RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 CCDC140Q96MF4 163 aa7.87□□□□□ -1.15
MCF2-209ENST00000520602 DAZ1Q9NQZ3 744 aaKnown RBP7.87□□□□□ -1.15
MCF2-209ENST00000520602 MSRB1Q9NZV6 116 aa7.87□□□□□ -1.15
MCF2-209ENST00000520602 ZZEF1O43149 2961 aa7.87□□□□□ -1.15
MCF2-209ENST00000520602 PRRC2AP48634 2157 aaKnown RBP7.86□□□□□ -1.15
MCF2-209ENST00000520602 A0A1W2PRX2 142 aa7.86□□□□□ -1.15
MCF2-209ENST00000520602 C7orf71A4D174 169 aa7.86□□□□□ -1.15
MCF2-209ENST00000520602 PAX1P15863 534 aa7.86□□□□□ -1.15
MCF2-209ENST00000520602 PTTG1IPP53801 180 aa7.86□□□□□ -1.15
MCF2-209ENST00000520602 Q71RC1 249 aaPredicted RBP7.86□□□□□ -1.15
MCF2-209ENST00000520602 Q8N6K4 173 aa7.86□□□□□ -1.15
MCF2-209ENST00000520602 LAMTOR2Q9Y2Q5 125 aa7.86□□□□□ -1.15
MCF2-209ENST00000520602 OVOL1O14753 267 aa7.86□□□□□ -1.15
MCF2-209ENST00000520602 HBDP02042 147 aa7.86□□□□□ -1.15
MCF2-209ENST00000520602 Q5PR19 223 aa7.86□□□□□ -1.15
MCF2-209ENST00000520602 CD7P09564 240 aa7.86□□□□□ -1.15
MCF2-209ENST00000520602 MRPL51Q4U2R6 128 aaKnown RBP7.86□□□□□ -1.15
MCF2-209ENST00000520602 LINC00173Q6ZV60 143 aa7.86□□□□□ -1.15
MCF2-209ENST00000520602 TMEM190Q8WZ59 177 aa7.86□□□□□ -1.15
MCF2-209ENST00000520602 SNHG12Q9BXW3 62 aa7.86□□□□□ -1.15
MCF2-209ENST00000520602 UNQ9165/PRO28630Q6UXU0 137 aa7.85□□□□□ -1.15
MCF2-209ENST00000520602 C2CD3Q4AC94 2353 aa7.85□□□□□ -1.15
MCF2-209ENST00000520602 FOXE3Q13461 319 aa7.85□□□□□ -1.15
MCF2-209ENST00000520602 DMRTA1Q5VZB9 504 aa7.85□□□□□ -1.15
MCF2-209ENST00000520602 IGHV3OR16-12A0A075B7B8 117 aa7.85□□□□□ -1.15
MCF2-209ENST00000520602 VWC2LB2RUY7 222 aa7.85□□□□□ -1.15
MCF2-209ENST00000520602 NDUFA4O00483 81 aa7.85□□□□□ -1.15
MCF2-209ENST00000520602 TCF21O43680 179 aa7.85□□□□□ -1.15
MCF2-209ENST00000520602 GATA3P23771 443 aa7.85□□□□□ -1.15
MCF2-209ENST00000520602 PET117Q6UWS5 81 aa7.85□□□□□ -1.15
MCF2-209ENST00000520602 Q96MF0 132 aa7.85□□□□□ -1.15
MCF2-209ENST00000520602 TMEM160Q9NX00 188 aa7.85□□□□□ -1.15
MCF2-209ENST00000520602 TRAV12-3A0A0B4J271 114 aa7.84□□□□□ -1.15
MCF2-209ENST00000520602 PPBPP02775 128 aa7.84□□□□□ -1.15
MCF2-209ENST00000520602 PAX2Q02962 417 aa7.84□□□□□ -1.15
MCF2-209ENST00000520602 ERASQ7Z444 233 aa7.84□□□□□ -1.15
MCF2-209ENST00000520602 C14orf178Q8N769 122 aaPredicted RBP7.84□□□□□ -1.15
MCF2-209ENST00000520602 IFI27L1Q96BM0 104 aa7.84□□□□□ -1.15
MCF2-209ENST00000520602 LINC00477Q96M19 166 aa7.84□□□□□ -1.15
MCF2-209ENST00000520602 ZNF48Q96MX3 618 aaPredicted RBP7.84□□□□□ -1.15
MCF2-209ENST00000520602 FOXC2Q99958 501 aa7.84□□□□□ -1.15
MCF2-209ENST00000520602 C20orf144Q9BQM9 153 aa7.84□□□□□ -1.15
MCF2-209ENST00000520602 IGLV2-11P01706 119 aa7.84□□□□□ -1.15
MCF2-209ENST00000520602 ZNF80P51504 273 aaPredicted RBP7.84□□□□□ -1.15
MCF2-209ENST00000520602 TEX43Q6ZNM6 134 aa7.84□□□□□ -1.15
MCF2-209ENST00000520602 NPYP01303 97 aa7.84□□□□□ -1.15
MCF2-209ENST00000520602 CRIP1P50238 77 aa7.84□□□□□ -1.15
MCF2-209ENST00000520602 KALRNO60229 2985 aa7.84□□□□□ -1.15
MCF2-209ENST00000520602 MTORP42345 2549 aa7.84□□□□□ -1.15
MCF2-209ENST00000520602 LRBAP50851 2863 aa7.84□□□□□ -1.15
MCF2-209ENST00000520602 KLF5Q13887 457 aaPredicted RBP7.84□□□□□ -1.16
MCF2-209ENST00000520602 SIGLEC8Q9NYZ4 499 aa7.84□□□□□ -1.16
MCF2-209ENST00000520602 TACC2O95359 2948 aa7.83□□□□□ -1.16
MCF2-209ENST00000520602 TRAV26-2A0A0B4J265 109 aa7.83□□□□□ -1.16
MCF2-209ENST00000520602 A0A1B0GXF2 115 aa7.83□□□□□ -1.16
MCF2-209ENST00000520602 AJUBAQ96IF1 538 aa7.83□□□□□ -1.16
MCF2-209ENST00000520602 ZNF56Q15929 161 aa7.83□□□□□ -1.16
MCF2-209ENST00000520602 SMAD5-AS1Q9Y6J3 95 aa7.83□□□□□ -1.16
MCF2-209ENST00000520602 ANKRD17O75179 2603 aaKnown RBP7.83□□□□□ -1.16
MCF2-209ENST00000520602 TNFRSF6BO95407 300 aa7.83□□□□□ -1.16
MCF2-209ENST00000520602 IGLL1P15814 213 aa7.83□□□□□ -1.16
MCF2-209ENST00000520602 GATA1P15976 413 aaPredicted RBP7.83□□□□□ -1.16
MCF2-209ENST00000520602 TSPOP30536 169 aa7.83□□□□□ -1.16
MCF2-209ENST00000520602 NXT2Q9NPJ8 142 aaKnown RBP7.83□□□□□ -1.16
MCF2-209ENST00000520602 DCHS1Q96JQ0 3298 aa7.82□□□□□ -1.16
MCF2-209ENST00000520602 LINC00469Q8N7U9 141 aa7.82□□□□□ -1.16
MCF2-209ENST00000520602 HOXA3O43365 443 aaPredicted RBP7.82□□□□□ -1.16
MCF2-209ENST00000520602 IGLC3P0DOY3 106 aa7.82□□□□□ -1.16
MCF2-209ENST00000520602 LINC00310P59036 64 aa7.82□□□□□ -1.16
MCF2-209ENST00000520602 TMEM97Q5BJF2 176 aa7.82□□□□□ -1.16
MCF2-209ENST00000520602 Q6ZS46 218 aa7.82□□□□□ -1.16
MCF2-209ENST00000520602 IGHG2P01859 326 aa7.82□□□□□ -1.16
MCF2-209ENST00000520602 ESDP10768 282 aa7.82□□□□□ -1.16
MCF2-209ENST00000520602 OR4C5Q8NGB2 326 aa7.82□□□□□ -1.16
MCF2-209ENST00000520602 C2orf88Q9BSF0 95 aa7.82□□□□□ -1.16
MCF2-209ENST00000520602 YAE1D1Q9NRH1 226 aa7.82□□□□□ -1.16
MCF2-209ENST00000520602 RNF114Q9Y508 228 aa7.82□□□□□ -1.16
MCF2-209ENST00000520602 TRAV8-6A0A0B4J262 113 aa7.81□□□□□ -1.16
MCF2-209ENST00000520602 IGHV7-4-1A0A0J9YVY3 117 aa7.81□□□□□ -1.16
MCF2-209ENST00000520602 F8W735 103 aaPredicted RBP7.81□□□□□ -1.16
MCF2-209ENST00000520602 C12orf54Q6X4T0 127 aa7.81□□□□□ -1.16
MCF2-209ENST00000520602 STPG4Q8N801 248 aa7.81□□□□□ -1.16
MCF2-209ENST00000520602 ZFAND3Q9H8U3 227 aa7.81□□□□□ -1.16
MCF2-209ENST00000520602 ANXA2RQ3ZCQ2 193 aa7.81□□□□□ -1.16
MCF2-209ENST00000520602 SYT8Q8NBV8 401 aa7.81□□□□□ -1.16
MCF2-209ENST00000520602 TMEM158Q8WZ71 300 aa7.81□□□□□ -1.16
MCF2-209ENST00000520602 DUX3Q96PT4 197 aa7.81□□□□□ -1.16
MCF2-209ENST00000520602 SCGB3A1Q96QR1 104 aa7.81□□□□□ -1.16
MCF2-209ENST00000520602 SPOCK3Q9BQ16 436 aa7.81□□□□□ -1.16
MCF2-209ENST00000520602 ZNF256Q9Y2P7 627 aaPredicted RBP7.81□□□□□ -1.16
MCF2-209ENST00000520602 ACANP16112 2415 aa7.81□□□□□ -1.16
MCF2-209ENST00000520602 HIVEP2P31629 2446 aa7.8□□□□□ -1.16
MCF2-209ENST00000520602 TRAV12-2A0A075B6T6 113 aa7.8□□□□□ -1.16
MCF2-209ENST00000520602 KIR2DL5BA0A0G2JN68 375 aa7.8□□□□□ -1.16
MCF2-209ENST00000520602 KIR2DL5BA0A0G2JPC4 375 aa7.8□□□□□ -1.16
MCF2-209ENST00000520602 A6NDX4 124 aa7.8□□□□□ -1.16
MCF2-209ENST00000520602 NUTF2P61970 127 aaKnown RBP7.8□□□□□ -1.16
MCF2-209ENST00000520602 CYB5R2Q6BCY4 276 aa7.8□□□□□ -1.16
MCF2-209ENST00000520602 C16orf54Q6UWD8 224 aa7.8□□□□□ -1.16
MCF2-209ENST00000520602 KIR2DL5AQ8N109 375 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms