q96KK3 526 aa12.01□□□□□ -0.49
CCNC-213ENST00000523541 CTXND1A0A1B0GTU2 59 aa12□□□□□ -0.49
CCNC-213ENST00000523541 G3V3Q6 166 aa12□□□□□ -0.49
CCNC-213ENST00000523541 SUMO1P63165 101 aaKnown RBP12□□□□□ -0.49
CCNC-213ENST00000523541 Q6ZQT7 251 aa12□□□□□ -0.49
CCNC-213ENST00000523541 SSX7Q7RTT5 188 aa12□□□□□ -0.49
CCNC-213ENST00000523541 IQCF2Q8IXL9 164 aa12□□□□□ -0.49
CCNC-213ENST00000523541 EPDR1Q9UM22 224 aa12□□□□□ -0.49
CCNC-213ENST00000523541 RPH3ALQ9UNE2 315 aa12□□□□□ -0.49
CCNC-213ENST00000523541 LINC00588Q9Y4M8 146 aa12□□□□□ -0.49
CCNC-213ENST00000523541 MUC21Q5SSG8 566 aa11.99□□□□□ -0.49
CCNC-213ENST00000523541 AKR1C8PQ5T2L2 129 aa11.99□□□□□ -0.49
CCNC-213ENST00000523541 UPK3BQ9BT76 320 aa11.99□□□□□ -0.49
CCNC-213ENST00000523541 PRO0255Q9UI72 69 aa11.99□□□□□ -0.49
CCNC-213ENST00000523541 NBDYA0A0U1RRE5 68 aa11.98□□□□□ -0.49
CCNC-213ENST00000523541 ARPC5O15511 151 aa11.98□□□□□ -0.49
CCNC-213ENST00000523541 ZNF345Q14585 488 aa11.98□□□□□ -0.49
CCNC-213ENST00000523541 SAPCD1Q5SSQ6 148 aa11.98□□□□□ -0.49
CCNC-213ENST00000523541 TVP23CQ96ET8 276 aa11.98□□□□□ -0.49
CCNC-213ENST00000523541 VSIG2Q96IQ7 327 aa11.98□□□□□ -0.49
CCNC-213ENST00000523541 Q9H8V8 135 aa11.98□□□□□ -0.49
CCNC-213ENST00000523541 MDFICQ9P1T7 246 aa11.98□□□□□ -0.49
CCNC-213ENST00000523541 NACAE9PAV3 2078 aa11.98□□□□□ -0.49
CCNC-213ENST00000523541 TRAV8-1A0A0A6YYK1 113 aa11.97□□□□□ -0.49
CCNC-213ENST00000523541 HMSDA8MTL9 139 aa11.97□□□□□ -0.49
CCNC-213ENST00000523541 BTF3P20290 206 aaKnown RBP11.97□□□□□ -0.49
CCNC-213ENST00000523541 GNG5P63218 68 aa11.97□□□□□ -0.49
CCNC-213ENST00000523541 TMEM183BQ1AE95 376 aa11.97□□□□□ -0.49
CCNC-213ENST00000523541 TMEM183AQ8IXX5 376 aa11.97□□□□□ -0.49
CCNC-213ENST00000523541 CYB561D1Q8N8Q1 229 aa11.97□□□□□ -0.49
CCNC-213ENST00000523541 TMEM75Q8N9X5 138 aa11.97□□□□□ -0.49
CCNC-213ENST00000523541 CYTL1Q9NRR1 136 aa11.97□□□□□ -0.49
CCNC-213ENST00000523541 PSG8Q9UQ74 426 aa11.97□□□□□ -0.49
CCNC-213ENST00000523541 HHLA3Q9XRX5 114 aa11.97□□□□□ -0.49
CCNC-213ENST00000523541 PAX4O43316 350 aa11.96□□□□□ -0.49
CCNC-213ENST00000523541 FLI1Q01543 452 aaPredicted RBP11.96□□□□□ -0.49
CCNC-213ENST00000523541 ESRGQ1W209 222 aa11.96□□□□□ -0.49
CCNC-213ENST00000523541 SDF2L1Q9HCN8 221 aa11.96□□□□□ -0.49
CCNC-213ENST00000523541 MRPL16Q9NX20 251 aaKnown RBP11.96□□□□□ -0.49
CCNC-213ENST00000523541 MRPS16Q9Y3D3 137 aaKnown RBP11.96□□□□□ -0.49
CCNC-213ENST00000523541 A0A096LPF7 62 aa11.95□□□□□ -0.5
CCNC-213ENST00000523541 A0A0D9SG52 128 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms