RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 DAZAP1Q96EP5 407 aaKnown RBP15.78■□□□□ 0.12
R3HCC1-208ENST00000522012 RBMY1BA6NDE4 496 aaKnown RBP15.77■□□□□ 0.11
R3HCC1-208ENST00000522012 RBMY1EA6NEQ0 496 aaKnown RBP15.77■□□□□ 0.11
R3HCC1-208ENST00000522012 A8MTW9 85 aa15.77■□□□□ 0.11
R3HCC1-208ENST00000522012 M0R2Z0 102 aa15.77■□□□□ 0.11
R3HCC1-208ENST00000522012 MT-ND4LP03901 98 aa15.77■□□□□ 0.11
R3HCC1-208ENST00000522012 RBMY1DP0C7P1 496 aaKnown RBP15.77■□□□□ 0.11
R3HCC1-208ENST00000522012 CRISP2P16562 243 aa15.77■□□□□ 0.11
R3HCC1-208ENST00000522012 TSPOP30536 169 aa15.77■□□□□ 0.11
R3HCC1-208ENST00000522012 RNASE4P34096 147 aaKnown RBP15.77■□□□□ 0.11
R3HCC1-208ENST00000522012 ZNF80P51504 273 aaPredicted RBP15.77■□□□□ 0.11
R3HCC1-208ENST00000522012 FXYD7P58549 80 aa15.77■□□□□ 0.11
R3HCC1-208ENST00000522012 SPINK13Q1W4C9 94 aa15.77■□□□□ 0.11
R3HCC1-208ENST00000522012 RNF212Q495C1 297 aa15.77■□□□□ 0.11
R3HCC1-208ENST00000522012 KRTAP10-11P60412 298 aa15.76■□□□□ 0.11
R3HCC1-208ENST00000522012 KIR3DS1Q14943 382 aa15.76■□□□□ 0.11
R3HCC1-208ENST00000522012 IBA57Q5T440 356 aaKnown RBP15.76■□□□□ 0.11
R3HCC1-208ENST00000522012 FAM162BQ5T6X4 162 aa15.76■□□□□ 0.11
R3HCC1-208ENST00000522012 PRR9Q5T870 116 aa15.76■□□□□ 0.11
R3HCC1-208ENST00000522012 TRPT1Q86TN4 253 aaKnown RBP15.76■□□□□ 0.11
R3HCC1-208ENST00000522012 C15orf54Q8N8G6 183 aa15.76■□□□□ 0.11
R3HCC1-208ENST00000522012 OR10G8Q8NGN5 311 aa15.76■□□□□ 0.11
R3HCC1-208ENST00000522012 ZMAT5Q9UDW3 170 aaKnown RBP15.76■□□□□ 0.11
R3HCC1-208ENST00000522012 SH2D1AO60880 128 aa15.75■□□□□ 0.11
R3HCC1-208ENST00000522012 EGFEM1PQ0D2K5 195 aa15.75■□□□□ 0.11
R3HCC1-208ENST00000522012 NUDT10Q8NFP7 164 aa15.75■□□□□ 0.11
R3HCC1-208ENST00000522012 NUDT11Q96G61 164 aa15.75■□□□□ 0.11
R3HCC1-208ENST00000522012 CLUHP3Q96NS8 147 aa15.75■□□□□ 0.11
R3HCC1-208ENST00000522012 OSTCQ9NRP0 149 aa15.75■□□□□ 0.11
R3HCC1-208ENST00000522012 CDKN1BP46527 198 aa15.74■□□□□ 0.11
R3HCC1-208ENST00000522012 BTN1A1Q13410 526 aa15.74■□□□□ 0.11
R3HCC1-208ENST00000522012 Q8N1Y9 231 aa15.74■□□□□ 0.11
R3HCC1-208ENST00000522012 TRRAPQ9Y4A5 3859 aa15.74■□□□□ 0.11
R3HCC1-208ENST00000522012 TRAV12-2A0A075B6T6 113 aa15.73■□□□□ 0.11
R3HCC1-208ENST00000522012 C19orf71A6NCJ1 209 aa15.73■□□□□ 0.11
R3HCC1-208ENST00000522012 FABP5P3A8MUU1 101 aa15.73■□□□□ 0.11
R3HCC1-208ENST00000522012 KLLNB2CW77 178 aa15.73■□□□□ 0.11
R3HCC1-208ENST00000522012 P01737 135 aa15.73■□□□□ 0.11
R3HCC1-208ENST00000522012 RPL35AP18077 110 aaKnown RBP15.73■□□□□ 0.11
R3HCC1-208ENST00000522012 SAMD5Q5TGI4 173 aa15.73■□□□□ 0.11
R3HCC1-208ENST00000522012 FAM231DQ6ZW35 169 aa15.73■□□□□ 0.11
R3HCC1-208ENST00000522012 PPP1R2P9O14990 202 aa15.73■□□□□ 0.11
R3HCC1-208ENST00000522012 GATCO43716 136 aaKnown RBP15.73■□□□□ 0.11
R3HCC1-208ENST00000522012 PFN1P07737 140 aaKnown RBP15.73■□□□□ 0.11
R3HCC1-208ENST00000522012 ANAPC16Q96DE5 110 aa15.73■□□□□ 0.11
R3HCC1-208ENST00000522012 SRD5A3Q9H8P0 318 aa15.73■□□□□ 0.11
R3HCC1-208ENST00000522012 ZNF705GA8MUZ8 300 aaPredicted RBP15.72■□□□□ 0.11
R3HCC1-208ENST00000522012 H7BYZ3 331 aa15.72■□□□□ 0.11
R3HCC1-208ENST00000522012 NUTF2P61970 127 aaKnown RBP15.72■□□□□ 0.11
R3HCC1-208ENST00000522012 Q6ZQT7 251 aa15.72■□□□□ 0.11
R3HCC1-208ENST00000522012 CTDSP1Q9GZU7 261 aa15.72■□□□□ 0.11
R3HCC1-208ENST00000522012 A0A087WWC5 75 aa15.71■□□□□ 0.11
R3HCC1-208ENST00000522012 TRAV12-3A0A0B4J271 114 aa15.71■□□□□ 0.11
R3HCC1-208ENST00000522012 C7orf71A4D174 169 aa15.71■□□□□ 0.11
R3HCC1-208ENST00000522012 SCO1O75880 301 aa15.71■□□□□ 0.11
R3HCC1-208ENST00000522012 GFI1BQ5VTD9 330 aa15.71■□□□□ 0.11
R3HCC1-208ENST00000522012 TRAV21A0A0B4J279 112 aa15.7■□□□□ 0.1
R3HCC1-208ENST00000522012 RPP21Q9H633 154 aaKnown RBP15.7■□□□□ 0.1
R3HCC1-208ENST00000522012 V9GYV3 84 aa15.7■□□□□ 0.1
R3HCC1-208ENST00000522012 SORL1Q92673 2214 aa15.7■□□□□ 0.1
R3HCC1-208ENST00000522012 ORM1P02763 201 aa15.69■□□□□ 0.1
R3HCC1-208ENST00000522012 Q6AWC8 147 aa15.69■□□□□ 0.1
R3HCC1-208ENST00000522012 OR2D3Q8NGH3 330 aa15.69■□□□□ 0.1
R3HCC1-208ENST00000522012 TUBA4BQ9H853 241 aa15.69■□□□□ 0.1
R3HCC1-208ENST00000522012 NOTCH3Q9UM47 2321 aa15.68■□□□□ 0.1
R3HCC1-208ENST00000522012 XCL2Q9UBD3 114 aa15.68■□□□□ 0.1
R3HCC1-208ENST00000522012 NAGKQ9UJ70 344 aa15.68■□□□□ 0.1
R3HCC1-208ENST00000522012 TMEM189A5PLL7 270 aa15.68■□□□□ 0.1
R3HCC1-208ENST00000522012 CRXO43186 299 aaPredicted RBP15.68■□□□□ 0.1
R3HCC1-208ENST00000522012 CA1P00915 261 aaPredicted RBP15.68■□□□□ 0.1
R3HCC1-208ENST00000522012 AMBPP02760 352 aa15.68■□□□□ 0.1
R3HCC1-208ENST00000522012 RPL19P84098 196 aaKnown RBP15.68■□□□□ 0.1
R3HCC1-208ENST00000522012 C11orf21Q9P2W6 132 aa15.68■□□□□ 0.1
R3HCC1-208ENST00000522012 TMSB15BA0A087X1C1 80 aa15.67■□□□□ 0.1
R3HCC1-208ENST00000522012 TMEM88Q6PEY1 159 aa15.67■□□□□ 0.1
R3HCC1-208ENST00000522012 MORN3Q6PF18 240 aaPredicted RBP15.67■□□□□ 0.1
R3HCC1-208ENST00000522012 TMEM242Q9NWH2 141 aa15.67■□□□□ 0.1
R3HCC1-208ENST00000522012 ZNF324O75467 553 aaPredicted RBP15.66■□□□□ 0.1
R3HCC1-208ENST00000522012 MUC21Q5SSG8 566 aa15.66■□□□□ 0.1
R3HCC1-208ENST00000522012 INSP01308 110 aa15.65■□□□□ 0.1
R3HCC1-208ENST00000522012 CBLN2Q8IUK8 224 aa15.65■□□□□ 0.1
R3HCC1-208ENST00000522012 LOC102724200A0A096LPH7 203 aaPredicted RBP15.64■□□□□ 0.09
R3HCC1-208ENST00000522012 IGHV4-30-4P0DP06 118 aa15.64■□□□□ 0.09
R3HCC1-208ENST00000522012 LINC01559Q495D7 138 aa15.64■□□□□ 0.09
R3HCC1-208ENST00000522012 CSTL1Q9H114 145 aa15.64■□□□□ 0.09
R3HCC1-208ENST00000522012 SMCO4Q9NRQ5 59 aa15.64■□□□□ 0.09
R3HCC1-208ENST00000522012 IL36BQ9NZH7 164 aa15.64■□□□□ 0.09
R3HCC1-208ENST00000522012 IGKV3D-20A0A0C4DH25 116 aa15.63■□□□□ 0.09
R3HCC1-208ENST00000522012 A8MWL6 223 aa15.63■□□□□ 0.09
R3HCC1-208ENST00000522012 RBMY1A1P0DJD3 496 aaKnown RBP15.63■□□□□ 0.09
R3HCC1-208ENST00000522012 RBMY1CP0DJD4 496 aa15.63■□□□□ 0.09
R3HCC1-208ENST00000522012 GZMBP10144 247 aa15.63■□□□□ 0.09
R3HCC1-208ENST00000522012 RBMY1FQ15415 496 aaKnown RBP15.63■□□□□ 0.09
R3HCC1-208ENST00000522012 ANXA2RQ3ZCQ2 193 aa15.63■□□□□ 0.09
R3HCC1-208ENST00000522012 CT83Q5H943 113 aa15.63■□□□□ 0.09
R3HCC1-208ENST00000522012 URGCP-MRPS24S4R325 110 aa15.63■□□□□ 0.09
R3HCC1-208ENST00000522012 AGRNO00468 2067 aa15.63■□□□□ 0.09
R3HCC1-208ENST00000522012 XKRY2A2RUG3 117 aa15.63■□□□□ 0.09
R3HCC1-208ENST00000522012 GIG44P09565 113 aaPredicted RBP15.63■□□□□ 0.09
R3HCC1-208ENST00000522012 TCL1AP56279 114 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms