RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 MCRIP2Q9BUT9 160 aaKnown RBP10.27□□□□□ -0.76
PCDHGB1-201ENST00000523390 TOMM7Q9P0U1 55 aa10.27□□□□□ -0.76
PCDHGB1-201ENST00000523390 PRRC2AP48634 2157 aaKnown RBP10.27□□□□□ -0.77
PCDHGB1-201ENST00000523390 LINC01619G3V211 115 aa10.27□□□□□ -0.77
PCDHGB1-201ENST00000523390 ZNF876PQ49A33 203 aa10.27□□□□□ -0.77
PCDHGB1-201ENST00000523390 ZC2HC1AQ96GY0 325 aa10.27□□□□□ -0.77
PCDHGB1-201ENST00000523390 XCL2Q9UBD3 114 aa10.27□□□□□ -0.77
PCDHGB1-201ENST00000523390 IGLV11-55A0A075B6I3 123 aa10.26□□□□□ -0.77
PCDHGB1-201ENST00000523390 FABP2P12104 132 aa10.26□□□□□ -0.77
PCDHGB1-201ENST00000523390 C1orf229Q6ZS94 237 aaPredicted RBP10.26□□□□□ -0.77
PCDHGB1-201ENST00000523390 TEX22C9J3V5 150 aa10.26□□□□□ -0.77
PCDHGB1-201ENST00000523390 K7EN84 100 aa10.26□□□□□ -0.77
PCDHGB1-201ENST00000523390 CIRBPQ14011 172 aaKnown RBP10.26□□□□□ -0.77
PCDHGB1-201ENST00000523390 KNCNA6PVL3 124 aa10.25□□□□□ -0.77
PCDHGB1-201ENST00000523390 DPM2O94777 84 aa10.25□□□□□ -0.77
PCDHGB1-201ENST00000523390 ELANEP08246 267 aa10.25□□□□□ -0.77
PCDHGB1-201ENST00000523390 ZNF415Q09FC8 603 aa10.25□□□□□ -0.77
PCDHGB1-201ENST00000523390 LAGE3Q14657 143 aa10.25□□□□□ -0.77
PCDHGB1-201ENST00000523390 DEFB136Q30KP8 78 aa10.25□□□□□ -0.77
PCDHGB1-201ENST00000523390 FAM231DQ6ZW35 169 aa10.25□□□□□ -0.77
PCDHGB1-201ENST00000523390 GFRA4Q9GZZ7 299 aa10.25□□□□□ -0.77
PCDHGB1-201ENST00000523390 C11orf1Q9H5F2 150 aa10.25□□□□□ -0.77
PCDHGB1-201ENST00000523390 KLK9Q9UKQ9 250 aa10.25□□□□□ -0.77
PCDHGB1-201ENST00000523390 ZNF462Q96JM2 2506 aa10.25□□□□□ -0.77
PCDHGB1-201ENST00000523390 TRAV12-2A0A075B6T6 113 aa10.25□□□□□ -0.77
PCDHGB1-201ENST00000523390 F6UB75 175 aa10.25□□□□□ -0.77
PCDHGB1-201ENST00000523390 P0C879 139 aa10.25□□□□□ -0.77
PCDHGB1-201ENST00000523390 COTL1Q14019 142 aa10.25□□□□□ -0.77
PCDHGB1-201ENST00000523390 IGHV7-4-1A0A0J9YVY3 117 aa10.25□□□□□ -0.77
PCDHGB1-201ENST00000523390 DLEU1O43261 78 aa10.25□□□□□ -0.77
PCDHGB1-201ENST00000523390 SLAQ13239 276 aa10.25□□□□□ -0.77
PCDHGB1-201ENST00000523390 CT83Q5H943 113 aa10.25□□□□□ -0.77
PCDHGB1-201ENST00000523390 C18orf32Q8TCD1 76 aa10.25□□□□□ -0.77
PCDHGB1-201ENST00000523390 SIRPDQ9H106 197 aa10.25□□□□□ -0.77
PCDHGB1-201ENST00000523390 INSP01308 110 aa10.24□□□□□ -0.77
PCDHGB1-201ENST00000523390 CTSGP08311 255 aa10.24□□□□□ -0.77
PCDHGB1-201ENST00000523390 LMO4P61968 165 aa10.24□□□□□ -0.77
PCDHGB1-201ENST00000523390 MRAP2Q96G30 205 aa10.24□□□□□ -0.77
PCDHGB1-201ENST00000523390 RNF114Q9Y508 228 aa10.24□□□□□ -0.77
PCDHGB1-201ENST00000523390 LAMTOR2Q9Y2Q5 125 aa10.24□□□□□ -0.77
PCDHGB1-201ENST00000523390 CD28P10747 220 aa10.24□□□□□ -0.77
PCDHGB1-201ENST00000523390 MRPL27Q9P0M9 148 aaKnown RBP10.24□□□□□ -0.77
PCDHGB1-201ENST00000523390 HCFC1P51610 2035 aa10.24□□□□□ -0.77
PCDHGB1-201ENST00000523390 TYMSP04818 313 aa10.24□□□□□ -0.77
PCDHGB1-201ENST00000523390 NPSP0C0P6 89 aa10.24□□□□□ -0.77
PCDHGB1-201ENST00000523390 CMC4P56277 68 aaPredicted RBP10.24□□□□□ -0.77
PCDHGB1-201ENST00000523390 FAM231BA6NCW3 169 aa10.23□□□□□ -0.77
PCDHGB1-201ENST00000523390 TMEM158Q8WZ71 300 aa10.23□□□□□ -0.77
PCDHGB1-201ENST00000523390 MS4A6AQ9H2W1 248 aa10.23□□□□□ -0.77
PCDHGB1-201ENST00000523390 POLQO75417 2590 aa10.23□□□□□ -0.77
PCDHGB1-201ENST00000523390 CD300EQ496F6 205 aaPredicted RBP10.23□□□□□ -0.77
PCDHGB1-201ENST00000523390 DYNAPQ8N1N2 210 aa10.23□□□□□ -0.77
PCDHGB1-201ENST00000523390 CSTL1Q9H114 145 aa10.23□□□□□ -0.77
PCDHGB1-201ENST00000523390 MTORP42345 2549 aa10.23□□□□□ -0.77
PCDHGB1-201ENST00000523390 C5orf56Q8N8D9 126 aa10.23□□□□□ -0.77
PCDHGB1-201ENST00000523390 NUPR1O60356 82 aa10.23□□□□□ -0.77
PCDHGB1-201ENST00000523390 GP9P14770 177 aa10.22□□□□□ -0.77
PCDHGB1-201ENST00000523390 ANXA2RQ3ZCQ2 193 aa10.22□□□□□ -0.77
PCDHGB1-201ENST00000523390 OR2K2Q8NGT1 345 aa10.22□□□□□ -0.77
PCDHGB1-201ENST00000523390 CHCHD5Q9BSY4 110 aa10.22□□□□□ -0.77
PCDHGB1-201ENST00000523390 LINC00574Q9H8X3 128 aa10.22□□□□□ -0.77
PCDHGB1-201ENST00000523390 SMPXQ9UHP9 88 aa10.22□□□□□ -0.77
PCDHGB1-201ENST00000523390 CHTOPQ9Y3Y2 248 aaKnown RBP10.22□□□□□ -0.77
PCDHGB1-201ENST00000523390 FN1P02751 2386 aaKnown RBP10.22□□□□□ -0.77
PCDHGB1-201ENST00000523390 XIRP2A4UGR9 3374 aa10.22□□□□□ -0.77
PCDHGB1-201ENST00000523390 hDV102S1A0JD36 115 aa10.22□□□□□ -0.77
PCDHGB1-201ENST00000523390 TNFRSF6BO95407 300 aa10.22□□□□□ -0.77
PCDHGB1-201ENST00000523390 FAM104BQ5XKR9 115 aa10.22□□□□□ -0.77
PCDHGB1-201ENST00000523390 FAM167A-AS1Q96KT0 104 aa10.22□□□□□ -0.77
PCDHGB1-201ENST00000523390 AGPAT4-IT1Q9H0P7 198 aa10.22□□□□□ -0.77
PCDHGB1-201ENST00000523390 APOMO95445 188 aa10.22□□□□□ -0.77
PCDHGB1-201ENST00000523390 COX6CP09669 75 aa10.22□□□□□ -0.77
PCDHGB1-201ENST00000523390 ZNF295-AS1Q8N0V1 137 aa10.22□□□□□ -0.77
PCDHGB1-201ENST00000523390 IGKCP01834 107 aa10.21□□□□□ -0.77
PCDHGB1-201ENST00000523390 HOXD3P31249 432 aaPredicted RBP10.21□□□□□ -0.77
PCDHGB1-201ENST00000523390 CDSNQ15517 529 aa10.21□□□□□ -0.77
PCDHGB1-201ENST00000523390 CHD9Q3L8U1 2897 aa10.21□□□□□ -0.77
PCDHGB1-201ENST00000523390 IGHV3-64A0A075B6Q5 118 aa10.21□□□□□ -0.77
PCDHGB1-201ENST00000523390 Q0VG73 95 aa10.21□□□□□ -0.77
PCDHGB1-201ENST00000523390 Q6ZWC4 215 aa10.21□□□□□ -0.77
PCDHGB1-201ENST00000523390 SMIM27A0A1W2PRY6 76 aa10.21□□□□□ -0.78
PCDHGB1-201ENST00000523390 PRSS46E5RG02 174 aa10.21□□□□□ -0.78
PCDHGB1-201ENST00000523390 H3BUA1 57 aa10.21□□□□□ -0.78
PCDHGB1-201ENST00000523390 TDRG1Q3Y452 100 aa10.21□□□□□ -0.78
PCDHGB1-201ENST00000523390 AJUBAQ96IF1 538 aa10.21□□□□□ -0.78
PCDHGB1-201ENST00000523390 H3BRM9 83 aa10.21□□□□□ -0.78
PCDHGB1-201ENST00000523390 PRSS57Q6UWY2 283 aa10.21□□□□□ -0.78
PCDHGB1-201ENST00000523390 SYS1-DBNDD2H3BUS1 97 aa10.2□□□□□ -0.78
PCDHGB1-201ENST00000523390 YPEL4Q96NS1 127 aa10.2□□□□□ -0.78
PCDHGB1-201ENST00000523390 VCYO14598 125 aa10.2□□□□□ -0.78
PCDHGB1-201ENST00000523390 SMIM13P0DJ93 91 aa10.2□□□□□ -0.78
PCDHGB1-201ENST00000523390 BCL6BQ8N143 479 aaPredicted RBP10.2□□□□□ -0.78
PCDHGB1-201ENST00000523390 PHLDA1Q8WV24 401 aaPredicted RBP10.2□□□□□ -0.78
PCDHGB1-201ENST00000523390 PKD1L2Q7Z442 2459 aa10.2□□□□□ -0.78
PCDHGB1-201ENST00000523390 LTAP01374 205 aa10.19□□□□□ -0.78
PCDHGB1-201ENST00000523390 DEFB130BP0DP73 79 aa10.19□□□□□ -0.78
PCDHGB1-201ENST00000523390 DEFB130AP0DP74 79 aa10.19□□□□□ -0.78
PCDHGB1-201ENST00000523390 RPL36AP83881 106 aaKnown RBP10.19□□□□□ -0.78
PCDHGB1-201ENST00000523390 C3orf56Q8N813 242 aa10.19□□□□□ -0.78
PCDHGB1-201ENST00000523390 RPL36ALQ969Q0 106 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms