RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 BCAP31P51572 246 aa4.22□□□□□ -1.73
PABPC1-220ENST00000522658 UBE2MP61081 183 aaKnown RBP4.22□□□□□ -1.73
PABPC1-220ENST00000522658 BAXQ07812 192 aa4.22□□□□□ -1.73
PABPC1-220ENST00000522658 PPP1R1AQ13522 171 aa4.22□□□□□ -1.73
PABPC1-220ENST00000522658 ZNF846Q147U1 533 aa4.22□□□□□ -1.73
PABPC1-220ENST00000522658 ANXA2RQ3ZCQ2 193 aa4.22□□□□□ -1.73
PABPC1-220ENST00000522658 OR10J3Q5JRS4 329 aa4.22□□□□□ -1.73
PABPC1-220ENST00000522658 WFDC10BQ8IUB3 73 aa4.22□□□□□ -1.73
PABPC1-220ENST00000522658 DYNC2LI1Q8TCX1 351 aa4.22□□□□□ -1.73
PABPC1-220ENST00000522658 LINC00477Q96M19 166 aa4.22□□□□□ -1.73
PABPC1-220ENST00000522658 ATP5SQ99766 215 aa4.22□□□□□ -1.73
PABPC1-220ENST00000522658 NAA50Q9GZZ1 169 aaKnown RBP4.22□□□□□ -1.73
PABPC1-220ENST00000522658 SLC25A31Q9H0C2 315 aa4.22□□□□□ -1.73
PABPC1-220ENST00000522658 MIXL1Q9H2W2 232 aa4.22□□□□□ -1.73
PABPC1-220ENST00000522658 GPN1Q9HCN4 374 aaPredicted RBP4.22□□□□□ -1.73
PABPC1-220ENST00000522658 SLC39A9Q9NUM3 307 aa4.22□□□□□ -1.73
PABPC1-220ENST00000522658 RCL1Q9Y2P8 373 aaKnown RBP4.22□□□□□ -1.73
PABPC1-220ENST00000522658 IGHV1OR15-1A0A075B7D0 117 aa4.21□□□□□ -1.74
PABPC1-220ENST00000522658 LINC00854A0A1B0GVQ3 168 aa4.21□□□□□ -1.74
PABPC1-220ENST00000522658 PRAC2D3DTV9 90 aa4.21□□□□□ -1.74
PABPC1-220ENST00000522658 K7EPK0 472 aa4.21□□□□□ -1.74
PABPC1-220ENST00000522658 K7EQD1 137 aa4.21□□□□□ -1.74
PABPC1-220ENST00000522658 SPINK4O60575 86 aa4.21□□□□□ -1.74
PABPC1-220ENST00000522658 TSC22D2O75157 780 aa4.21□□□□□ -1.74
PABPC1-220ENST00000522658 ZNF253O75346 499 aa4.21□□□□□ -1.74
PABPC1-220ENST00000522658 PVALBP20472 110 aaPredicted RBP4.21□□□□□ -1.74
PABPC1-220ENST00000522658 S100A5P33763 92 aa4.21□□□□□ -1.74
PABPC1-220ENST00000522658 CSN1S1P47710 185 aa4.21□□□□□ -1.74
PABPC1-220ENST00000522658 CAV2P51636 162 aa4.21□□□□□ -1.74
PABPC1-220ENST00000522658 CRYBA4P53673 196 aa4.21□□□□□ -1.74
PABPC1-220ENST00000522658 OPCMLQ14982 345 aa4.21□□□□□ -1.74
PABPC1-220ENST00000522658 CTF1Q16619 201 aa4.21□□□□□ -1.74
PABPC1-220ENST00000522658 IAH1Q2TAA2 248 aaPredicted RBP4.21□□□□□ -1.74
PABPC1-220ENST00000522658 C4orf46Q504U0 113 aa4.21□□□□□ -1.74
PABPC1-220ENST00000522658 LYPD5Q6UWN5 251 aa4.21□□□□□ -1.74
PABPC1-220ENST00000522658 RAB2BQ8WUD1 216 aa4.21□□□□□ -1.74
PABPC1-220ENST00000522658 BLNKQ8WV28 456 aa4.21□□□□□ -1.74
PABPC1-220ENST00000522658 DEDD2Q8WXF8 326 aa4.21□□□□□ -1.74
PABPC1-220ENST00000522658 SMIM8Q96KF7 97 aa4.21□□□□□ -1.74
PABPC1-220ENST00000522658 GGACTQ9BVM4 153 aa4.21□□□□□ -1.74
PABPC1-220ENST00000522658 TM2D2Q9BX73 214 aa4.21□□□□□ -1.74
PABPC1-220ENST00000522658 MRPS26Q9BYN8 205 aaKnown RBP4.21□□□□□ -1.74
PABPC1-220ENST00000522658 C20orf85Q9H1P6 137 aa4.21□□□□□ -1.74
PABPC1-220ENST00000522658 DNAJC4Q9NNZ3 241 aa4.21□□□□□ -1.74
PABPC1-220ENST00000522658 GSKIPQ9P0R6 139 aa4.21□□□□□ -1.74
PABPC1-220ENST00000522658 KLF12Q9Y4X4 402 aa4.21□□□□□ -1.74
PABPC1-220ENST00000522658 HERC1Q15751 4861 aa4.21□□□□□ -1.74
PABPC1-220ENST00000522658 IGHV3-38A0A0C4DH36 116 aa4.2□□□□□ -1.74
PABPC1-220ENST00000522658 UBE2L5PA0A1B0GUS4 154 aa4.2□□□□□ -1.74
PABPC1-220ENST00000522658 MRPS12O15235 138 aaKnown RBP4.2□□□□□ -1.74
PABPC1-220ENST00000522658 SFTA3P0C7M3 94 aa4.2□□□□□ -1.74
PABPC1-220ENST00000522658 IGLC2P0DOY2 106 aa4.2□□□□□ -1.74
PABPC1-220ENST00000522658 TNFSF8P32971 234 aa4.2□□□□□ -1.74
PABPC1-220ENST00000522658 TAS2R30P59541 319 aa4.2□□□□□ -1.74
PABPC1-220ENST00000522658 ERCC8Q13216 396 aa4.2□□□□□ -1.74
PABPC1-220ENST00000522658 PDE6HQ13956 83 aa4.2□□□□□ -1.74
PABPC1-220ENST00000522658 TRIQKQ629K1 86 aa4.2□□□□□ -1.74
PABPC1-220ENST00000522658 FAM122CQ6P4D5 195 aa4.2□□□□□ -1.74
PABPC1-220ENST00000522658 FAM159AQ6UWV7 190 aa4.2□□□□□ -1.74
PABPC1-220ENST00000522658 PATE2Q6UY27 113 aa4.2□□□□□ -1.74
PABPC1-220ENST00000522658 NRARPQ7Z6K4 114 aa4.2□□□□□ -1.74
PABPC1-220ENST00000522658 STX12Q86Y82 276 aa4.2□□□□□ -1.74
PABPC1-220ENST00000522658 Q8N814 137 aa4.2□□□□□ -1.74
PABPC1-220ENST00000522658 C11orf72Q8NBR9 251 aa4.2□□□□□ -1.74
PABPC1-220ENST00000522658 OR4C5Q8NGB2 326 aa4.2□□□□□ -1.74
PABPC1-220ENST00000522658 SOSTQ9BQB4 213 aa4.2□□□□□ -1.74
PABPC1-220ENST00000522658 MRPL32Q9BYC8 188 aaKnown RBP4.2□□□□□ -1.74
PABPC1-220ENST00000522658 SH3BGRL3Q9H299 93 aa4.2□□□□□ -1.74
PABPC1-220ENST00000522658 UQCC1Q9NVA1 299 aa4.2□□□□□ -1.74
PABPC1-220ENST00000522658 NAGKQ9UJ70 344 aa4.2□□□□□ -1.74
PABPC1-220ENST00000522658 TRBV19A0A075B6N1 114 aa4.19□□□□□ -1.74
PABPC1-220ENST00000522658 IGKV2-40A0A087WW87 121 aaPredicted RBP4.19□□□□□ -1.74
PABPC1-220ENST00000522658 TRAV4A0A0B4J268 109 aa4.19□□□□□ -1.74
PABPC1-220ENST00000522658 CENPXA8MT69 81 aa4.19□□□□□ -1.74
PABPC1-220ENST00000522658 FAM25EA8MYX2 175 aa4.19□□□□□ -1.74
PABPC1-220ENST00000522658 KLLNB2CW77 178 aa4.19□□□□□ -1.74
PABPC1-220ENST00000522658 M0R3E3 92 aa4.19□□□□□ -1.74
PABPC1-220ENST00000522658 RS1O15537 224 aa4.19□□□□□ -1.74
PABPC1-220ENST00000522658 CCNKO75909 580 aa4.19□□□□□ -1.74
PABPC1-220ENST00000522658 IGKV2D-40P01614 121 aaPredicted RBP4.19□□□□□ -1.74
PABPC1-220ENST00000522658 HBG1P69891 147 aa4.19□□□□□ -1.74
PABPC1-220ENST00000522658 HBG2P69892 147 aa4.19□□□□□ -1.74
PABPC1-220ENST00000522658 CD300CQ08708 224 aa4.19□□□□□ -1.74
PABPC1-220ENST00000522658 SPCS2Q15005 226 aa4.19□□□□□ -1.74
PABPC1-220ENST00000522658 TDRG1Q3Y452 100 aa4.19□□□□□ -1.74
PABPC1-220ENST00000522658 MUC21Q5SSG8 566 aa4.19□□□□□ -1.74
PABPC1-220ENST00000522658 MIC13Q5XKP0 118 aa4.19□□□□□ -1.74
PABPC1-220ENST00000522658 TMEM14EPQ6UXP3 125 aa4.19□□□□□ -1.74
PABPC1-220ENST00000522658 TMEM37Q8WXS4 190 aa4.19□□□□□ -1.74
PABPC1-220ENST00000522658 MGST2Q99735 147 aa4.19□□□□□ -1.74
PABPC1-220ENST00000522658 PRADC1Q9BSG0 188 aa4.19□□□□□ -1.74
PABPC1-220ENST00000522658 SPXQ9BT56 116 aa4.19□□□□□ -1.74
PABPC1-220ENST00000522658 LSM5Q9Y4Y9 91 aaKnown RBP4.19□□□□□ -1.74
PABPC1-220ENST00000522658 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.18□□□□□ -1.74
PABPC1-220ENST00000522658 C9orf170A2RU37 121 aa4.18□□□□□ -1.74
PABPC1-220ENST00000522658 CCDC160A6NGH7 325 aa4.18□□□□□ -1.74
PABPC1-220ENST00000522658 H3BQ15 152 aa4.18□□□□□ -1.74
PABPC1-220ENST00000522658 IGHV3-30P01768 117 aa4.18□□□□□ -1.74
PABPC1-220ENST00000522658 IGHV3-33P01772 117 aa4.18□□□□□ -1.74
PABPC1-220ENST00000522658 C1QBP02746 253 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms