RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 OR5AP2Q8NGF4 316 aa3.8□□□□□ -1.8
CTNNA1-216ENST00000519489 SAT2Q96F10 170 aaPredicted RBP3.8□□□□□ -1.8
CTNNA1-216ENST00000519489 MGLLQ99685 303 aa3.8□□□□□ -1.8
CTNNA1-216ENST00000519489 SPXQ9BT56 116 aa3.8□□□□□ -1.8
CTNNA1-216ENST00000519489 A0A087WX48 190 aa3.79□□□□□ -1.8
CTNNA1-216ENST00000519489 METTL21EPA6NDL7 271 aa3.79□□□□□ -1.8
CTNNA1-216ENST00000519489 MEIS3P1A6NDR6 274 aa3.79□□□□□ -1.8
CTNNA1-216ENST00000519489 H0YIZ8 118 aa3.79□□□□□ -1.8
CTNNA1-216ENST00000519489 M0R3E3 92 aa3.79□□□□□ -1.8
CTNNA1-216ENST00000519489 GNRH2O43555 120 aa3.79□□□□□ -1.8
CTNNA1-216ENST00000519489 SEC11BP0C7V7 166 aa3.79□□□□□ -1.8
CTNNA1-216ENST00000519489 CYCSP99999 105 aaKnown RBP3.79□□□□□ -1.8
CTNNA1-216ENST00000519489 ELOBQ15370 118 aa3.79□□□□□ -1.8
CTNNA1-216ENST00000519489 LAIR2Q6ISS4 152 aa3.79□□□□□ -1.8
CTNNA1-216ENST00000519489 FAM219AQ8IW50 185 aa3.79□□□□□ -1.8
CTNNA1-216ENST00000519489 LGI3Q8N145 548 aa3.79□□□□□ -1.8
CTNNA1-216ENST00000519489 NANOGP1Q8N7R0 232 aa3.79□□□□□ -1.8
CTNNA1-216ENST00000519489 CHCHD7Q9BUK0 85 aa3.79□□□□□ -1.8
CTNNA1-216ENST00000519489 PDCD10Q9BUL8 212 aa3.79□□□□□ -1.8
CTNNA1-216ENST00000519489 TMEM147Q9BVK8 224 aa3.79□□□□□ -1.8
CTNNA1-216ENST00000519489 PRR34Q9NV39 138 aa3.79□□□□□ -1.8
CTNNA1-216ENST00000519489 POMPQ9Y244 141 aa3.79□□□□□ -1.8
CTNNA1-216ENST00000519489 A0A087WWC5 75 aa3.78□□□□□ -1.8
CTNNA1-216ENST00000519489 C5orf51A6NDU8 294 aa3.78□□□□□ -1.8
CTNNA1-216ENST00000519489 IFITM5A6NNB3 132 aa3.78□□□□□ -1.8
CTNNA1-216ENST00000519489 M0R2P5 195 aa3.78□□□□□ -1.8
CTNNA1-216ENST00000519489 PMP2P02689 132 aa3.78□□□□□ -1.8
CTNNA1-216ENST00000519489 GPX1P07203 203 aa3.78□□□□□ -1.8
CTNNA1-216ENST00000519489 GPX4P36969 197 aaPredicted RBP3.78□□□□□ -1.8
CTNNA1-216ENST00000519489 RPS10P46783 165 aaKnown RBP3.78□□□□□ -1.8
CTNNA1-216ENST00000519489 AKR1C2P52895 323 aa3.78□□□□□ -1.8
CTNNA1-216ENST00000519489 BAK1Q16611 211 aa3.78□□□□□ -1.8
CTNNA1-216ENST00000519489 TRIM16LQ309B1 348 aa3.78□□□□□ -1.8
CTNNA1-216ENST00000519489 ACOT7LQ6ZUV0 252 aa3.78□□□□□ -1.8
CTNNA1-216ENST00000519489 LINC00173Q6ZV60 143 aa3.78□□□□□ -1.8
CTNNA1-216ENST00000519489 PHF5AQ7RTV0 110 aaKnown RBP3.78□□□□□ -1.8
CTNNA1-216ENST00000519489 C14orf178Q8N769 122 aaPredicted RBP3.78□□□□□ -1.8
CTNNA1-216ENST00000519489 BORCS5Q969J3 196 aa3.78□□□□□ -1.8
CTNNA1-216ENST00000519489 AUNIPQ9H7T9 357 aa3.78□□□□□ -1.8
CTNNA1-216ENST00000519489 SSR3Q9UNL2 185 aa3.78□□□□□ -1.8
CTNNA1-216ENST00000519489 CARHSP1Q9Y2V2 147 aaKnown RBP3.78□□□□□ -1.8
CTNNA1-216ENST00000519489 A0A087WWL8 130 aa3.77□□□□□ -1.81
CTNNA1-216ENST00000519489 PGPA6NDG6 321 aa3.77□□□□□ -1.81
CTNNA1-216ENST00000519489 CEBPZOSA8MTT3 80 aa3.77□□□□□ -1.81
CTNNA1-216ENST00000519489 CRPP02741 224 aa3.77□□□□□ -1.81
CTNNA1-216ENST00000519489 CXCL2P19875 107 aa3.77□□□□□ -1.81
CTNNA1-216ENST00000519489 INPP1P49441 399 aa3.77□□□□□ -1.81
CTNNA1-216ENST00000519489 ARL6IP1Q15041 203 aa3.77□□□□□ -1.81
CTNNA1-216ENST00000519489 MIAQ16674 131 aa3.77□□□□□ -1.81
CTNNA1-216ENST00000519489 SP6Q3SY56 376 aa3.77□□□□□ -1.81
CTNNA1-216ENST00000519489 GGNBP1Q5YKI7 109 aa3.77□□□□□ -1.81
CTNNA1-216ENST00000519489 LCN15Q6UWW0 184 aa3.77□□□□□ -1.81
CTNNA1-216ENST00000519489 LHFPL5Q8TAF8 219 aa3.77□□□□□ -1.81
CTNNA1-216ENST00000519489 LSM2Q9Y333 95 aaKnown RBP3.77□□□□□ -1.81
CTNNA1-216ENST00000519489 hCG_2014768A0A024R1R8 64 aa3.76□□□□□ -1.81
CTNNA1-216ENST00000519489 LOC100130705A0A1B0GUX0 176 aa3.76□□□□□ -1.81
CTNNA1-216ENST00000519489 SMIM30A4D0T7 59 aa3.76□□□□□ -1.81
CTNNA1-216ENST00000519489 PRSS46E5RG02 174 aa3.76□□□□□ -1.81
CTNNA1-216ENST00000519489 ANGP03950 147 aaKnown RBP3.76□□□□□ -1.81
CTNNA1-216ENST00000519489 FABP1P07148 127 aa3.76□□□□□ -1.81
CTNNA1-216ENST00000519489 SMIM18P0DKX4 95 aa3.76□□□□□ -1.81
CTNNA1-216ENST00000519489 IGLC2P0DOY2 106 aa3.76□□□□□ -1.81
CTNNA1-216ENST00000519489 FABP5Q01469 135 aa3.76□□□□□ -1.81
CTNNA1-216ENST00000519489 SLC50A1Q9BRV3 221 aa3.76□□□□□ -1.81
CTNNA1-216ENST00000519489 HIGD1AQ9Y241 93 aa3.76□□□□□ -1.81
CTNNA1-216ENST00000519489 TRAV18A0A075B6X5 111 aa3.75□□□□□ -1.81
CTNNA1-216ENST00000519489 IGKV2-40A0A087WW87 121 aaPredicted RBP3.75□□□□□ -1.81
CTNNA1-216ENST00000519489 GABARAPH6UMI1 98 aa3.75□□□□□ -1.81
CTNNA1-216ENST00000519489 CASQ2O14958 399 aaPredicted RBP3.75□□□□□ -1.81
CTNNA1-216ENST00000519489 CTDSPLO15194 276 aa3.75□□□□□ -1.81
CTNNA1-216ENST00000519489 GABARAPO95166 117 aa3.75□□□□□ -1.81
CTNNA1-216ENST00000519489 IGKV2D-40P01614 121 aaPredicted RBP3.75□□□□□ -1.81
CTNNA1-216ENST00000519489 AMTP48728 403 aa3.75□□□□□ -1.81
CTNNA1-216ENST00000519489 ZNF876PQ49A33 203 aa3.75□□□□□ -1.81
CTNNA1-216ENST00000519489 HIGD2BQ4VC39 106 aa3.75□□□□□ -1.81
CTNNA1-216ENST00000519489 KRTAP13-2Q52LG2 175 aa3.75□□□□□ -1.81
CTNNA1-216ENST00000519489 OR2T35Q8NGX2 323 aa3.75□□□□□ -1.81
CTNNA1-216ENST00000519489 MRPL53Q96EL3 112 aaKnown RBP3.75□□□□□ -1.81
CTNNA1-216ENST00000519489 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.75□□□□□ -1.81
CTNNA1-216ENST00000519489 ANAPC10Q9UM13 185 aa3.75□□□□□ -1.81
CTNNA1-216ENST00000519489 AP4S1Q9Y587 144 aa3.75□□□□□ -1.81
CTNNA1-216ENST00000519489 ORC6Q9Y5N6 252 aa3.75□□□□□ -1.81
CTNNA1-216ENST00000519489 ERICH4A6NGS2 130 aa3.74□□□□□ -1.81
CTNNA1-216ENST00000519489 TMEM262E9PQX1 116 aa3.74□□□□□ -1.81
CTNNA1-216ENST00000519489 CFDP00746 253 aaPredicted RBP3.74□□□□□ -1.81
CTNNA1-216ENST00000519489 NMBP08949 121 aa3.74□□□□□ -1.81
CTNNA1-216ENST00000519489 CFC1P0CG37 223 aa3.74□□□□□ -1.81
CTNNA1-216ENST00000519489 MGST1P10620 155 aaKnown RBP3.74□□□□□ -1.81
CTNNA1-216ENST00000519489 RAB5CP51148 216 aa3.74□□□□□ -1.81
CTNNA1-216ENST00000519489 RAB31Q13636 194 aa3.74□□□□□ -1.81
CTNNA1-216ENST00000519489 ZNF546Q86UE3 836 aa3.74□□□□□ -1.81
CTNNA1-216ENST00000519489 LINC00269Q8N2A0 174 aa3.74□□□□□ -1.81
CTNNA1-216ENST00000519489 LINC00337Q8N6G1 96 aa3.74□□□□□ -1.81
CTNNA1-216ENST00000519489 OR1S1Q8NH92 325 aa3.74□□□□□ -1.81
CTNNA1-216ENST00000519489 KRTAP2-2Q9BYT5 123 aa3.74□□□□□ -1.81
CTNNA1-216ENST00000519489 FAM107BQ9H098 131 aa3.74□□□□□ -1.81
CTNNA1-216ENST00000519489 C8orf4Q9NR00 106 aa3.74□□□□□ -1.81
CTNNA1-216ENST00000519489 PGPEP1LA6NFU8 196 aa3.73□□□□□ -1.81
CTNNA1-216ENST00000519489 HYPMO75409 117 aa3.73□□□□□ -1.81
CTNNA1-216ENST00000519489 NPSP0C0P6 89 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms