RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 RBMY1A1P0DJD3 496 aaKnown RBP11.16□□□□□ -0.62
LSM1-203ENST00000520755 RBMY1CP0DJD4 496 aa11.16□□□□□ -0.62
LSM1-203ENST00000520755 TAS2R60P59551 318 aa11.16□□□□□ -0.62
LSM1-203ENST00000520755 RBMY1FQ15415 496 aaKnown RBP11.16□□□□□ -0.62
LSM1-203ENST00000520755 ZNF674Q2M3X9 581 aa11.16□□□□□ -0.62
LSM1-203ENST00000520755 UQCC3Q6UW78 93 aa11.16□□□□□ -0.62
LSM1-203ENST00000520755 NHLRC2Q8NBF2 726 aa11.16□□□□□ -0.62
LSM1-203ENST00000520755 XCL2Q9UBD3 114 aa11.16□□□□□ -0.62
LSM1-203ENST00000520755 U3KQK5 164 aa11.16□□□□□ -0.62
LSM1-203ENST00000520755 J3KRW8 73 aa11.15□□□□□ -0.62
LSM1-203ENST00000520755 SPRY2O43597 315 aa11.15□□□□□ -0.62
LSM1-203ENST00000520755 S100A9P06702 114 aaKnown RBP11.15□□□□□ -0.62
LSM1-203ENST00000520755 SFTA3P0C7M3 94 aa11.15□□□□□ -0.62
LSM1-203ENST00000520755 ADCYAP1P18509 176 aa11.15□□□□□ -0.62
LSM1-203ENST00000520755 LEPP41159 167 aa11.15□□□□□ -0.62
LSM1-203ENST00000520755 CDKN1BP46527 198 aa11.15□□□□□ -0.62
LSM1-203ENST00000520755 BTN1A1Q13410 526 aa11.15□□□□□ -0.62
LSM1-203ENST00000520755 GFI1BQ5VTD9 330 aa11.15□□□□□ -0.62
LSM1-203ENST00000520755 Q6ZQT7 251 aa11.15□□□□□ -0.62
LSM1-203ENST00000520755 RNF183Q96D59 192 aa11.15□□□□□ -0.62
LSM1-203ENST00000520755 OVOL2Q9BRP0 275 aa11.15□□□□□ -0.62
LSM1-203ENST00000520755 MLST8Q9BVC4 326 aa11.15□□□□□ -0.62
LSM1-203ENST00000520755 C1QTNF4Q9BXJ3 329 aa11.15□□□□□ -0.62
LSM1-203ENST00000520755 C9JCJ5 164 aa11.14□□□□□ -0.63
LSM1-203ENST00000520755 ZNF80P51504 273 aaPredicted RBP11.14□□□□□ -0.63
LSM1-203ENST00000520755 COX8CQ7Z4L0 72 aa11.14□□□□□ -0.63
LSM1-203ENST00000520755 TMEM183AQ8IXX5 376 aa11.14□□□□□ -0.63
LSM1-203ENST00000520755 ZC2HC1AQ96GY0 325 aa11.14□□□□□ -0.63
LSM1-203ENST00000520755 SMIM7Q9BQ49 75 aa11.14□□□□□ -0.63
LSM1-203ENST00000520755 TP53TG1Q9Y2A0 90 aa11.14□□□□□ -0.63
LSM1-203ENST00000520755 TGP01266 2768 aa11.13□□□□□ -0.63
LSM1-203ENST00000520755 BAGE2Q86Y30 109 aa11.13□□□□□ -0.63
LSM1-203ENST00000520755 CSNK1G2-AS1Q8NCQ2 148 aa11.13□□□□□ -0.63
LSM1-203ENST00000520755 NDFIP1Q9BT67 221 aa11.13□□□□□ -0.63
LSM1-203ENST00000520755 ZFP30Q9Y2G7 519 aa11.13□□□□□ -0.63
LSM1-203ENST00000520755 C7orf71A4D174 169 aa11.12□□□□□ -0.63
LSM1-203ENST00000520755 ZNF727A8MUV8 499 aa11.12□□□□□ -0.63
LSM1-203ENST00000520755 K7EN84 100 aa11.12□□□□□ -0.63
LSM1-203ENST00000520755 TSPOP30536 169 aa11.12□□□□□ -0.63
LSM1-203ENST00000520755 GNG4P50150 75 aa11.12□□□□□ -0.63
LSM1-203ENST00000520755 CRIP1P50238 77 aa11.12□□□□□ -0.63
LSM1-203ENST00000520755 SAPCD1Q5SSQ6 148 aa11.12□□□□□ -0.63
LSM1-203ENST00000520755 SLC7A5P1Q8MH63 180 aa11.12□□□□□ -0.63
LSM1-203ENST00000520755 C1orf158Q8N1D5 194 aa11.12□□□□□ -0.63
LSM1-203ENST00000520755 NBEAL2Q6ZNJ1 2754 aa11.12□□□□□ -0.63
LSM1-203ENST00000520755 TMEM218A2RU14 115 aa11.11□□□□□ -0.63
LSM1-203ENST00000520755 GCGP01275 180 aa11.11□□□□□ -0.63
LSM1-203ENST00000520755 INSP01308 110 aa11.11□□□□□ -0.63
LSM1-203ENST00000520755 AMBPP02760 352 aa11.11□□□□□ -0.63
LSM1-203ENST00000520755 GPX1P07203 203 aa11.11□□□□□ -0.63
LSM1-203ENST00000520755 SMUG1Q53HV7 270 aa11.11□□□□□ -0.63
LSM1-203ENST00000520755 SOHLH1Q5JUK2 328 aa11.11□□□□□ -0.63
LSM1-203ENST00000520755 Q6AWC8 147 aa11.11□□□□□ -0.63
LSM1-203ENST00000520755 OR11H2Q8NH07 326 aa11.11□□□□□ -0.63
LSM1-203ENST00000520755 TENM3Q9P273 2699 aa11.1□□□□□ -0.63
LSM1-203ENST00000520755 IGHV3OR16-12A0A075B7B8 117 aa11.1□□□□□ -0.63
LSM1-203ENST00000520755 TRAV12-3A0A0B4J271 114 aa11.1□□□□□ -0.63
LSM1-203ENST00000520755 ZNF324O75467 553 aaPredicted RBP11.1□□□□□ -0.63
LSM1-203ENST00000520755 RNASE4P34096 147 aaKnown RBP11.1□□□□□ -0.63
LSM1-203ENST00000520755 OCC1Q8TAD7 63 aa11.1□□□□□ -0.63
LSM1-203ENST00000520755 SMIM12Q96EX1 92 aa11.1□□□□□ -0.63
LSM1-203ENST00000520755 C11orf21Q9P2W6 132 aa11.1□□□□□ -0.63
LSM1-203ENST00000520755 FAM74A3Q4VXF1 159 aa11.09□□□□□ -0.63
LSM1-203ENST00000520755 LINC01551Q86U37 167 aa11.09□□□□□ -0.63
LSM1-203ENST00000520755 SH2D1AO60880 128 aa11.08□□□□□ -0.64
LSM1-203ENST00000520755 OR5I1Q13606 314 aa11.08□□□□□ -0.64
LSM1-203ENST00000520755 ZNF705AQ6ZN79 300 aaPredicted RBP11.08□□□□□ -0.64
LSM1-203ENST00000520755 TMEM208Q9BTX3 173 aa11.08□□□□□ -0.64
LSM1-203ENST00000520755 NAT8Q9UHE5 227 aa11.08□□□□□ -0.64
LSM1-203ENST00000520755 GOLT1BQ9Y3E0 138 aa11.08□□□□□ -0.64
LSM1-203ENST00000520755 LY96Q9Y6Y9 160 aa11.08□□□□□ -0.64
LSM1-203ENST00000520755 PFN1P07737 140 aaKnown RBP11.07□□□□□ -0.64
LSM1-203ENST00000520755 MGST1P10620 155 aaKnown RBP11.07□□□□□ -0.64
LSM1-203ENST00000520755 RPL23P62829 140 aaKnown RBP11.07□□□□□ -0.64
LSM1-203ENST00000520755 C10orf91Q5T1B1 145 aa11.07□□□□□ -0.64
LSM1-203ENST00000520755 PRR27Q6MZM9 219 aa11.07□□□□□ -0.64
LSM1-203ENST00000520755 C20orf144Q9BQM9 153 aa11.07□□□□□ -0.64
LSM1-203ENST00000520755 SDF2L1Q9HCN8 221 aa11.07□□□□□ -0.64
LSM1-203ENST00000520755 X6R8D5 127 aa11.07□□□□□ -0.64
LSM1-203ENST00000520755 TRAV21A0A0B4J279 112 aa11.06□□□□□ -0.64
LSM1-203ENST00000520755 C19orf71A6NCJ1 209 aa11.06□□□□□ -0.64
LSM1-203ENST00000520755 PRM2P04554 102 aa11.06□□□□□ -0.64
LSM1-203ENST00000520755 NDUFA5Q16718 116 aa11.06□□□□□ -0.64
LSM1-203ENST00000520755 TMEM241Q24JQ0 296 aa11.06□□□□□ -0.64
LSM1-203ENST00000520755 FAM162BQ5T6X4 162 aa11.06□□□□□ -0.64
LSM1-203ENST00000520755 A0A0J9YWU9 116 aa11.05□□□□□ -0.64
LSM1-203ENST00000520755 F8W036 122 aa11.05□□□□□ -0.64
LSM1-203ENST00000520755 DEFB4AO15263 64 aa11.05□□□□□ -0.64
LSM1-203ENST00000520755 MUC21Q5SSG8 566 aa11.05□□□□□ -0.64
LSM1-203ENST00000520755 ZNF575Q86XF7 245 aa11.05□□□□□ -0.64
LSM1-203ENST00000520755 ISOC2Q96AB3 205 aa11.05□□□□□ -0.64
LSM1-203ENST00000520755 NIPSNAP3BQ9BS92 247 aa11.05□□□□□ -0.64
LSM1-203ENST00000520755 SEC11CQ9BY50 192 aa11.05□□□□□ -0.64
LSM1-203ENST00000520755 CARHSP1Q9Y2V2 147 aaKnown RBP11.05□□□□□ -0.64
LSM1-203ENST00000520755 IGKV3D-20A0A0C4DH25 116 aa11.04□□□□□ -0.64
LSM1-203ENST00000520755 IGHV4-28A0A0C4DH34 117 aa11.04□□□□□ -0.64
LSM1-203ENST00000520755 H7BYZ3 331 aa11.04□□□□□ -0.64
LSM1-203ENST00000520755 MIFP14174 115 aa11.04□□□□□ -0.64
LSM1-203ENST00000520755 ADIRFQ15847 76 aa11.04□□□□□ -0.64
LSM1-203ENST00000520755 ANXA2RQ3ZCQ2 193 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms