RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 GUCA2BQ16661 112 aa2.05□□□□□ -2.08
SKP1-204ENST00000517691 TMEM97Q5BJF2 176 aa2.05□□□□□ -2.08
SKP1-204ENST00000517691 PRSS54Q6PEW0 395 aa2.05□□□□□ -2.08
SKP1-204ENST00000517691 TOMM20LQ6UXN7 152 aa2.05□□□□□ -2.08
SKP1-204ENST00000517691 IL34Q6ZMJ4 242 aa2.05□□□□□ -2.08
SKP1-204ENST00000517691 SLC16A13Q7RTY0 426 aa2.05□□□□□ -2.08
SKP1-204ENST00000517691 EIF4E3Q8N5X7 224 aaKnown RBP2.05□□□□□ -2.08
SKP1-204ENST00000517691 OR10P1Q8NGE3 313 aa2.05□□□□□ -2.08
SKP1-204ENST00000517691 NARS2Q96I59 477 aaKnown RBP2.05□□□□□ -2.08
SKP1-204ENST00000517691 SMIM8Q96KF7 97 aa2.05□□□□□ -2.08
SKP1-204ENST00000517691 PGLYRP4Q96LB8 373 aa2.05□□□□□ -2.08
SKP1-204ENST00000517691 PFDN5Q99471 154 aa2.05□□□□□ -2.08
SKP1-204ENST00000517691 ZNF436Q9C0F3 470 aaPredicted RBP2.05□□□□□ -2.08
SKP1-204ENST00000517691 MED28Q9H204 178 aa2.05□□□□□ -2.08
SKP1-204ENST00000517691 DAZ1Q9NQZ3 744 aaKnown RBP2.05□□□□□ -2.08
SKP1-204ENST00000517691 MRPL36Q9P0J6 103 aaKnown RBP2.05□□□□□ -2.08
SKP1-204ENST00000517691 NOTCH1P46531 2555 aa2.05□□□□□ -2.08
SKP1-204ENST00000517691 IGKV3-7A0A075B6H7 116 aa2.04□□□□□ -2.08
SKP1-204ENST00000517691 IGHV3-66A0A0C4DH42 116 aa2.04□□□□□ -2.08
SKP1-204ENST00000517691 TEX48A0A1B0GUV7 120 aa2.04□□□□□ -2.08
SKP1-204ENST00000517691 WI2-2373I1.2A0A1W2PRP0 233 aa2.04□□□□□ -2.08
SKP1-204ENST00000517691 FAM24AA6NFZ4 105 aa2.04□□□□□ -2.08
SKP1-204ENST00000517691 K7EPK0 472 aa2.04□□□□□ -2.08
SKP1-204ENST00000517691 PLXNB1O43157 2135 aa2.04□□□□□ -2.08
SKP1-204ENST00000517691 CST7O76096 145 aa2.04□□□□□ -2.08
SKP1-204ENST00000517691 IFNA1P01562 189 aa2.04□□□□□ -2.08
SKP1-204ENST00000517691 IGKV1-17P01599 117 aa2.04□□□□□ -2.08
SKP1-204ENST00000517691 IGLV1-51P01701 117 aa2.04□□□□□ -2.08
SKP1-204ENST00000517691 SCGB1A1P11684 91 aa2.04□□□□□ -2.08
SKP1-204ENST00000517691 CXCL3P19876 107 aa2.04□□□□□ -2.08
SKP1-204ENST00000517691 NPPCP23582 126 aa2.04□□□□□ -2.08
SKP1-204ENST00000517691 H2BFSP57053 126 aa2.04□□□□□ -2.08
SKP1-204ENST00000517691 TAS2R30P59541 319 aa2.04□□□□□ -2.08
SKP1-204ENST00000517691 DEFB114Q30KQ6 69 aa2.04□□□□□ -2.08
SKP1-204ENST00000517691 KPRPQ5T749 579 aaPredicted RBP2.04□□□□□ -2.08
SKP1-204ENST00000517691 MORN5Q5VZ52 161 aa2.04□□□□□ -2.08
SKP1-204ENST00000517691 LCN12Q6JVE5 192 aa2.04□□□□□ -2.08
SKP1-204ENST00000517691 GTSCR1Q86UQ5 136 aa2.04□□□□□ -2.08
SKP1-204ENST00000517691 C6orf223Q8N319 242 aa2.04□□□□□ -2.08
SKP1-204ENST00000517691 BLNKQ8WV28 456 aa2.04□□□□□ -2.08
SKP1-204ENST00000517691 TMEM190Q8WZ59 177 aa2.04□□□□□ -2.08
SKP1-204ENST00000517691 LINC00477Q96M19 166 aa2.04□□□□□ -2.08
SKP1-204ENST00000517691 METTL26Q96S19 204 aa2.04□□□□□ -2.08
SKP1-204ENST00000517691 GINS3Q9BRX5 216 aa2.04□□□□□ -2.08
SKP1-204ENST00000517691 PBDC1Q9BVG4 233 aa2.04□□□□□ -2.08
SKP1-204ENST00000517691 RHPN1-AS1Q9BWJ2 59 aa2.04□□□□□ -2.08
SKP1-204ENST00000517691 SLC25A39Q9BZJ4 359 aaPredicted RBP2.04□□□□□ -2.08
SKP1-204ENST00000517691 VSIRQ9H7M9 311 aa2.04□□□□□ -2.08
SKP1-204ENST00000517691 MRPL27Q9P0M9 148 aaKnown RBP2.04□□□□□ -2.08
SKP1-204ENST00000517691 VAX2Q9UIW0 290 aa2.04□□□□□ -2.08
SKP1-204ENST00000517691 PKIGQ9Y2B9 76 aa2.04□□□□□ -2.08
SKP1-204ENST00000517691 IGLV5-37A0A075B6J1 123 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 IGHV7-4-1A0A0J9YVY3 117 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 IZUMO1RA6ND01 250 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 A8MWP6 167 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 DNASE2O00115 360 aaPredicted RBP2.03□□□□□ -2.08
SKP1-204ENST00000517691 DEDDO75618 318 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 IL4P05112 153 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 IGLC1P0CG04 106 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 ORM2P19652 201 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 CXCL2P19875 107 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 RPL29P47914 159 aaKnown RBP2.03□□□□□ -2.08
SKP1-204ENST00000517691 YPEL3P61236 119 aaPredicted RBP2.03□□□□□ -2.08
SKP1-204ENST00000517691 LYZP61626 148 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 HBG1P69891 147 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 HBG2P69892 147 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 ZNF90Q03938 601 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 BAXQ07812 192 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 SLC38A11Q08AI6 406 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 EGFEM1PQ0D2K5 195 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 FCN2Q15485 313 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 LAMTOR1Q6IAA8 161 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 REG3GQ6UW15 175 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 TMEM14EPQ6UXP3 125 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 NRACQ8N912 160 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 OR2K2Q8NGT1 345 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 PPP1R1CQ8WVI7 109 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 CHCHD10Q8WYQ3 142 aaPredicted RBP2.03□□□□□ -2.08
SKP1-204ENST00000517691 MARC2Q969Z3 335 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 FAM19A4Q96LR4 140 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 NMES1Q9C002 83 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 SLC25A31Q9H0C2 315 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 TUBA4BQ9H853 241 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 RABAC1Q9UI14 185 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 CARHSP1Q9Y2V2 147 aaKnown RBP2.03□□□□□ -2.08
SKP1-204ENST00000517691 TNCP24821 2201 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 IGKV1D-37A0A075B6S9 117 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 A0A1W2PS18 150 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 IGSF23A1L1A6 192 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 RBFOX3A6NFN3 312 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 F8W036 122 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 K7EIL1 84 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 MPC2O95563 127 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 TOMM40O96008 361 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 OR5G3P0C626 314 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 GATA2P23769 480 aaPredicted RBP2.03□□□□□ -2.08
SKP1-204ENST00000517691 CRYBB3P26998 211 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 S100A11P31949 105 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 EIF2B2P49770 351 aaKnown RBP2.03□□□□□ -2.08
SKP1-204ENST00000517691 IL15RAQ13261 267 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 174.1 ms