RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 G0S2P27469 103 aa0.23□□□□□ -2.37
NPM1-206ENST00000519955 DEFB132Q7Z7B7 95 aa0.23□□□□□ -2.37
NPM1-206ENST00000519955 ARL17AQ8IVW1 177 aa0.23□□□□□ -2.37
NPM1-206ENST00000519955 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.23□□□□□ -2.37
NPM1-206ENST00000519955 LXNQ9BS40 222 aa0.23□□□□□ -2.37
NPM1-206ENST00000519955 C19orf12Q9NSK7 152 aa0.23□□□□□ -2.37
NPM1-206ENST00000519955 ATPIF1Q9UII2 106 aa0.23□□□□□ -2.37
NPM1-206ENST00000519955 KNTC1P50748 2209 aa0.23□□□□□ -2.37
NPM1-206ENST00000519955 USP54Q70EL1 1684 aa0.23□□□□□ -2.37
NPM1-206ENST00000519955 SYNE1Q8NF91 8797 aaKnown RBP0.23□□□□□ -2.37
NPM1-206ENST00000519955 MAST4O15021 2626 aa0.22□□□□□ -2.37
NPM1-206ENST00000519955 SRP9P49458 86 aaKnown RBP0.22□□□□□ -2.37
NPM1-206ENST00000519955 GNG10P50151 68 aa0.22□□□□□ -2.37
NPM1-206ENST00000519955 RPL37P61927 97 aaKnown RBP0.22□□□□□ -2.37
NPM1-206ENST00000519955 LINC00208Q96KT6 92 aa0.22□□□□□ -2.37
NPM1-206ENST00000519955 FKBP11Q9NYL4 201 aa0.22□□□□□ -2.37
NPM1-206ENST00000519955 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.21□□□□□ -2.38
NPM1-206ENST00000519955 TRAV13-1A0A0B4J241 112 aa0.21□□□□□ -2.38
NPM1-206ENST00000519955 A0A1W2PRE2 83 aa0.21□□□□□ -2.38
NPM1-206ENST00000519955 FAM107AO95990 144 aa0.21□□□□□ -2.38
NPM1-206ENST00000519955 IGF2P01344 180 aa0.21□□□□□ -2.38
NPM1-206ENST00000519955 FXYD3Q14802 87 aa0.21□□□□□ -2.38
NPM1-206ENST00000519955 MORN4Q8NDC4 146 aa0.21□□□□□ -2.38
NPM1-206ENST00000519955 PCBD2Q9H0N5 130 aa0.21□□□□□ -2.38
NPM1-206ENST00000519955 TRBV7-6A0A0J9YX20 115 aa0.2□□□□□ -2.38
NPM1-206ENST00000519955 IFITM5A6NNB3 132 aa0.2□□□□□ -2.38
NPM1-206ENST00000519955 E7EQ34 232 aa0.2□□□□□ -2.38
NPM1-206ENST00000519955 H3BMG7 143 aa0.2□□□□□ -2.38
NPM1-206ENST00000519955 TEX29Q8N6K0 151 aa0.2□□□□□ -2.38
NPM1-206ENST00000519955 MRPL36Q9P0J6 103 aaKnown RBP0.2□□□□□ -2.38
NPM1-206ENST00000519955 NUP210Q8TEM1 1887 aaPredicted RBP0.2□□□□□ -2.38
NPM1-206ENST00000519955 NBDYA0A0U1RRE5 68 aa0.19□□□□□ -2.38
NPM1-206ENST00000519955 ZNF56Q15929 161 aa0.19□□□□□ -2.38
NPM1-206ENST00000519955 PPP1R2P3Q6NXS1 205 aa0.19□□□□□ -2.38
NPM1-206ENST00000519955 OR8J3Q8NGG0 315 aa0.19□□□□□ -2.38
NPM1-206ENST00000519955 MED31Q9Y3C7 131 aa0.19□□□□□ -2.38
NPM1-206ENST00000519955 BDP1A6H8Y1 2624 aa0.19□□□□□ -2.38
NPM1-206ENST00000519955 HIGD1CA8MV81 97 aa0.18□□□□□ -2.38
NPM1-206ENST00000519955 C5orf56Q8N8D9 126 aa0.18□□□□□ -2.38
NPM1-206ENST00000519955 FAM135BQ49AJ0 1406 aa0.18□□□□□ -2.38
NPM1-206ENST00000519955 GPR98Q8WXG9 6306 aa0.17□□□□□ -2.38
NPM1-206ENST00000519955 TMEM30CPA0ZSE6 113 aa0.17□□□□□ -2.38
NPM1-206ENST00000519955 TMEM189A5PLL7 270 aa0.17□□□□□ -2.38
NPM1-206ENST00000519955 SLC25A4P12235 298 aa0.17□□□□□ -2.38
NPM1-206ENST00000519955 ANK1P16157 1881 aa0.17□□□□□ -2.38
NPM1-206ENST00000519955 ETV6P41212 452 aa0.17□□□□□ -2.38
NPM1-206ENST00000519955 GTF2A1P52655 376 aaPredicted RBP0.17□□□□□ -2.38
NPM1-206ENST00000519955 LSM3P62310 102 aaKnown RBP0.17□□□□□ -2.38
NPM1-206ENST00000519955 HRCT1Q6UXD1 115 aa0.17□□□□□ -2.38
NPM1-206ENST00000519955 OR51A4Q8NGJ6 313 aa0.17□□□□□ -2.38
NPM1-206ENST00000519955 THEM6Q8WUY1 208 aa0.17□□□□□ -2.38
NPM1-206ENST00000519955 LOC101927531A0A1B0GV80 90 aa0.16□□□□□ -2.38
NPM1-206ENST00000519955 EDF1O60869 148 aaKnown RBP0.16□□□□□ -2.38
NPM1-206ENST00000519955 CRYGSP22914 178 aa0.16□□□□□ -2.38
NPM1-206ENST00000519955 BLCAPP62952 87 aa0.16□□□□□ -2.38
NPM1-206ENST00000519955 ASB16-AS1Q495Z4 193 aa0.16□□□□□ -2.38
NPM1-206ENST00000519955 COMMD3Q9UBI1 195 aa0.16□□□□□ -2.38
NPM1-206ENST00000519955 TPST1O60507 370 aa0.15□□□□□ -2.39
NPM1-206ENST00000519955 POLR2HP52434 150 aaKnown RBP0.15□□□□□ -2.39
NPM1-206ENST00000519955 DMAC1Q96GE9 116 aa0.15□□□□□ -2.39
NPM1-206ENST00000519955 SMIM7Q9BQ49 75 aa0.15□□□□□ -2.39
NPM1-206ENST00000519955 FXYD1O00168 92 aa0.14□□□□□ -2.39
NPM1-206ENST00000519955 RHOHQ15669 191 aa0.14□□□□□ -2.39
NPM1-206ENST00000519955 LYPD5Q6UWN5 251 aa0.14□□□□□ -2.39
NPM1-206ENST00000519955 CBLN4Q9NTU7 201 aa0.14□□□□□ -2.39
NPM1-206ENST00000519955 SYNE2Q8WXH0 6885 aaKnown RBP0.14□□□□□ -2.39
NPM1-206ENST00000519955 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.13□□□□□ -2.39
NPM1-206ENST00000519955 LOC107984640A0A0U1RRK4 108 aa0.13□□□□□ -2.39
NPM1-206ENST00000519955 TRAPPC2LQ9UL33 140 aa0.13□□□□□ -2.39
NPM1-206ENST00000519955 A2MP01023 1474 aa0.13□□□□□ -2.39
NPM1-206ENST00000519955 TANC2Q9HCD6 1990 aa0.12□□□□□ -2.39
NPM1-206ENST00000519955 A0A0G2JMM0 328 aa0.12□□□□□ -2.39
NPM1-206ENST00000519955 CDC42EP2O14613 210 aa0.12□□□□□ -2.39
NPM1-206ENST00000519955 HBDP02042 147 aa0.12□□□□□ -2.39
NPM1-206ENST00000519955 IDO2Q6ZQW0 420 aa0.12□□□□□ -2.39
NPM1-206ENST00000519955 NAT14Q8WUY8 206 aa0.12□□□□□ -2.39
NPM1-206ENST00000519955 ATG2AQ2TAZ0 1938 aa0.12□□□□□ -2.39
NPM1-206ENST00000519955 PGRMC1O00264 195 aaKnown RBP0.11□□□□□ -2.39
NPM1-206ENST00000519955 IGKCP01834 107 aa0.11□□□□□ -2.39
NPM1-206ENST00000519955 OR5A2Q8NGI9 324 aa0.11□□□□□ -2.39
NPM1-206ENST00000519955 OR9Q1Q8NGQ5 310 aa0.11□□□□□ -2.39
NPM1-206ENST00000519955 CENPHQ9H3R5 247 aa0.11□□□□□ -2.39
NPM1-206ENST00000519955 V9GYQ6 96 aa0.11□□□□□ -2.39
NPM1-206ENST00000519955 TRPM7Q96QT4 1865 aa0.1□□□□□ -2.39
NPM1-206ENST00000519955 A0A1B0GV72 72 aa0.1□□□□□ -2.39
NPM1-206ENST00000519955 CD3DP04234 171 aa0.1□□□□□ -2.39
NPM1-206ENST00000519955 IL7P13232 177 aa0.1□□□□□ -2.39
NPM1-206ENST00000519955 RPL7P18124 248 aaKnown RBP0.1□□□□□ -2.39
NPM1-206ENST00000519955 CKS2P33552 79 aa0.1□□□□□ -2.39
NPM1-206ENST00000519955 KLKP1Q107X0 134 aa0.1□□□□□ -2.39
NPM1-206ENST00000519955 TOMM20LQ6UXN7 152 aa0.1□□□□□ -2.39
NPM1-206ENST00000519955 ATG5Q9H1Y0 275 aa0.1□□□□□ -2.39
NPM1-206ENST00000519955 SMPXQ9UHP9 88 aa0.1□□□□□ -2.39
NPM1-206ENST00000519955 M0QZK8 103 aa0.09□□□□□ -2.4
NPM1-206ENST00000519955 RPL22P35268 128 aaKnown RBP0.09□□□□□ -2.4
NPM1-206ENST00000519955 BRK1Q8WUW1 75 aa0.09□□□□□ -2.4
NPM1-206ENST00000519955 IGHV1-24A0A0C4DH33 117 aa0.08□□□□□ -2.4
NPM1-206ENST00000519955 Q5XG85 94 aa0.08□□□□□ -2.4
NPM1-206ENST00000519955 OTOSQ8NHW6 89 aa0.08□□□□□ -2.4
NPM1-206ENST00000519955 TMEM14BQ9NUH8 114 aa0.08□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms