RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 BTN1A1Q13410 526 aa17.59■□□□□ 0.41
PVT1-212ENST00000521951 BAGE2Q86Y30 109 aa17.59■□□□□ 0.41
PVT1-212ENST00000521951 C7orf71A4D174 169 aa17.58■□□□□ 0.41
PVT1-212ENST00000521951 ZNF674Q2M3X9 581 aa17.58■□□□□ 0.41
PVT1-212ENST00000521951 CENPWQ5EE01 88 aa17.58■□□□□ 0.41
PVT1-212ENST00000521951 COMMD7Q86VX2 200 aa17.58■□□□□ 0.41
PVT1-212ENST00000521951 NBEAL2Q6ZNJ1 2754 aa17.58■□□□□ 0.4
PVT1-212ENST00000521951 TRBV20OR9-2A0A075B6H5 130 aa17.57■□□□□ 0.4
PVT1-212ENST00000521951 TRAV12-3A0A0B4J271 114 aa17.57■□□□□ 0.4
PVT1-212ENST00000521951 RBMY1A1P0DJD3 496 aaKnown RBP17.57■□□□□ 0.4
PVT1-212ENST00000521951 RBMY1CP0DJD4 496 aa17.57■□□□□ 0.4
PVT1-212ENST00000521951 RBMY1FQ15415 496 aaKnown RBP17.57■□□□□ 0.4
PVT1-212ENST00000521951 SMUG1Q53HV7 270 aa17.57■□□□□ 0.4
PVT1-212ENST00000521951 C1orf158Q8N1D5 194 aa17.57■□□□□ 0.4
PVT1-212ENST00000521951 NHLRC2Q8NBF2 726 aa17.57■□□□□ 0.4
PVT1-212ENST00000521951 TMEM183AQ8IXX5 376 aa17.57■□□□□ 0.4
PVT1-212ENST00000521951 RNF183Q96D59 192 aa17.57■□□□□ 0.4
PVT1-212ENST00000521951 RCHY1Q96PM5 261 aa17.57■□□□□ 0.4
PVT1-212ENST00000521951 MLST8Q9BVC4 326 aa17.57■□□□□ 0.4
PVT1-212ENST00000521951 FBN3Q75N90 2809 aa17.57■□□□□ 0.4
PVT1-212ENST00000521951 ZNF324O75467 553 aaPredicted RBP17.56■□□□□ 0.4
PVT1-212ENST00000521951 GNG4P50150 75 aa17.56■□□□□ 0.4
PVT1-212ENST00000521951 ZNF80P51504 273 aaPredicted RBP17.56■□□□□ 0.4
PVT1-212ENST00000521951 Q6ZQT7 251 aa17.56■□□□□ 0.4
PVT1-212ENST00000521951 COX8CQ7Z4L0 72 aa17.56■□□□□ 0.4
PVT1-212ENST00000521951 C20orf144Q9BQM9 153 aa17.56■□□□□ 0.4
PVT1-212ENST00000521951 TM2D3Q9BRN9 247 aa17.56■□□□□ 0.4
PVT1-212ENST00000521951 PRKDCP78527 4128 aaKnown RBP17.55■□□□□ 0.4
PVT1-212ENST00000521951 SPRY2O43597 315 aa17.55■□□□□ 0.4
PVT1-212ENST00000521951 GCGP01275 180 aa17.55■□□□□ 0.4
PVT1-212ENST00000521951 IGLV2-8P01709 118 aa17.55■□□□□ 0.4
PVT1-212ENST00000521951 Q6AWC8 147 aa17.55■□□□□ 0.4
PVT1-212ENST00000521951 ZC2HC1AQ96GY0 325 aa17.55■□□□□ 0.4
PVT1-212ENST00000521951 RETNQ9HD89 108 aa17.55■□□□□ 0.4
PVT1-212ENST00000521951 GOLT1BQ9Y3E0 138 aa17.55■□□□□ 0.4
PVT1-212ENST00000521951 UQCC3Q6UW78 93 aa17.54■□□□□ 0.4
PVT1-212ENST00000521951 SMIM7Q9BQ49 75 aa17.54■□□□□ 0.4
PVT1-212ENST00000521951 OVOL2Q9BRP0 275 aa17.54■□□□□ 0.4
PVT1-212ENST00000521951 TP53TG1Q9Y2A0 90 aa17.54■□□□□ 0.4
PVT1-212ENST00000521951 IGHV3OR16-12A0A075B7B8 117 aa17.53■□□□□ 0.4
PVT1-212ENST00000521951 PGPEP1LA6NFU8 196 aa17.53■□□□□ 0.4
PVT1-212ENST00000521951 ZNF727A8MUV8 499 aa17.53■□□□□ 0.4
PVT1-212ENST00000521951 C9JCJ5 164 aa17.53■□□□□ 0.4
PVT1-212ENST00000521951 ZNF705AQ6ZN79 300 aaPredicted RBP17.53■□□□□ 0.4
PVT1-212ENST00000521951 EIF4E3Q8N5X7 224 aaKnown RBP17.53■□□□□ 0.4
PVT1-212ENST00000521951 NIPSNAP3BQ9BS92 247 aa17.53■□□□□ 0.4
PVT1-212ENST00000521951 TMEM208Q9BTX3 173 aa17.53■□□□□ 0.4
PVT1-212ENST00000521951 LINC01587Q99440 93 aa17.52■□□□□ 0.4
PVT1-212ENST00000521951 SPATA25Q9BR10 227 aa17.52■□□□□ 0.4
PVT1-212ENST00000521951 CRIP1P50238 77 aa17.52■□□□□ 0.39
PVT1-212ENST00000521951 TMEM256Q8N2U0 113 aa17.52■□□□□ 0.39
PVT1-212ENST00000521951 SMIM12Q96EX1 92 aa17.52■□□□□ 0.39
PVT1-212ENST00000521951 DNAH9Q9NYC9 4486 aa17.51■□□□□ 0.39
PVT1-212ENST00000521951 TRAV21A0A0B4J279 112 aa17.51■□□□□ 0.39
PVT1-212ENST00000521951 SFTA3P0C7M3 94 aa17.51■□□□□ 0.39
PVT1-212ENST00000521951 FAM74A3Q4VXF1 159 aa17.51■□□□□ 0.39
PVT1-212ENST00000521951 SOHLH1Q5JUK2 328 aa17.51■□□□□ 0.39
PVT1-212ENST00000521951 OR11H2Q8NH07 326 aa17.51■□□□□ 0.39
PVT1-212ENST00000521951 OCC1Q8TAD7 63 aa17.51■□□□□ 0.39
PVT1-212ENST00000521951 H7BYZ3 331 aa17.5■□□□□ 0.39
PVT1-212ENST00000521951 PFN1P07737 140 aaKnown RBP17.5■□□□□ 0.39
PVT1-212ENST00000521951 FABP5P3A8MUU1 101 aa17.49■□□□□ 0.39
PVT1-212ENST00000521951 MGST1P10620 155 aaKnown RBP17.49■□□□□ 0.39
PVT1-212ENST00000521951 ZMAT4Q9H898 229 aa17.49■□□□□ 0.39
PVT1-212ENST00000521951 X6R8D5 127 aa17.49■□□□□ 0.39
PVT1-212ENST00000521951 PRM2P04554 102 aa17.48■□□□□ 0.39
PVT1-212ENST00000521951 FAM162BQ5T6X4 162 aa17.48■□□□□ 0.39
PVT1-212ENST00000521951 SH2D1AO60880 128 aa17.47■□□□□ 0.39
PVT1-212ENST00000521951 PYGO2Q9BRQ0 406 aa17.47■□□□□ 0.39
PVT1-212ENST00000521951 C11orf21Q9P2W6 132 aa17.47■□□□□ 0.39
PVT1-212ENST00000521951 LY96Q9Y6Y9 160 aa17.47■□□□□ 0.39
PVT1-212ENST00000521951 ZNF705GA8MUZ8 300 aaPredicted RBP17.47■□□□□ 0.39
PVT1-212ENST00000521951 K7EN84 100 aa17.47■□□□□ 0.39
PVT1-212ENST00000521951 NHLRC4P0CG21 123 aaPredicted RBP17.47■□□□□ 0.39
PVT1-212ENST00000521951 HTN1P15515 57 aa17.47■□□□□ 0.39
PVT1-212ENST00000521951 TMEM241Q24JQ0 296 aa17.47■□□□□ 0.39
PVT1-212ENST00000521951 MUC21Q5SSG8 566 aa17.47■□□□□ 0.39
PVT1-212ENST00000521951 PRR27Q6MZM9 219 aa17.47■□□□□ 0.39
PVT1-212ENST00000521951 NEU1Q99519 415 aa17.47■□□□□ 0.39
PVT1-212ENST00000521951 IGHV1OR15-1A0A075B7D0 117 aa17.46■□□□□ 0.39
PVT1-212ENST00000521951 OR5I1Q13606 314 aa17.46■□□□□ 0.39
PVT1-212ENST00000521951 LINC00467Q9BRT7 94 aa17.46■□□□□ 0.39
PVT1-212ENST00000521951 TENM3Q9P273 2699 aa17.45■□□□□ 0.38
PVT1-212ENST00000521951 TMEM218A2RU14 115 aa17.45■□□□□ 0.38
PVT1-212ENST00000521951 NAT8Q9UHE5 227 aa17.45■□□□□ 0.38
PVT1-212ENST00000521951 NAGKQ9UJ70 344 aa17.45■□□□□ 0.38
PVT1-212ENST00000521951 HUWE1Q7Z6Z7 4374 aaKnown RBP17.45■□□□□ 0.38
PVT1-212ENST00000521951 SMIM9A6NGZ8 99 aa17.44■□□□□ 0.38
PVT1-212ENST00000521951 AZU1P20160 251 aa17.44■□□□□ 0.38
PVT1-212ENST00000521951 ANXA2RQ3ZCQ2 193 aa17.44■□□□□ 0.38
PVT1-212ENST00000521951 FAM159AQ6UWV7 190 aa17.44■□□□□ 0.38
PVT1-212ENST00000521951 LINC01551Q86U37 167 aa17.44■□□□□ 0.38
PVT1-212ENST00000521951 BIN3Q9NQY0 253 aa17.44■□□□□ 0.38
PVT1-212ENST00000521951 RRN3P1Q2M238 152 aa17.43■□□□□ 0.38
PVT1-212ENST00000521951 TDRG1Q3Y452 100 aa17.42■□□□□ 0.38
PVT1-212ENST00000521951 SDF2L1Q9HCN8 221 aa17.42■□□□□ 0.38
PVT1-212ENST00000521951 TP53TG3Q9ULZ0 132 aa17.42■□□□□ 0.38
PVT1-212ENST00000521951 CBY3A6NI87 242 aa17.42■□□□□ 0.38
PVT1-212ENST00000521951 ORM1P02763 201 aa17.42■□□□□ 0.38
PVT1-212ENST00000521951 MIFP14174 115 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms