RNA–Protein interactions for RNA: ENST00000521425.5

TRAM1-205, Transcript of translocation associated membrane protein 1, humanhuman

TSL 2 BASIC

Gene TRAM1, Length 3,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-205ENST00000521425 NIPBLQ6KC79 2804 aaeCLIP13.64□□□□□ -0.23
TRAM1-205ENST00000521425 TWIST1Q15672 202 aa13.64□□□□□ -0.23
TRAM1-205ENST00000521425 SHISA2Q6UWI4 295 aa13.64□□□□□ -0.23
TRAM1-205ENST00000521425 Q86TA4 180 aa13.64□□□□□ -0.23
TRAM1-205ENST00000521425 MSRB1Q9NZV6 116 aa13.64□□□□□ -0.23
TRAM1-205ENST00000521425 A0A1W2PPM0 123 aa13.63□□□□□ -0.23
TRAM1-205ENST00000521425 FAM106CPP0CH98 169 aa13.63□□□□□ -0.23
TRAM1-205ENST00000521425 EVI2AP22794 236 aa13.63□□□□□ -0.23
TRAM1-205ENST00000521425 C2orf91Q6ZV80 131 aa13.63□□□□□ -0.23
TRAM1-205ENST00000521425 J3QR89 54 aa13.63□□□□□ -0.23
TRAM1-205ENST00000521425 UCNP55089 124 aa13.63□□□□□ -0.23
TRAM1-205ENST00000521425 COX19Q49B96 90 aa13.63□□□□□ -0.23
TRAM1-205ENST00000521425 AMTNQ6UX39 209 aa13.63□□□□□ -0.23
TRAM1-205ENST00000521425 FA2HQ7L5A8 372 aa13.63□□□□□ -0.23
TRAM1-205ENST00000521425 PRAC2D3DTV9 90 aa13.63□□□□□ -0.23
TRAM1-205ENST00000521425 HOXB4P17483 251 aaPredicted RBP13.63□□□□□ -0.23
TRAM1-205ENST00000521425 AMN1Q8IY45 258 aa13.63□□□□□ -0.23
TRAM1-205ENST00000521425 HIF1ANQ9NWT6 349 aa13.63□□□□□ -0.23
TRAM1-205ENST00000521425 CHD6Q8TD26 2715 aa13.62□□□□□ -0.23
TRAM1-205ENST00000521425 H3BRM9 83 aa13.62□□□□□ -0.23
TRAM1-205ENST00000521425 PF4V1P10720 104 aa13.62□□□□□ -0.23
TRAM1-205ENST00000521425 FAM106AQ4KMX7 169 aa13.62□□□□□ -0.23
TRAM1-205ENST00000521425 UFC1Q9Y3C8 167 aa13.62□□□□□ -0.23
TRAM1-205ENST00000521425 TRBV19A0A075B6N1 114 aa13.62□□□□□ -0.23
TRAM1-205ENST00000521425 FNDC10F2Z333 226 aa13.62□□□□□ -0.23
TRAM1-205ENST00000521425 FSTL3O95633 263 aa13.62□□□□□ -0.23
TRAM1-205ENST00000521425 URB1-AS1Q96HZ7 61 aa13.62□□□□□ -0.23
TRAM1-205ENST00000521425 CRYGBP07316 175 aa13.62□□□□□ -0.23
TRAM1-205ENST00000521425 CFHR4Q92496 578 aa13.62□□□□□ -0.23
TRAM1-205ENST00000521425 IGHV7-81A0A0B4J1V7 117 aa13.61□□□□□ -0.23
TRAM1-205ENST00000521425 INSL3P51460 131 aa13.61□□□□□ -0.23
TRAM1-205ENST00000521425 ATP5IP56385 69 aaPredicted RBP13.61□□□□□ -0.23
TRAM1-205ENST00000521425 LYZL1Q6UWQ5 148 aa13.61□□□□□ -0.23
TRAM1-205ENST00000521425 CRYGCP07315 174 aa13.6□□□□□ -0.23
TRAM1-205ENST00000521425 SHANK2-AS3Q9BTD1 123 aa13.6□□□□□ -0.23
TRAM1-205ENST00000521425 COX8AP10176 69 aa13.6□□□□□ -0.23
TRAM1-205ENST00000521425 HTN1P15515 57 aa13.6□□□□□ -0.23
TRAM1-205ENST00000521425 FCER1GP30273 86 aa13.6□□□□□ -0.23
TRAM1-205ENST00000521425 ZNF562Q6V9R5 426 aa13.6□□□□□ -0.23
TRAM1-205ENST00000521425 C1RLQ9NZP8 487 aa13.6□□□□□ -0.23
TRAM1-205ENST00000521425 IGHV4-61A0A0C4DH41 118 aa13.6□□□□□ -0.23
TRAM1-205ENST00000521425 TMEM189A5PLL7 270 aa13.6□□□□□ -0.23
TRAM1-205ENST00000521425 IGHV4-38-2P0DP08 117 aa13.6□□□□□ -0.23
TRAM1-205ENST00000521425 OR5A1Q8NGJ0 315 aa13.6□□□□□ -0.23
TRAM1-205ENST00000521425 MBD6Q96DN6 1003 aa13.6□□□□□ -0.23
TRAM1-205ENST00000521425 C7orf69Q9H7B7 122 aa13.6□□□□□ -0.23
TRAM1-205ENST00000521425 SMPXQ9UHP9 88 aa13.6□□□□□ -0.23
TRAM1-205ENST00000521425 AGRNO00468 2067 aa13.59□□□□□ -0.23
TRAM1-205ENST00000521425 TRBV12-3P01733 135 aa13.59□□□□□ -0.23
TRAM1-205ENST00000521425 BLCAPP62952 87 aa13.59□□□□□ -0.23
TRAM1-205ENST00000521425 RBPMS2Q6ZRY4 209 aaKnown RBP13.59□□□□□ -0.23
TRAM1-205ENST00000521425 FMC1Q96HJ9 113 aa13.59□□□□□ -0.23
TRAM1-205ENST00000521425 TTTY13Q9BZ97 58 aa13.59□□□□□ -0.23
TRAM1-205ENST00000521425 OTORQ9NRC9 128 aa13.59□□□□□ -0.23
TRAM1-205ENST00000521425 FLNAP21333 2647 aaKnown RBP13.59□□□□□ -0.23
TRAM1-205ENST00000521425 Q6ZS46 218 aa13.59□□□□□ -0.23
TRAM1-205ENST00000521425 SFTA2Q6UW10 78 aa13.58□□□□□ -0.23
TRAM1-205ENST00000521425 LY6LH3BQJ8 138 aa13.58□□□□□ -0.24
TRAM1-205ENST00000521425 TRGV3P03979 118 aa13.58□□□□□ -0.24
TRAM1-205ENST00000521425 CTSGP08311 255 aa13.58□□□□□ -0.24
TRAM1-205ENST00000521425 ZNF414Q96IQ9 312 aa13.58□□□□□ -0.24
TRAM1-205ENST00000521425 KLK15Q9H2R5 256 aa13.58□□□□□ -0.24
TRAM1-205ENST00000521425 A0A1B0GUT8 65 aa13.58□□□□□ -0.24
TRAM1-205ENST00000521425 H3BMG7 143 aa13.58□□□□□ -0.24
TRAM1-205ENST00000521425 CRIP1P50238 77 aa13.58□□□□□ -0.24
TRAM1-205ENST00000521425 SIGLEC15Q6ZMC9 328 aa13.58□□□□□ -0.24
TRAM1-205ENST00000521425 PCP2Q8IVA1 136 aa13.58□□□□□ -0.24
TRAM1-205ENST00000521425 NHP2Q9NX24 153 aaKnown RBP13.58□□□□□ -0.24
TRAM1-205ENST00000521425 IGHV4-39P01824 125 aa13.57□□□□□ -0.24
TRAM1-205ENST00000521425 GATA1P15976 413 aaPredicted RBP13.57□□□□□ -0.24
TRAM1-205ENST00000521425 LOXL1Q08397 574 aaPredicted RBP13.57□□□□□ -0.24
TRAM1-205ENST00000521425 D6R8Y8 96 aa13.57□□□□□ -0.24
TRAM1-205ENST00000521425 F6UB75 175 aa13.57□□□□□ -0.24
TRAM1-205ENST00000521425 H3BUX3 64 aa13.57□□□□□ -0.24
TRAM1-205ENST00000521425 SPAG8Q99932 426 aaPredicted RBP13.57□□□□□ -0.24
TRAM1-205ENST00000521425 IFI27P40305 119 aaPredicted RBP13.57□□□□□ -0.24
TRAM1-205ENST00000521425 EFNA4P52798 201 aa13.57□□□□□ -0.24
TRAM1-205ENST00000521425 PET117Q6UWS5 81 aa13.57□□□□□ -0.24
TRAM1-205ENST00000521425 Q8N9W7 124 aa13.57□□□□□ -0.24
TRAM1-205ENST00000521425 ITLN2Q8WWU7 325 aaPredicted RBP13.57□□□□□ -0.24
TRAM1-205ENST00000521425 RNF183Q96D59 192 aa13.57□□□□□ -0.24
TRAM1-205ENST00000521425 MRAP2Q96G30 205 aa13.57□□□□□ -0.24
TRAM1-205ENST00000521425 CCL19Q99731 98 aa13.57□□□□□ -0.24
TRAM1-205ENST00000521425 AP5S1Q9NUS5 200 aa13.57□□□□□ -0.24
TRAM1-205ENST00000521425 B5MCH6 92 aa13.56□□□□□ -0.24
TRAM1-205ENST00000521425 SMIM13P0DJ93 91 aa13.56□□□□□ -0.24
TRAM1-205ENST00000521425 ZNF80P51504 273 aaPredicted RBP13.56□□□□□ -0.24
TRAM1-205ENST00000521425 HERV-K104P63124 156 aa13.56□□□□□ -0.24
TRAM1-205ENST00000521425 WIPF2Q8TF74 440 aaPredicted RBP13.56□□□□□ -0.24
TRAM1-205ENST00000521425 LY96Q9Y6Y9 160 aa13.56□□□□□ -0.24
TRAM1-205ENST00000521425 GAS8-AS1O95177 125 aa13.56□□□□□ -0.24
TRAM1-205ENST00000521425 SH2D1AO60880 128 aa13.55□□□□□ -0.24
TRAM1-205ENST00000521425 LTAP01374 205 aa13.55□□□□□ -0.24
TRAM1-205ENST00000521425 OR11H6Q8NGC7 330 aa13.55□□□□□ -0.24
TRAM1-205ENST00000521425 C20orf78Q9BR46 151 aa13.55□□□□□ -0.24
TRAM1-205ENST00000521425 HELZ2Q9BYK8 2649 aaKnown RBP13.55□□□□□ -0.24
TRAM1-205ENST00000521425 SPINK8P0C7L1 97 aa13.55□□□□□ -0.24
TRAM1-205ENST00000521425 KHDC1LQ5JSQ8 128 aa13.55□□□□□ -0.24
TRAM1-205ENST00000521425 IL17RELQ6ZVW7 336 aa13.55□□□□□ -0.24
TRAM1-205ENST00000521425 IGF1P05019 195 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms