RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 ASB16-AS1Q495Z4 193 aa0.62□□□□□ -2.31
SKP1-205ENST00000519054 COQ5Q5HYK3 327 aa0.62□□□□□ -2.31
SKP1-205ENST00000519054 SPOPLQ6IQ16 392 aa0.62□□□□□ -2.31
SKP1-205ENST00000519054 SLC36A1Q7Z2H8 476 aa0.62□□□□□ -2.31
SKP1-205ENST00000519054 VMO1Q7Z5L0 202 aa0.62□□□□□ -2.31
SKP1-205ENST00000519054 SLC51BQ86UW2 128 aa0.62□□□□□ -2.31
SKP1-205ENST00000519054 ZNF439Q8NDP4 499 aa0.62□□□□□ -2.31
SKP1-205ENST00000519054 FGFR1OP2Q9NVK5 253 aa0.62□□□□□ -2.31
SKP1-205ENST00000519054 PAQR5Q9NXK6 330 aaPredicted RBP0.62□□□□□ -2.31
SKP1-205ENST00000519054 RSL24D1Q9UHA3 163 aaKnown RBP0.62□□□□□ -2.31
SKP1-205ENST00000519054 TIMM9Q9Y5J7 89 aa0.62□□□□□ -2.31
SKP1-205ENST00000519054 LHFPL6Q9Y693 200 aa0.62□□□□□ -2.31
SKP1-205ENST00000519054 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.61□□□□□ -2.31
SKP1-205ENST00000519054 TRAV26-2A0A0B4J265 109 aa0.61□□□□□ -2.31
SKP1-205ENST00000519054 HMSDA8MTL9 139 aa0.61□□□□□ -2.31
SKP1-205ENST00000519054 CREBL2O60519 120 aaPredicted RBP0.61□□□□□ -2.31
SKP1-205ENST00000519054 IGLV1-51P01701 117 aa0.61□□□□□ -2.31
SKP1-205ENST00000519054 C1QBP02746 253 aa0.61□□□□□ -2.31
SKP1-205ENST00000519054 SRP19P09132 144 aaKnown RBP0.61□□□□□ -2.31
SKP1-205ENST00000519054 OR5G3P0C626 314 aa0.61□□□□□ -2.31
SKP1-205ENST00000519054 FGF6P10767 208 aa0.61□□□□□ -2.31
SKP1-205ENST00000519054 MSNP26038 577 aaKnown RBP0.61□□□□□ -2.31
SKP1-205ENST00000519054 CSN1S1P47710 185 aa0.61□□□□□ -2.31
SKP1-205ENST00000519054 SPINT3P49223 89 aa0.61□□□□□ -2.31
SKP1-205ENST00000519054 NKX2-5P52952 324 aaPredicted RBP0.61□□□□□ -2.31
SKP1-205ENST00000519054 EMP1P54849 157 aa0.61□□□□□ -2.31
SKP1-205ENST00000519054 TCL1AP56279 114 aa0.61□□□□□ -2.31
SKP1-205ENST00000519054 FABP9Q0Z7S8 132 aa0.61□□□□□ -2.31
SKP1-205ENST00000519054 NNATQ16517 81 aa0.61□□□□□ -2.31
SKP1-205ENST00000519054 ARHGAP11BQ3KRB8 267 aa0.61□□□□□ -2.31
SKP1-205ENST00000519054 OGFRL1Q5TC84 451 aaPredicted RBP0.61□□□□□ -2.31
SKP1-205ENST00000519054 FAM173BQ6P4H8 233 aa0.61□□□□□ -2.31
SKP1-205ENST00000519054 C7orf65Q6ZTY9 151 aa0.61□□□□□ -2.31
SKP1-205ENST00000519054 FP248Q71RG6 208 aaPredicted RBP0.61□□□□□ -2.31
SKP1-205ENST00000519054 ANGPTL5Q86XS5 388 aa0.61□□□□□ -2.31
SKP1-205ENST00000519054 ACOT12Q8WYK0 555 aa0.61□□□□□ -2.31
SKP1-205ENST00000519054 ANKRD7Q92527 254 aa0.61□□□□□ -2.31
SKP1-205ENST00000519054 ROPN1LQ96C74 230 aa0.61□□□□□ -2.31
SKP1-205ENST00000519054 CNBD2Q96M20 576 aa0.61□□□□□ -2.31
SKP1-205ENST00000519054 OR4C12Q96R67 309 aa0.61□□□□□ -2.31
SKP1-205ENST00000519054 PLAC8Q9NZF1 115 aa0.61□□□□□ -2.31
SKP1-205ENST00000519054 TP73-AS1Q9UF72 201 aa0.61□□□□□ -2.31
SKP1-205ENST00000519054 FUT9Q9Y231 359 aa0.61□□□□□ -2.31
SKP1-205ENST00000519054 TGIF2-C20orf24A0A0A6YYL0 155 aa0.6□□□□□ -2.31
SKP1-205ENST00000519054 TRBV10-2A0A0K0K1G8 114 aa0.6□□□□□ -2.31
SKP1-205ENST00000519054 TRAPPC13A5PLN9 417 aa0.6□□□□□ -2.31
SKP1-205ENST00000519054 MEIS3P1A6NDR6 274 aa0.6□□□□□ -2.31
SKP1-205ENST00000519054 IGHV3-7P01780 117 aa0.6□□□□□ -2.31
SKP1-205ENST00000519054 HIST1H1EP10412 219 aaKnown RBP0.6□□□□□ -2.31
SKP1-205ENST00000519054 S100A7P31151 101 aa0.6□□□□□ -2.31
SKP1-205ENST00000519054 ZNF80P51504 273 aaPredicted RBP0.6□□□□□ -2.31
SKP1-205ENST00000519054 HIST1H4AP62805 103 aaKnown RBP0.6□□□□□ -2.31
SKP1-205ENST00000519054 SUPT4H1P63272 117 aaKnown RBP0.6□□□□□ -2.31
SKP1-205ENST00000519054 IFITM2Q01629 132 aa0.6□□□□□ -2.31
SKP1-205ENST00000519054 RPL18Q07020 188 aaKnown RBP0.6□□□□□ -2.31
SKP1-205ENST00000519054 PLCXD2Q0VAA5 305 aa0.6□□□□□ -2.31
SKP1-205ENST00000519054 OR2F1Q13607 317 aa0.6□□□□□ -2.31
SKP1-205ENST00000519054 PMAIP1Q13794 54 aa0.6□□□□□ -2.31
SKP1-205ENST00000519054 BATFQ16520 125 aa0.6□□□□□ -2.31
SKP1-205ENST00000519054 C12orf74Q32Q52 190 aa0.6□□□□□ -2.31
SKP1-205ENST00000519054 COX6B2Q6YFQ2 88 aa0.6□□□□□ -2.31
SKP1-205ENST00000519054 IQCF2Q8IXL9 164 aa0.6□□□□□ -2.31
SKP1-205ENST00000519054 TBC1D19Q8N5T2 526 aa0.6□□□□□ -2.31
SKP1-205ENST00000519054 ZNF676Q8N7Q3 588 aa0.6□□□□□ -2.31
SKP1-205ENST00000519054 SLC35B4Q969S0 331 aa0.6□□□□□ -2.31
SKP1-205ENST00000519054 EFCAB1Q9HAE3 211 aa0.6□□□□□ -2.31
SKP1-205ENST00000519054 FKBP14Q9NWM8 211 aa0.6□□□□□ -2.31
SKP1-205ENST00000519054 CMTM6Q9NX76 183 aa0.6□□□□□ -2.31
SKP1-205ENST00000519054 IL36BQ9NZH7 164 aa0.6□□□□□ -2.31
SKP1-205ENST00000519054 DSPPQ9NZW4 1301 aa0.6□□□□□ -2.31
SKP1-205ENST00000519054 KCNK1O00180 336 aa0.59□□□□□ -2.31
SKP1-205ENST00000519054 MRPS14O60783 128 aaKnown RBP0.59□□□□□ -2.31
SKP1-205ENST00000519054 DCTN3O75935 186 aa0.59□□□□□ -2.31
SKP1-205ENST00000519054 IGKV1-5P01602 117 aa0.59□□□□□ -2.31
SKP1-205ENST00000519054 PRM2P04554 102 aa0.59□□□□□ -2.31
SKP1-205ENST00000519054 TRGC1P0CF51 173 aa0.59□□□□□ -2.31
SKP1-205ENST00000519054 SULT1A3P0DMM9 295 aa0.59□□□□□ -2.31
SKP1-205ENST00000519054 SULT1A4P0DMN0 295 aa0.59□□□□□ -2.31
SKP1-205ENST00000519054 UCHL3P15374 230 aa0.59□□□□□ -2.31
SKP1-205ENST00000519054 AKR1C3P42330 323 aa0.59□□□□□ -2.31
SKP1-205ENST00000519054 AP2S1P53680 142 aaPredicted RBP0.59□□□□□ -2.31
SKP1-205ENST00000519054 MAGOHP61326 146 aaKnown RBP0.59□□□□□ -2.31
SKP1-205ENST00000519054 CCL20P78556 96 aa0.59□□□□□ -2.31
SKP1-205ENST00000519054 CAV1Q03135 178 aa0.59□□□□□ -2.31
SKP1-205ENST00000519054 IMPG1Q17R60 797 aa0.59□□□□□ -2.31
SKP1-205ENST00000519054 KRTAP20-2Q3LI61 65 aa0.59□□□□□ -2.31
SKP1-205ENST00000519054 DHFR2Q86XF0 187 aa0.59□□□□□ -2.31
SKP1-205ENST00000519054 DEFB106AQ8N104 65 aa0.59□□□□□ -2.31
SKP1-205ENST00000519054 MBD3L1Q8WWY6 194 aa0.59□□□□□ -2.31
SKP1-205ENST00000519054 LYSMD1Q96S90 227 aa0.59□□□□□ -2.31
SKP1-205ENST00000519054 C11orf68Q9H3H3 251 aaKnown RBP0.59□□□□□ -2.31
SKP1-205ENST00000519054 GUCA1BQ9UMX6 200 aa0.59□□□□□ -2.31
SKP1-205ENST00000519054 TRBV20OR9-2A0A075B6H5 130 aa0.58□□□□□ -2.32
SKP1-205ENST00000519054 GGT3PA6NGU5 568 aa0.58□□□□□ -2.32
SKP1-205ENST00000519054 ORC5O43913 435 aa0.58□□□□□ -2.32
SKP1-205ENST00000519054 CRPP02741 224 aa0.58□□□□□ -2.32
SKP1-205ENST00000519054 SHBGP04278 402 aa0.58□□□□□ -2.32
SKP1-205ENST00000519054 CALB1P05937 261 aa0.58□□□□□ -2.32
SKP1-205ENST00000519054 HIST1H1TP22492 207 aaPredicted RBP0.58□□□□□ -2.32
SKP1-205ENST00000519054 FXYD2P54710 66 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms