RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 CSPG4Q6UVK1 2322 aa8.23□□□□□ -1.09
RAB11FIP1-204ENST00000522774 IGKV3D-20A0A0C4DH25 116 aa8.23□□□□□ -1.09
RAB11FIP1-204ENST00000522774 NDUFS8O00217 210 aa8.23□□□□□ -1.09
RAB11FIP1-204ENST00000522774 SMAD7O15105 426 aaKnown RBP8.23□□□□□ -1.09
RAB11FIP1-204ENST00000522774 NPYP01303 97 aa8.23□□□□□ -1.09
RAB11FIP1-204ENST00000522774 A6NDX4 124 aa8.23□□□□□ -1.09
RAB11FIP1-204ENST00000522774 GAS8-AS1O95177 125 aa8.23□□□□□ -1.09
RAB11FIP1-204ENST00000522774 IGHV3-11P01762 117 aa8.23□□□□□ -1.09
RAB11FIP1-204ENST00000522774 IGF1P05019 195 aa8.23□□□□□ -1.09
RAB11FIP1-204ENST00000522774 BLCAPP62952 87 aa8.23□□□□□ -1.09
RAB11FIP1-204ENST00000522774 LCNL1Q6ZST4 164 aa8.23□□□□□ -1.09
RAB11FIP1-204ENST00000522774 OR10AG1Q8NH19 301 aa8.23□□□□□ -1.09
RAB11FIP1-204ENST00000522774 GLMPQ8WWB7 406 aa8.23□□□□□ -1.09
RAB11FIP1-204ENST00000522774 RNF185Q96GF1 192 aa8.23□□□□□ -1.09
RAB11FIP1-204ENST00000522774 TMEM191AQ9H0A3 160 aa8.23□□□□□ -1.09
RAB11FIP1-204ENST00000522774 KLK15Q9H2R5 256 aa8.23□□□□□ -1.09
RAB11FIP1-204ENST00000522774 AVPP01185 164 aa8.22□□□□□ -1.09
RAB11FIP1-204ENST00000522774 MSMBP08118 114 aa8.22□□□□□ -1.09
RAB11FIP1-204ENST00000522774 CKS2P33552 79 aa8.22□□□□□ -1.09
RAB11FIP1-204ENST00000522774 HINT1P49773 126 aaPredicted RBP8.22□□□□□ -1.09
RAB11FIP1-204ENST00000522774 C20orf173Q96LM9 149 aa8.22□□□□□ -1.09
RAB11FIP1-204ENST00000522774 ZFYVE26Q68DK2 2539 aa8.22□□□□□ -1.09
RAB11FIP1-204ENST00000522774 IGHG2P01859 326 aa8.22□□□□□ -1.09
RAB11FIP1-204ENST00000522774 COL5A1-AS1Q5SY13 56 aa8.22□□□□□ -1.09
RAB11FIP1-204ENST00000522774 TMEM78Q5T7P6 136 aa8.22□□□□□ -1.09
RAB11FIP1-204ENST00000522774 LINC01545Q5VT33 79 aa8.22□□□□□ -1.09
RAB11FIP1-204ENST00000522774 CYB5R2Q6BCY4 276 aa8.22□□□□□ -1.09
RAB11FIP1-204ENST00000522774 CNFNQ9BYD5 112 aa8.22□□□□□ -1.09
RAB11FIP1-204ENST00000522774 MRPS16Q9Y3D3 137 aaKnown RBP8.22□□□□□ -1.09
RAB11FIP1-204ENST00000522774 CIDEAO60543 219 aa8.21□□□□□ -1.09
RAB11FIP1-204ENST00000522774 FOXE3Q13461 319 aa8.21□□□□□ -1.09
RAB11FIP1-204ENST00000522774 PRSS57Q6UWY2 283 aa8.21□□□□□ -1.09
RAB11FIP1-204ENST00000522774 GPHB5Q86YW7 130 aa8.21□□□□□ -1.09
RAB11FIP1-204ENST00000522774 MRPL53Q96EL3 112 aaKnown RBP8.21□□□□□ -1.09
RAB11FIP1-204ENST00000522774 C16orf92Q96LL3 132 aa8.21□□□□□ -1.09
RAB11FIP1-204ENST00000522774 TMEM208Q9BTX3 173 aa8.21□□□□□ -1.09
RAB11FIP1-204ENST00000522774 ST20Q9HBF5 79 aa8.21□□□□□ -1.09
RAB11FIP1-204ENST00000522774 ATP6V0BQ99437 205 aa8.21□□□□□ -1.1
RAB11FIP1-204ENST00000522774 HIF1ANQ9NWT6 349 aa8.21□□□□□ -1.1
RAB11FIP1-204ENST00000522774 PRR9Q5T870 116 aa8.21□□□□□ -1.1
RAB11FIP1-204ENST00000522774 C9orf47Q6ZRZ4 202 aa8.21□□□□□ -1.1
RAB11FIP1-204ENST00000522774 DEFB1P60022 68 aa8.2□□□□□ -1.1
RAB11FIP1-204ENST00000522774 OR8A1Q8NGG7 326 aa8.2□□□□□ -1.1
RAB11FIP1-204ENST00000522774 PF4V1P10720 104 aa8.2□□□□□ -1.1
RAB11FIP1-204ENST00000522774 HIST1H1AQ02539 215 aaPredicted RBP8.2□□□□□ -1.1
RAB11FIP1-204ENST00000522774 SELENOKQ9Y6D0 94 aa8.2□□□□□ -1.1
RAB11FIP1-204ENST00000522774 ZANQ9Y493 2812 aa8.2□□□□□ -1.1
RAB11FIP1-204ENST00000522774 USP9YO00507 2555 aaPredicted RBP8.2□□□□□ -1.1
RAB11FIP1-204ENST00000522774 POLQO75417 2590 aa8.2□□□□□ -1.1
RAB11FIP1-204ENST00000522774 NDUFA4O00483 81 aa8.19□□□□□ -1.1
RAB11FIP1-204ENST00000522774 GATA1P15976 413 aaPredicted RBP8.19□□□□□ -1.1
RAB11FIP1-204ENST00000522774 FBN2P35556 2912 aa8.19□□□□□ -1.1
RAB11FIP1-204ENST00000522774 CENPEQ02224 2701 aa8.19□□□□□ -1.1
RAB11FIP1-204ENST00000522774 IGHV7-4-1A0A0J9YVY3 117 aa8.19□□□□□ -1.1
RAB11FIP1-204ENST00000522774 ZNF738Q8NE65 137 aa8.19□□□□□ -1.1
RAB11FIP1-204ENST00000522774 SCRT2Q9NQ03 307 aa8.19□□□□□ -1.1
RAB11FIP1-204ENST00000522774 HSBP1L1C9JCN9 74 aa8.18□□□□□ -1.1
RAB11FIP1-204ENST00000522774 DLEU1O43261 78 aa8.18□□□□□ -1.1
RAB11FIP1-204ENST00000522774 EVI2AP22794 236 aa8.18□□□□□ -1.1
RAB11FIP1-204ENST00000522774 C9orf139Q6ZV77 190 aa8.18□□□□□ -1.1
RAB11FIP1-204ENST00000522774 OR4X2Q8NGF9 303 aa8.18□□□□□ -1.1
RAB11FIP1-204ENST00000522774 SOCS3O14543 225 aa8.18□□□□□ -1.1
RAB11FIP1-204ENST00000522774 TCF21O43680 179 aa8.18□□□□□ -1.1
RAB11FIP1-204ENST00000522774 NPSP0C0P6 89 aa8.18□□□□□ -1.1
RAB11FIP1-204ENST00000522774 USP24Q9UPU5 2620 aa8.18□□□□□ -1.1
RAB11FIP1-204ENST00000522774 FAM208BQ5VWN6 2430 aa8.18□□□□□ -1.1
RAB11FIP1-204ENST00000522774 B4DSR2 109 aa8.18□□□□□ -1.1
RAB11FIP1-204ENST00000522774 HBDP02042 147 aa8.18□□□□□ -1.1
RAB11FIP1-204ENST00000522774 Q6ZVH6 145 aa8.18□□□□□ -1.1
RAB11FIP1-204ENST00000522774 USMG5Q96IX5 58 aa8.18□□□□□ -1.1
RAB11FIP1-204ENST00000522774 ANKRD17O75179 2603 aaKnown RBP8.17□□□□□ -1.1
RAB11FIP1-204ENST00000522774 IGKV3-7A0A075B6H7 116 aa8.17□□□□□ -1.1
RAB11FIP1-204ENST00000522774 H3BUA1 57 aa8.17□□□□□ -1.1
RAB11FIP1-204ENST00000522774 SLC25A34Q6PIV7 304 aa8.17□□□□□ -1.1
RAB11FIP1-204ENST00000522774 WFDC3Q8IUB2 231 aa8.17□□□□□ -1.1
RAB11FIP1-204ENST00000522774 ZNF462Q96JM2 2506 aa8.17□□□□□ -1.1
RAB11FIP1-204ENST00000522774 TNFRSF6BO95407 300 aa8.17□□□□□ -1.1
RAB11FIP1-204ENST00000522774 BRI3O95415 125 aa8.17□□□□□ -1.1
RAB11FIP1-204ENST00000522774 IGLV1-40P01703 118 aa8.17□□□□□ -1.1
RAB11FIP1-204ENST00000522774 PRB1P04280 392 aa8.17□□□□□ -1.1
RAB11FIP1-204ENST00000522774 EDN2P20800 178 aa8.17□□□□□ -1.1
RAB11FIP1-204ENST00000522774 NPFFR1Q9GZQ6 430 aa8.17□□□□□ -1.1
RAB11FIP1-204ENST00000522774 TM4SF20Q53R12 229 aa8.16□□□□□ -1.1
RAB11FIP1-204ENST00000522774 MAP1LC3AQ9H492 121 aa8.16□□□□□ -1.1
RAB11FIP1-204ENST00000522774 LRRK2Q5S007 2527 aa8.16□□□□□ -1.1
RAB11FIP1-204ENST00000522774 TMEM8BA6NDV4 472 aa8.16□□□□□ -1.1
RAB11FIP1-204ENST00000522774 F6UB75 175 aa8.16□□□□□ -1.1
RAB11FIP1-204ENST00000522774 PPBPP02775 128 aa8.16□□□□□ -1.1
RAB11FIP1-204ENST00000522774 RPL11P62913 178 aaKnown RBP8.16□□□□□ -1.1
RAB11FIP1-204ENST00000522774 CACNG7P62955 275 aa8.16□□□□□ -1.1
RAB11FIP1-204ENST00000522774 CFHR3Q02985 330 aa8.16□□□□□ -1.1
RAB11FIP1-204ENST00000522774 MPV17L2Q567V2 206 aa8.16□□□□□ -1.1
RAB11FIP1-204ENST00000522774 MS4A6AQ9H2W1 248 aa8.16□□□□□ -1.1
RAB11FIP1-204ENST00000522774 GOLT1BQ9Y3E0 138 aa8.16□□□□□ -1.1
RAB11FIP1-204ENST00000522774 H3BVH4 76 aa8.16□□□□□ -1.1
RAB11FIP1-204ENST00000522774 ZFAND2AQ8N6M9 145 aa8.16□□□□□ -1.1
RAB11FIP1-204ENST00000522774 TRAV26-2A0A0B4J265 109 aa8.15□□□□□ -1.1
RAB11FIP1-204ENST00000522774 SPRY2O43597 315 aa8.15□□□□□ -1.1
RAB11FIP1-204ENST00000522774 IGHV4-59P01825 116 aa8.15□□□□□ -1.1
RAB11FIP1-204ENST00000522774 ODF1Q14990 250 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms