RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 MIFP14174 115 aa2.54□□□□□ -2
VPS13B-208ENST00000521037 LPAR6P43657 344 aa2.54□□□□□ -2
VPS13B-208ENST00000521037 SULT1A1P50225 295 aa2.54□□□□□ -2
VPS13B-208ENST00000521037 AKR1C2P52895 323 aa2.54□□□□□ -2
VPS13B-208ENST00000521037 SUPT4H1P63272 117 aaKnown RBP2.54□□□□□ -2
VPS13B-208ENST00000521037 AKR1C1Q04828 323 aa2.54□□□□□ -2
VPS13B-208ENST00000521037 BAXQ07812 192 aa2.54□□□□□ -2
VPS13B-208ENST00000521037 FABP9Q0Z7S8 132 aa2.54□□□□□ -2
VPS13B-208ENST00000521037 ARFRP1Q13795 201 aa2.54□□□□□ -2
VPS13B-208ENST00000521037 AADACL3Q5VUY0 350 aa2.54□□□□□ -2
VPS13B-208ENST00000521037 RPL7L1Q6DKI1 246 aaKnown RBP2.54□□□□□ -2
VPS13B-208ENST00000521037 REG3GQ6UW15 175 aa2.54□□□□□ -2
VPS13B-208ENST00000521037 GLIPR1L1Q6UWM5 242 aa2.54□□□□□ -2
VPS13B-208ENST00000521037 ZNF600Q6ZNG1 722 aa2.54□□□□□ -2
VPS13B-208ENST00000521037 STX12Q86Y82 276 aa2.54□□□□□ -2
VPS13B-208ENST00000521037 LGI3Q8N145 548 aa2.54□□□□□ -2
VPS13B-208ENST00000521037 FAM24BQ8N5W8 94 aa2.54□□□□□ -2
VPS13B-208ENST00000521037 ZNF565Q8N9K5 539 aa2.54□□□□□ -2
VPS13B-208ENST00000521037 OR51A2Q8NGJ7 313 aa2.54□□□□□ -2
VPS13B-208ENST00000521037 RNASE11Q8TAA1 199 aaKnown RBP2.54□□□□□ -2
VPS13B-208ENST00000521037 CHCHD10Q8WYQ3 142 aaPredicted RBP2.54□□□□□ -2
VPS13B-208ENST00000521037 TMEM230Q96A57 120 aa2.54□□□□□ -2
VPS13B-208ENST00000521037 USMG5Q96IX5 58 aa2.54□□□□□ -2
VPS13B-208ENST00000521037 BTF3L4Q96K17 158 aa2.54□□□□□ -2
VPS13B-208ENST00000521037 FAM210BQ96KR6 192 aa2.54□□□□□ -2
VPS13B-208ENST00000521037 PGLYRP4Q96LB8 373 aa2.54□□□□□ -2
VPS13B-208ENST00000521037 PFDN5Q99471 154 aa2.54□□□□□ -2
VPS13B-208ENST00000521037 RTBDNQ9BSG5 229 aaPredicted RBP2.54□□□□□ -2
VPS13B-208ENST00000521037 HINT2Q9BX68 163 aa2.54□□□□□ -2
VPS13B-208ENST00000521037 MAP1LC3CQ9BXW4 147 aa2.54□□□□□ -2
VPS13B-208ENST00000521037 EIF5A2Q9GZV4 153 aaKnown RBP2.54□□□□□ -2
VPS13B-208ENST00000521037 SLC25A31Q9H0C2 315 aa2.54□□□□□ -2
VPS13B-208ENST00000521037 NAA60Q9H7X0 242 aa2.54□□□□□ -2
VPS13B-208ENST00000521037 OR2S2Q9NQN1 319 aa2.54□□□□□ -2
VPS13B-208ENST00000521037 KCNIP1Q9NZI2 227 aa2.54□□□□□ -2
VPS13B-208ENST00000521037 OR5AC2Q9NZP5 309 aa2.54□□□□□ -2
VPS13B-208ENST00000521037 GOLT1BQ9Y3E0 138 aa2.54□□□□□ -2
VPS13B-208ENST00000521037 A0A087WTM6 91 aa2.53□□□□□ -2
VPS13B-208ENST00000521037 TSTD3H0UI37 97 aa2.53□□□□□ -2
VPS13B-208ENST00000521037 PITX3O75364 302 aa2.53□□□□□ -2
VPS13B-208ENST00000521037 ADAP1O75689 374 aa2.53□□□□□ -2
VPS13B-208ENST00000521037 CRTAPO75718 401 aaPredicted RBP2.53□□□□□ -2
VPS13B-208ENST00000521037 IGKV1-16P04430 117 aa2.53□□□□□ -2
VPS13B-208ENST00000521037 CTXN2P0C2S0 81 aa2.53□□□□□ -2
VPS13B-208ENST00000521037 SLC25A6P12236 298 aa2.53□□□□□ -2
VPS13B-208ENST00000521037 HIST1H1BP16401 226 aaKnown RBP2.53□□□□□ -2
VPS13B-208ENST00000521037 FUT3P21217 361 aa2.53□□□□□ -2
VPS13B-208ENST00000521037 S100GP29377 79 aa2.53□□□□□ -2
VPS13B-208ENST00000521037 LINC00315P59091 139 aa2.53□□□□□ -2
VPS13B-208ENST00000521037 S100A10P60903 97 aa2.53□□□□□ -2
VPS13B-208ENST00000521037 PKIAP61925 76 aa2.53□□□□□ -2
VPS13B-208ENST00000521037 TMEM267Q0VDI3 215 aaPredicted RBP2.53□□□□□ -2
VPS13B-208ENST00000521037 KISS1Q15726 138 aa2.53□□□□□ -2
VPS13B-208ENST00000521037 KHDC3LQ587J8 217 aa2.53□□□□□ -2
VPS13B-208ENST00000521037 Q6ZN92 141 aa2.53□□□□□ -2
VPS13B-208ENST00000521037 Q6ZS49 121 aa2.53□□□□□ -2
VPS13B-208ENST00000521037 MRPL52Q86TS9 123 aaKnown RBP2.53□□□□□ -2
VPS13B-208ENST00000521037 UBE2DNLQ8IWF7 75 aa2.53□□□□□ -2
VPS13B-208ENST00000521037 GAPTQ8N292 157 aa2.53□□□□□ -2
VPS13B-208ENST00000521037 SUMF2Q8NBJ7 301 aa2.53□□□□□ -2
VPS13B-208ENST00000521037 ZNF502Q8TBZ5 544 aa2.53□□□□□ -2
VPS13B-208ENST00000521037 MAFIPQ8WZ33 124 aa2.53□□□□□ -2
VPS13B-208ENST00000521037 IL22RA2Q969J5 263 aa2.53□□□□□ -2
VPS13B-208ENST00000521037 TVP23CQ96ET8 276 aa2.53□□□□□ -2
VPS13B-208ENST00000521037 ADAT3Q96EY9 351 aaPredicted RBP2.53□□□□□ -2
VPS13B-208ENST00000521037 ARHGAP5-AS1Q96IT6 56 aa2.53□□□□□ -2
VPS13B-208ENST00000521037 OR10C1Q96KK4 312 aa2.53□□□□□ -2
VPS13B-208ENST00000521037 YPEL4Q96NS1 127 aa2.53□□□□□ -2
VPS13B-208ENST00000521037 GPER1Q99527 375 aa2.53□□□□□ -2
VPS13B-208ENST00000521037 OPRPNQ99935 248 aaPredicted RBP2.53□□□□□ -2
VPS13B-208ENST00000521037 GGACTQ9BVM4 153 aa2.53□□□□□ -2
VPS13B-208ENST00000521037 CHST5Q9GZS9 411 aa2.53□□□□□ -2
VPS13B-208ENST00000521037 IFI27L2Q9H2X8 130 aa2.53□□□□□ -2
VPS13B-208ENST00000521037 PLEKHJ1Q9NW61 149 aa2.53□□□□□ -2
VPS13B-208ENST00000521037 GSKIPQ9P0R6 139 aa2.53□□□□□ -2
VPS13B-208ENST00000521037 USH2AO75445 5202 aa2.52□□□□□ -2.01
VPS13B-208ENST00000521037 TRBV24-1A0A075B6N3 115 aa2.52□□□□□ -2.01
VPS13B-208ENST00000521037 TRAV9-2A0A087WT02 112 aa2.52□□□□□ -2.01
VPS13B-208ENST00000521037 A0A0G2JRQ6 117 aa2.52□□□□□ -2.01
VPS13B-208ENST00000521037 RBFOX3A6NFN3 312 aa2.52□□□□□ -2.01
VPS13B-208ENST00000521037 H0YJW9 148 aa2.52□□□□□ -2.01
VPS13B-208ENST00000521037 SOCS1O15524 211 aa2.52□□□□□ -2.01
VPS13B-208ENST00000521037 IFNA1P01562 189 aa2.52□□□□□ -2.01
VPS13B-208ENST00000521037 OR5AC1P0C628 307 aa2.52□□□□□ -2.01
VPS13B-208ENST00000521037 NQO2P16083 231 aa2.52□□□□□ -2.01
VPS13B-208ENST00000521037 CEACAM6P40199 344 aa2.52□□□□□ -2.01
VPS13B-208ENST00000521037 RBP2P50120 134 aa2.52□□□□□ -2.01
VPS13B-208ENST00000521037 RND2P52198 227 aa2.52□□□□□ -2.01
VPS13B-208ENST00000521037 PIGPP57054 158 aa2.52□□□□□ -2.01
VPS13B-208ENST00000521037 UBE2KP61086 200 aa2.52□□□□□ -2.01
VPS13B-208ENST00000521037 RHOGP84095 191 aa2.52□□□□□ -2.01
VPS13B-208ENST00000521037 COTL1Q14019 142 aa2.52□□□□□ -2.01
VPS13B-208ENST00000521037 FXYD3Q14802 87 aa2.52□□□□□ -2.01
VPS13B-208ENST00000521037 PRR4Q16378 134 aa2.52□□□□□ -2.01
VPS13B-208ENST00000521037 OR2B11Q5JQS5 317 aa2.52□□□□□ -2.01
VPS13B-208ENST00000521037 LEMD1Q68G75 181 aa2.52□□□□□ -2.01
VPS13B-208ENST00000521037 C2orf66Q6UXQ4 117 aa2.52□□□□□ -2.01
VPS13B-208ENST00000521037 Q8IYB0 196 aa2.52□□□□□ -2.01
VPS13B-208ENST00000521037 H1FOOQ8IZA3 346 aaPredicted RBP2.52□□□□□ -2.01
VPS13B-208ENST00000521037 ZFP82Q8N141 532 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms