RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 LEPP41159 167 aa11.27□□□□□ -0.61
TRAPPC9-205ENST00000518839 FOXA3P55318 350 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC9-205ENST00000518839 CMC4P56277 68 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC9-205ENST00000518839 CD300EQ496F6 205 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC9-205ENST00000518839 CYSRT1A8MQ03 144 aa11.26□□□□□ -0.61
TRAPPC9-205ENST00000518839 F6UB75 175 aa11.26□□□□□ -0.61
TRAPPC9-205ENST00000518839 MT-ND6P03923 174 aa11.26□□□□□ -0.61
TRAPPC9-205ENST00000518839 ZNF705DP0CH99 300 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC9-205ENST00000518839 ZNF705BP0CI00 300 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC9-205ENST00000518839 ZNF80P51504 273 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC9-205ENST00000518839 LINC01559Q495D7 138 aa11.26□□□□□ -0.61
TRAPPC9-205ENST00000518839 APRG1Q8IVJ8 170 aa11.26□□□□□ -0.61
TRAPPC9-205ENST00000518839 NUP35Q8NFH5 326 aa11.26□□□□□ -0.61
TRAPPC9-205ENST00000518839 C2CD3Q4AC94 2353 aa11.25□□□□□ -0.61
TRAPPC9-205ENST00000518839 TRAV21A0A0B4J279 112 aa11.25□□□□□ -0.61
TRAPPC9-205ENST00000518839 SAP30O75446 220 aa11.25□□□□□ -0.61
TRAPPC9-205ENST00000518839 TRGC2P03986 189 aa11.25□□□□□ -0.61
TRAPPC9-205ENST00000518839 TSPOP30536 169 aa11.25□□□□□ -0.61
TRAPPC9-205ENST00000518839 ZFAND2AQ8N6M9 145 aa11.25□□□□□ -0.61
TRAPPC9-205ENST00000518839 BORCS7Q96B45 105 aa11.25□□□□□ -0.61
TRAPPC9-205ENST00000518839 CITED1Q99966 193 aa11.25□□□□□ -0.61
TRAPPC9-205ENST00000518839 GNB1LQ9BYB4 327 aa11.25□□□□□ -0.61
TRAPPC9-205ENST00000518839 TRAPPC1Q9Y5R8 145 aa11.25□□□□□ -0.61
TRAPPC9-205ENST00000518839 ORM1P02763 201 aa11.24□□□□□ -0.61
TRAPPC9-205ENST00000518839 GPX1P07203 203 aa11.24□□□□□ -0.61
TRAPPC9-205ENST00000518839 DEFB131AP59861 70 aa11.24□□□□□ -0.61
TRAPPC9-205ENST00000518839 ACTL10Q5JWF8 245 aa11.24□□□□□ -0.61
TRAPPC9-205ENST00000518839 LINC00482Q8N8I6 264 aa11.24□□□□□ -0.61
TRAPPC9-205ENST00000518839 SETXQ7Z333 2677 aaKnown RBP11.23□□□□□ -0.61
TRAPPC9-205ENST00000518839 A0A1B0GW15 77 aa11.23□□□□□ -0.61
TRAPPC9-205ENST00000518839 IGLV1-51P01701 117 aa11.23□□□□□ -0.61
TRAPPC9-205ENST00000518839 HLA-DQA1P01909 254 aa11.23□□□□□ -0.61
TRAPPC9-205ENST00000518839 S100A8P05109 93 aa11.23□□□□□ -0.61
TRAPPC9-205ENST00000518839 DEFB1P60022 68 aa11.23□□□□□ -0.61
TRAPPC9-205ENST00000518839 MRPL54Q6P161 138 aaKnown RBP11.23□□□□□ -0.61
TRAPPC9-205ENST00000518839 GTSF1Q8WW33 167 aa11.23□□□□□ -0.61
TRAPPC9-205ENST00000518839 MAP6D1Q9H9H5 199 aa11.23□□□□□ -0.61
TRAPPC9-205ENST00000518839 SNURFLB1AK76 121 aa11.22□□□□□ -0.61
TRAPPC9-205ENST00000518839 KLLNB2CW77 178 aa11.22□□□□□ -0.61
TRAPPC9-205ENST00000518839 SPINK4O60575 86 aa11.22□□□□□ -0.61
TRAPPC9-205ENST00000518839 HLA-DRB4P13762 266 aa11.22□□□□□ -0.61
TRAPPC9-205ENST00000518839 RIGQ13278 110 aa11.22□□□□□ -0.61
TRAPPC9-205ENST00000518839 PGLYRP4Q96LB8 373 aa11.22□□□□□ -0.61
TRAPPC9-205ENST00000518839 WNK1Q9H4A3 2382 aa11.22□□□□□ -0.61
TRAPPC9-205ENST00000518839 ZNF256Q9Y2P7 627 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC9-205ENST00000518839 HLA-DRB4X5D2U9 266 aa11.22□□□□□ -0.61
TRAPPC9-205ENST00000518839 A0A1B0GUT8 65 aa11.21□□□□□ -0.61
TRAPPC9-205ENST00000518839 A0A1B0GXF2 115 aa11.21□□□□□ -0.61
TRAPPC9-205ENST00000518839 A8MTW9 85 aa11.21□□□□□ -0.61
TRAPPC9-205ENST00000518839 S100A6P06703 90 aa11.21□□□□□ -0.61
TRAPPC9-205ENST00000518839 GZMBP10144 247 aa11.21□□□□□ -0.61
TRAPPC9-205ENST00000518839 CD33P20138 364 aa11.21□□□□□ -0.61
TRAPPC9-205ENST00000518839 INSL3P51460 131 aa11.21□□□□□ -0.61
TRAPPC9-205ENST00000518839 HBBP68871 147 aa11.21□□□□□ -0.61
TRAPPC9-205ENST00000518839 GDF5OSQ5U4N7 250 aa11.21□□□□□ -0.61
TRAPPC9-205ENST00000518839 ZFP82Q8N141 532 aa11.21□□□□□ -0.61
TRAPPC9-205ENST00000518839 FRZBQ92765 325 aa11.21□□□□□ -0.61
TRAPPC9-205ENST00000518839 FAM110AQ9BQ89 295 aa11.21□□□□□ -0.61
TRAPPC9-205ENST00000518839 NF1P21359 2839 aa11.21□□□□□ -0.62
TRAPPC9-205ENST00000518839 TMSB15BA0A087X1C1 80 aa11.2□□□□□ -0.62
TRAPPC9-205ENST00000518839 F2Z2F3 143 aa11.2□□□□□ -0.62
TRAPPC9-205ENST00000518839 PHOX2AO14813 284 aa11.2□□□□□ -0.62
TRAPPC9-205ENST00000518839 CDKN1BP46527 198 aa11.2□□□□□ -0.62
TRAPPC9-205ENST00000518839 FABP9Q0Z7S8 132 aa11.2□□□□□ -0.62
TRAPPC9-205ENST00000518839 PRR9Q5T870 116 aa11.2□□□□□ -0.62
TRAPPC9-205ENST00000518839 TMEM136Q6ZRR5 245 aa11.2□□□□□ -0.62
TRAPPC9-205ENST00000518839 FER1L6-AS1Q8NA97 138 aa11.2□□□□□ -0.62
TRAPPC9-205ENST00000518839 CLUHP3Q96NS8 147 aa11.2□□□□□ -0.62
TRAPPC9-205ENST00000518839 MRPL18Q9H0U6 180 aaKnown RBP11.2□□□□□ -0.62
TRAPPC9-205ENST00000518839 C7orf71A4D174 169 aa11.19□□□□□ -0.62
TRAPPC9-205ENST00000518839 OR11H12B2RN74 326 aa11.19□□□□□ -0.62
TRAPPC9-205ENST00000518839 H3BMM0 161 aa11.19□□□□□ -0.62
TRAPPC9-205ENST00000518839 TRGC1P0CF51 173 aa11.19□□□□□ -0.62
TRAPPC9-205ENST00000518839 IGLC6P0CF74 106 aa11.19□□□□□ -0.62
TRAPPC9-205ENST00000518839 RNASE4P34096 147 aaKnown RBP11.19□□□□□ -0.62
TRAPPC9-205ENST00000518839 CTRLP40313 264 aa11.19□□□□□ -0.62
TRAPPC9-205ENST00000518839 RAB4BP61018 213 aa11.19□□□□□ -0.62
TRAPPC9-205ENST00000518839 IGKV3D-20A0A0C4DH25 116 aa11.18□□□□□ -0.62
TRAPPC9-205ENST00000518839 J3KRW8 73 aa11.18□□□□□ -0.62
TRAPPC9-205ENST00000518839 HIST1H2BKO60814 126 aa11.18□□□□□ -0.62
TRAPPC9-205ENST00000518839 HIST1H2BJP06899 126 aa11.18□□□□□ -0.62
TRAPPC9-205ENST00000518839 HIST1H2BOP23527 126 aa11.18□□□□□ -0.62
TRAPPC9-205ENST00000518839 HIST1H2BBP33778 126 aa11.18□□□□□ -0.62
TRAPPC9-205ENST00000518839 HIST1H2BDP58876 126 aa11.18□□□□□ -0.62
TRAPPC9-205ENST00000518839 HIST1H2BCP62807 126 aa11.18□□□□□ -0.62
TRAPPC9-205ENST00000518839 HIST2H2BEQ16778 126 aa11.18□□□□□ -0.62
TRAPPC9-205ENST00000518839 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC9-205ENST00000518839 C9orf66Q5T8R8 295 aa11.18□□□□□ -0.62
TRAPPC9-205ENST00000518839 HIST1H2BHQ93079 126 aa11.18□□□□□ -0.62
TRAPPC9-205ENST00000518839 KCNS1Q96KK3 526 aa11.18□□□□□ -0.62
TRAPPC9-205ENST00000518839 HIST1H2BNQ99877 126 aa11.18□□□□□ -0.62
TRAPPC9-205ENST00000518839 HIST1H2BMQ99879 126 aa11.18□□□□□ -0.62
TRAPPC9-205ENST00000518839 MCRIP2Q9BUT9 160 aaKnown RBP11.18□□□□□ -0.62
TRAPPC9-205ENST00000518839 KNCNA6PVL3 124 aa11.17□□□□□ -0.62
TRAPPC9-205ENST00000518839 MED14OSP0DP75 135 aa11.17□□□□□ -0.62
TRAPPC9-205ENST00000518839 KRTAP24-1Q3LI83 254 aa11.17□□□□□ -0.62
TRAPPC9-205ENST00000518839 ODF3L2Q3SX64 289 aa11.17□□□□□ -0.62
TRAPPC9-205ENST00000518839 LYZL1Q6UWQ5 148 aa11.17□□□□□ -0.62
TRAPPC9-205ENST00000518839 AMTNQ6UX39 209 aa11.17□□□□□ -0.62
TRAPPC9-205ENST00000518839 GATD1Q8NB37 220 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms